Contig Data
morexGenes
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Map Locations of contig_37375 (3539 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_37375

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52210 1 757 bp MLOC_52210.1 Available Available LOC_Os01g40730.1, FRAME:-1, EVALUE:8e-38, 13101.m04173 protein hypothetical protein





CDS Structure of MLOC_52210






Contig Sequence (3539 bp)

>contig_37375 3539 assembly3_WGSMorex_rbca.fasta
CGGCGACGGGTCCGACGTCGGCGGCGCGCGATTGGGGCGGGGCGTCGTGGGAGCAGGCGA
GGTGGTCGTGAGGAGTCGCCGGCGCACTGACCAAGCGGAGGCGGAGGGAGGTCGCCTACT
GGACTCGACCGACTCCGTCGGGTTCGCACCCCTGTCTCTGTGTGTGCGCGTCTGCCGCTT
GGGTCCACAGACGCCGGCACCGGGGTTGGTGTCGGAATATACCCCCCCCCCTCTCTCTCT
CTCTGCCGTTCGGTCCCACATAAAACAGTTCCCCTCAAATGCTCACCCTTTTCTACATAC
AAATGTCATCCAAGATCCGTTTTTGCTCAGTTATAATTCAAAATAGTGTTTTCATCGACA
TTTTGTACCCATCATCCTATAATCAGATATAGGGATTTCTCTCGCACAAAGGCTACTTGA
AGAGCTAAAAAAAATAATATATCAATCCAGTGATGGAACTTTTTTTTTCAAGGGAGGAAT
GATGGAGCTATTACTGAGAACAACGTGGAAGGGATTTCACGGGCTCACACACTTCCATCA
TTCCTCCCTAGTAGCCCAAGAGCCGGTGTCCCCGCCCTCAAGTGGTGCTACAATACTCAT
AAGAGCAACTCTAGCCCTTTCTCTAAAAACCGTTAAACCACTAGAAAACTATTTAGAACA
TTAAACTTTCTTTTTTGCAAATGGTAGGAGATAAACCCTTAGCTAGCCCTTCCTTTAAAA
ATTTGATCCGTAAAGGAATTGTACCGCCCTCCCACCACCACCGCAAAAAAAAGCCTAAAA
TTGCTCTGAAAACCCTCACTCTTAGTATTTTCTCTCTCTCTCTCTCTCTCNNTCTCTCTC
TCTCTCTCTCTCAATGGAATCCCCAATGGACACCCCCACCTACGTCAACCCCTTCCCTTG
ATGAAATTTCGCGAGTAGCGGCGAGAAGTGACGACAAGGGCCAATACTGCTCCTTCGCAT
CCTCCAACGTGTTCCACTCCCCCTATGTCGTCCTCTAAGGACGCCAAAAAGTGGCAACAC
GATAAGTGGCGACGAGGTGCCCAAGACAATGCTACAAGTGTATTTTCCTATTTGTTTTTG
CAATGCTTCAATTTGGTGATCAATCATGTGATGCCCATTACTAGCGATGTTTGTTGCTCT
TGTAGTACGAAAATGGAGCCGGATGAGATGGCGGATTTCAACACACCATTGGCCTCGAGG
ACATTGTGATGTCTATGGAGGATGAAAGTTAAGAAGAGAGAGGGAGTCTCGAAGTTGAGG
AGCTCAACACACAAACAATGAAGAAGGGGCAATCAAGGTTGGTCAACAACAAGACCGAGG
CGGATGTTGCACTGTGCGATGCTTGGATGAACATTCCTCTTGATACCTCGGAGGAGCCGA
TCAAACCAAGGACACTTTTTGGAGGAGGATATAGAATTACTACACAATCTATGTGTCCAT
TCCATCCAATCACGCACAAGGTTCCCTCGCCCATCATTGTGTTTTCCAAGATAATTGCAT
TCGATGGTCCATTTGTGTTGATCAAGTGAACCTAGACCTGCTGAGTGGAGTGCCAATAAA
CCAATATGAGTCTATCATCCAAGAGCTTTACAAGTAAAGGAACAAAACAAGTGGCAACAA
GGTCTTCTCTTTTCATCATTGTTACAAGGTGCTTCCGAAAATGAAAAGTGGGCTCGAAGA
ATCTATGATACAGTATTGAGGATGGAAAGATTGACCATATCTATTGATGTCGTCGCCGAA
GTGCTAGAAAACCTCCCACTCCCATCTCTCGGTCAGATGGACAAAATAACAAGAAGGAAA
ATAAAAGAAGTAGAATGGAGGAGTGGGAGCCTACATAGAAGCACCCGTTGCAATGATTAA
GATGAAGAGGGTATTGGCAACTAGCGCAAGGAGGAAAATATATTGAGGTGGATGGAGCTC
AAGATGATGGAGGAGGAAAGGTGGTGACCGAAGATAGAATGGTGCAATCATAGGAGTGTA
TGCTTACAATTGAGGATCTGACTTCCAATGGTGGCCAAGGAGAAGTTAAACAAGAGGAAG
ATGGAATAGCAACGACTTATAATAGAGATTGAGGACCTAGTCACCATAGTAAGGTCGAGG
AGCGCGTTATCATTTTGATGGATGCAAGCACGATGGATGAAACAACAGACAATATTGGTA
TATCACTCGTGGGAAGATCTTGCAAGATCAAGGTTCTACCCGAGTGCTGGTAGTGGTGGG
AGTGCATGATTTTGTGGAGTTCGATGATATATGCGCTGTGTGGTGGTTTTATGAACGGAT
TCATTGGCTTTTGGCTGAACTATGTTTATCTTTGCTGTTGAAATTGTTTAAGTTGGTGTT
GGAAATGCAATGCATTTGTTCATAATGCCCGTGCCATAGTTTAGAAGAAGTAGCAAAATA
TATTTTTGAGGGATTAAGTTTTAGGGGAAGGGCTATGTGCCAAAAAGTTTAATCCCTCAA
ATACATTTTAGGGGAAGACTAGAGTTGCTCTAACATGGCTCTTCCTTACATTAGTTACTC
TGCACAGTTACACTTTGCTAGATACATAATGCAACGTGGTTCAACTCCTGTTTTATTGTG
TACACAAGAGAACTTGTGCAAGCTCAAAATACAATAAAATTAGATAATGAATTTTACTTT
GATTCAATCGACATATGTGCCAGCTCAACCAGCCAAGTATAACAAACACTTGATTTGAAC
CAAACACACTACTTTTTCTCACTTGTCAAGGTATCTTGATCTACATAGCAATACACCATG
CAAACAAATTATAAGGATGCATCCAAATTAAAATGAAAATAGCGGAACTATTAAGAAGAT
AACAGAGGAACATGTTTGGGTTTCCACATGTCATATTACAAGGGTAGGCCACATAAAGGT
CAATACGTTCTCTCTTGTTTTCATGAGGTTCAGGCTATAAAAATATGATACTTCTGATGT
CTGCCTAAGAGGGCTTAAGAGGATAAATTCAACTGCTACTCATATACAATACCAAGAAAA
GCAGCAAACACTTTTTCATGATCTTTAGGATTTCAGCCAATGGCGACACTGTCAGAATGT
TGGAGCTGAGCTTCACTGACAATCCTTTGGAGCAAATATCACCCTCACGAAGAACTGGCC
ATACTCAAAGATTGAGTCATCAGGAGAAGTAACAGCTCCGACATGTTCATCTTGAAAAGT
CCACTGGAACACTGAACCGTTCACTTCTAAATAAACATGTAGTTCTTCATTTGCTTTCAC
CGCAACAATATGCTGGAACATTTTTTTGTCACCAAATAATTTGTCATCAAACAGCACAAC
TCCACGATGAGGATAGTCATCATATCCGGTGCTAAAAGCAGTGAACCTGACATGGTGAGG
ATGGTCAACCTTTGCATATACTTGTATTACAGCCTCGACACTTTCTGAAAGGACTTTGAA
TTTTAAGTCCAAATTGCAATTATCACCAGAAATCCGTGTATAAAACATGACATTAGCTTC
AGCACGAACATCAATCTCAGCATAGGCAGAAAATAGTTGCTTGTCATCTGATTCATCCC