| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
 |
Predicted Genes from contig_37358
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_52194 |
1 |
406 bp |
MLOC_52194.1 |
Available |
Available |
LOC_Os08g29600.1, FRAME:-3, EVALUE:7e-35, 13108.m03059 protein seed maturation protein PM41, putative, expressed |
| MLOC_52193 |
2 |
645 bp |
MLOC_52193.1 |
Available |
Available |
LOC_Os03g16940.1, FRAME:+2, EVALUE:1e-54, 13103.m02019 protein glyoxalase family protein, putative, expressed |
CDS Structure of MLOC_52194
CDS Structure of MLOC_52193
Contig Sequence (3741 bp)
>contig_37358 3741 assembly3_WGSMorex_rbca.fasta
CTTATGACTTATAAGTTGGGGTGACTTATAAGTTGGATCTGTTTGGTAAAATAAGTCACT
TTTTGCATTTTTCAACTTATAAGTTGATGACTTATTTGAAACCAAACTTGGCATTATTCC
ACTCCTTCAAAGTTACATTACATACTATAAGTACATCACAGTTTGTGATTCATAGATGGG
CTGCGCACAGCACGCCATGTTACAACAAGATTAGCAGTTAGCCTCGGCCCGTGCCTGTGA
CGCCTAGGTCGGGCTTGCCGTCCTCCGTGCCGGCGCCGAACACCGGGCCGCCCTTCCCAG
TGGCGTCCTCGACTTTCTCCTCCAGCATCTTCACCGGCAACCCATGATCGTCCTTGCTCG
ACCGTACCTCTGTTCTTGGCGGCTGATGCTGCTGGCACTCCTCCGCGCCGTCGGGAGCTG
CCGCCGACCTGTACGTGGTCGCCGTGAAAGCTCCCTTGGGCTGTGCGCCCTGGGCTCCAG
ACATGGCAATTTGATGGTGCTCGTATGTGGGTTGGACTCTGACGTTCGTCTTCGAGTTGG
CATCCCTGCTTCTTAAACTAGGACGTGGTCTGTGGCTACGTGCAGTGCCACCTACTGAGA
ATTCGGTGCTACGTGGCACCCATGTACGCGGGACCCCTGCACGTGTTTGCAGGAGCTTTC
GCGAGTTTGAAGAGATGGGCGAGGAAAAGAATCCGTCGCTTGCTCCTTGGAAACAAATAG
CCTACCTCTTAAAACTTTTGTCTGTGGAGCCGGTGCTCGGCAGGAACCTTGCCCAGTCCA
CGCGTGTCATCGAGAAGAAGGGTGGTAGATCTGCGACGTGGAGAGAAGAGTCGAGAACAC
TGCACGCATGCGCGCCACCTCTCAAGCTGCCGAGATTACGGGCCGCAATAAAAGGCAAAC
CACTGGCGAGAGCTGAGCGCCAGCTATCGAGAGAGCCAAGGAAGACACAACAACTCGAGG
CAAACACCGTGCCATCTGAAAGTGGTTACAAGGGACGAGCAATGGCGTCTGGGGCGGTGA
GACCTAAGCTCGCGTACATCGTGTGTTACGTCAAGGACGTGCCCAAGTCGGTCGCCTTCT
ACGCCGACGCCTTCGGCTACAACGTCCGCCGCGTCGACGACTCGCAGAAGTAATCCCCAT
CACCGTATGCATGCACCTAGGCCTACCCAAGCTGGCCGCCGGGGCAACCTGAGAATGACA
TGTGTGTGCATCGTCTGTTCTGTTCTGCGCGCAGGTGGGCGGAGCTGGACACCGGCTCGA
CGACCATCGCGTTCACGGCGCTGCACCAGAGGGAGACGGACGCGCTCACTGGCGAGGTGC
AGCTGCCCAAGTCGCCCCGCGAGCGAGGGCCCGTGGAGATCTGCTTCGACTACGACGACG
TCGACGCCGCGTACCGGCGGGCCGTGGAGAAAGGGGCGGTGCCGGTGAGCGCGCCGGAGC
AGAAGAACTGGGGGCAGAAGGTCGGCTACGTCAGGGATGTTGACGGGATCACCGTGCGCC
TTGGGAGCCACGTCCGCGAGTAGTGGCATACTTGCTCGTGTGTACTGTAATGACTGATGA
TCTACTCTGTCGATAGCAAATAAATCGTGATGACAGCAAGTTATCTACGCAAACTCAATT
CAGAACCATCAAAAATACATACTCCACGCAGGGCACTGGGCACCGCCGCAGGCAAAAATA
CATACTCCCTCCGTCACTGGCGTAGTTCATTTGCATTTATGCAAAAAAGGTCCTCTGATT
TTTAAACTTATTGCTAATTACACACCCCTTCTCCCGCGGCAGCACCGCCACCGCTGTGCC
CCAGCCACCGTCACGCGAGCAAGGCGCACCTGCGTCGCCGCCTGCATGGAGAAGAGATAC
GCCGGGGCGCATCCCTCGTCGCCCTGCTCGCGTCCCAGGCCCCGCTTCCTCGCGGCCGCG
GTTGCCAAGTCCCCGGCCGCTGTGATCCCCAATCCGACGCTGACGCCTGCACGAACTCGT
GCCGTGTCTGCCCGGCGTCCTCAGCGGCTCAGCCACGCCTCTGCTACTGTTGGTAGATGC
AGTAGTATATAAAATTGATCAGGAAAAGTTTAATCCGAAAGAATTTGTTAGTAGCAATCA
GACAAGATCATCACCCTTACAATTGGCATCAGAAGAAATTTCTGAAGTGTAATGATCAGT
TTGGTTTCAGTAAACTAGTTTACTAAATGTACAATTCCAGTAACAATAAACTTGTGAAAA
AATGATTTACTCAATCAGTCATATTGAAGATTTGCACTGAACTTGTTAACTGAACATGTT
CAGGAGCAAAAAAATGGTCAATACACCATTTGAGATCGAGATCAATACTCGGATATTCAT
GCCATTTGTTGAAAAAGGAGCAGAATATGCATGATTGACAAAAAGAGAGCCTTGAGTGAA
CATTCTTGCCATTTGTAAATATTGACAGTAAATAAGAATGAAAATTGTGAAATATAATAT
GTTGATATAAAGCATAGTTCAAAAGGTGCTAGACGTTAATTGTGCGTGTTTTGTAACCGT
CTTGCGGTTTTTATCAAAGCACATGCTTGTGCGTAGATTAAACGCAGTTATGCGTTAGGC
ATTTTGCTATCGTCTAGAGCCTAGACGTATTTAAGCACTTGCTTAGGCGCGTAACTGTGG
GTGTATGTAGTACTTACCTATGACCACCTTGAGACTTGACAATCATTTTTAACTGTACTC
CAGATTCGGTGTTCATTGGTCAGTTAACTGTACATCAAAATCAGTGTTCAGTACACTCCA
ACTTCAAAAAACATGCAAAACTTCCATATTCCTCGCTGAAGTGCACCTGGTGATGCCCTT
AGTAGAAATTTCAATCTTCCTCCCCACGCATGTGTTCTGTCACCTGACAAAATATAAATG
TGTTGTGTGTCATGTCTTGGGAATCCAATCAAAATATAAATGTGGAAGCAGAATTTTAGG
ATCAAGAATTCAGACCAACTTTAATTTCTCCACAGTGGTGTTCACCTTTGATGCATTTTA
ATTTTCAGAGTACTCCAATTGGCTGGATTTATCTTTCTTTTTTTAGAAAAGGAGGATGTA
CCCCGGCCTCTGCATCTGAACGATGCATGCAACCATTTAATTATTCAATAAAACCTTACA
AAGTAATACATCAGTAAGTCTCAGGGCACCATCTTGGTAACACATGCCGCTACTCCTATC
CCCTTGATGAAGGGATGACGAATGTTCGGGTCAAATAACAAACACACATCGCACCAAAGC
CTAACATCTAAAGCCGGATGCCTCATCCAAGCCACAACGCCGAGACTGGGTGACACACCG
GTCCGACGCACTCCCAGTGGGCACCAACGTATACGCTGCAAGGGCCTCACCACCGTCTTC
CATCGATCCATCCTCAAAGCAGCTACTAACGCATTGACCTTGCCATGCCTCTCTGCCATC
GACGTCACCACGACGCCACACAACGTCCTCCTCCTGCGCGAGTCCATCGCCACATATCAG
ACGCCGAGCCTCCACTGTTGCACGCCGTCGAGATCCACCGCCATGGATATGCAGGATGAA
GCACCGCTCCACCAAAGATGATATCCACTTGTCCCTCGAGCCCGCGTACACCTCCAAGAA
TAATGCCCCCAAGGAGGAAACGACACGAGAGTGTCGCCGTCATCCGATCTGCTGATCTAG
GGTTTCCCCCGGAGGTATTGGATGGAGTTAGGAGCTTCACCTCGATGATGCCTTCATGAA
GGAAACGACGATATGGACGCC
