Contig Data
morexGenes
Links



Map Locations of contig_37336 (5328 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_37336

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52174 3 2921 bp AK366148 Available Available None





CDS Structure of MLOC_52174






Contig Sequence (5328 bp)

>contig_37336 5328 assembly3_WGSMorex_rbca.fasta
TCCCTTGCGACGTTCCCCAACAGGTGGAGGCGGAGAAGCAAGCGAAGATGCTAGAGATCG
TGGCCACAAAAGCAGCCACCAAAGCAAGAGACGTCCGGCTCGCTTGCATGATGAAGGGGG
TTGATATCATGAAGGTGGACTTGAACACGGTCTTTTCGAGAAAGCGGTATTGATTCGAGA
AGATGCATGCCGACATGTTCAGCCTTGAAGACGAGTGATCCATGCTGTGGTTTGCGGGCA
TGACCACAACCGAAATGGCGTGGATGAACTACATTTTCATTTTGTGTGTTGGCGTGTGTA
CCGGCCCGTTCGCAAATGCGCCCAGCTAAAAAAACTGTGTATTCTTTTTATAGGCTGGCA
TATAATCGACGTGAACTCTTGAGGTTGGCATGATGATTGATTATAGGATATTTTAGCATC
AAAATTGTTTGCGTACGGACAAAAAATGAATCAGCACGTTAAACACACGATCGATTCATT
TGCAAATGAGGACGTACGAACCGGTCCAAACGCCATTTGGGTCGCCTCTTCGAGTTGCTC
TCATAGCTCGAGTGACGGCGCACCGGCGCACCAAAAATGCTACGCGTACGGGAACTTTTT
ACAGGAGTTTTACGGATTGGTTTTTCTCCTCACTAATCTCCTCTCCTGATTCTTGGGATG
GGGCCGCTTCATTGTGATCACCAATCAATACATTCTACTTTAACTCAGCCCGTAAAACTC
GTGTAAAACAAACTCCTGTACGTGTAGGATTGTCCCCGGCGCACAGTCATGCCGTAGTGC
GTGGCCCGTGGACAGAGAGACGGAGAGTCCCTACTGCGGTGCTGCCCCACAGCCGGCCAT
GAACTGAACCAAACTCCAAAAGCCCAAAGCACGTTGGGTCCGTAGGGCGGCGCTGCAACG
CAGACCGCGGTGGTGCAGCGACGGATCGGATAGCGCACTGGATGGATGGATGCAGCTCGT
GATGGACGTGGACCACCACAACCACGGGCGAGATTTGATAATGATCTGATAATGCTTTGG
CGTCACGCATGCTAATTGGGGGGAAAACCGCACGCCGAGCCCATCATCCATCTGCTCCTC
CTCTCCGTGTTCCTGGCCACATCCATCTTGCCCCTGGGTGGAAACTTTCTGCTAGATTTG
GCGGCCATCATTGATCGTGCTTAACTCAGTGGAGCGTTCACCCATCAAACACTGATCAAG
ATCGGCGCCCACCTCTCATTTGCGTTAGGCACCATTGCATTCCATTTGCATAACTGCAAC
GACTGCAGTACATCCGTGACCGTGAGTGGCGCCCACTAATAGCTCACGCGAGCACGATTA
TACCAAAAAGAAGGCTACTACACTTTGGGTATCCACTCGTCCCCCTGTATGAAGCTGGCG
ACGCTGTACACGTCGACGCGGTCCTTGGGCACCTGGCTGCTCCACGCCACCCGGCTTCGG
CCGGCGCCGGGGCCGGCGCTGCCGTACTCGCCGTAGTAGAGCGTGTCGAGCGCGAAGTCG
CCGCTCCATGGCATCCACCCGGCCGGCTGCACGATCTCGGCGAGCGTGCAGCCGACGAAC
ACGGTGCGCGAGTACTCCTTCCACGGCCGGCCGAGGAAGACGCGGTGCGCGCCGGGCTTC
TGCCGGTAGTATGCCATGTACTCGTCGCTGCCGTTGACGCGGCAGCCCCGGAGCACGATC
CCCGTGGGCTGCGCCGGGTCGGTGCGGCCCTGCGCCGTGAGCGCGTCCGTCTCGCCCTTC
TCCGGCCGCAGCTGCCGCGGCAGCACCACGACGTCGCTGTCGTGGAGCACGGCCGCCGAG
TTGCCGAAGATGAAGTCCACCGTGCCGGCCACGAGGCACCGGGTGTAGAACTGCCGCATG
GCGTGCGCGTACAGCGTGTCCTGGTGCCCCGCCAGCTCCACCGTGTCCAGCACCGTCCGG
TCGCCCGTCGACCGGAACGCCACCGCCTGGTGCGCGTCCGGCCCCGCCGTGTTCGCGATC
GTCAGGTCGCGCGCCATGAAGCCGTCCGCGAGCACGCCTGGACACATGAAAAAGGGCAAA
GTTACAACTTACTCCAACATGATCGATCACTGACAGTGACACTGTGTTGGCCGGGAAAAC
TCGCGGCCCGTGGCATGTGGGTCGCAGATTCGCCTGACAAAGTTAAAACTGTGGACCGTG
ATGCGACTTTCTCTTTGTGCAATGACTGGTCGAGTGGTCTGGACTGGAGCATTGTACGTC
GAAGCGTGTCTTTTTCTTGCTTGATAGAGCACGGGAAAGTTCGGTGTTTGGTTCACCCGT
GGTCCGCGTCGGCACGTCGCATTGTCGCTTCCGGCATGGGGGATCGCCGGACGCCGGTCA
AGTTAAAAATCTTAGAAACAGACTGGTTGTTGATTTTGTTTCGGGCCGCTGGAAATCATC
CAAAGTAATGAAGTATGTCATGGTTGGATTTTCATTTGGCTACCTAGATCACCGCATATG
GGATTTGTTTACGGAGATTATTGTTGCCATTTGGCTAAATATTTCCTTCCTAGTAATACT
AGCTGATCCAAAAATATTTCCTACTAAGTACAGTACGTAATAGCGTAATTGTACATGCTG
GTGTGACATGCCGGACGTAACGCAAAAAAGGTAAGAATTGATTATCCAGATCACAACATA
CTTGACGGGAAAGCGTTTTGGGTGCGGACAAAGAGCGATGGGGCGGCCGGTCGATCACGA
GCGGCGTCTTTAACGCCACCGGCATTGATTTCGTGAACGTAGTACGTGTACGATCGCGGT
GCAAACGATGCTGGCAAATATATACGTACAAACAAGAAAGAGTAAGTGCGAGCGACGCGT
GTACGCACCTACGGTGGCCGTGTTGAAGGTGGAGACGCCGGGCGTGTCGGCGTTGAGGTC
GCCGGTGATGACCGTCTTGCCCATGCCGTCGCCGACCAGCACCAGGTTGGTCTTCTCCCA
CGGCACGCTCACCGTCTCCTTGTACACGCCCTCCTTCACGCGCACCACGAACCGGTCGCC
CCCGTTGTCCGGCGCCGCCGCCACCGCCTCGCGCACCGTCTTGTAGTCGCACCCGGCGCC
GCACACCGTCGCGTCCGCGGGGAGCCCCTTGGGCACGCCGAGCGCGTCCACGTCGGCCTT
GGACGCCGCGGGCGGCGGCCAGTACCCGTCGCGCTCCGTCTGCGGCGGCGTCCAGCGGGA
CGTGTCGTCGCCGTACCGCTTCAGCGCGGCCAGCATGGAGATGTAGTTGCTGTTGACGGT
GATGGAGTCGTTGAGGTACGCCATGGCGTCCGAGATGGTCCGGGAGAAGTTGACGTACTT
GTAGGCGGACCAGCAGTCGTAGAGGTGGAGGAGCGCGGCGGAGGCGGGCATGAGCGCGGA
CGGCGAGGGCGGCGGCGAGAGGCGGCGCGAGGAGAGGGAGAGGGCGGTGAGGCAGTTGGT
GGCGGCGGCGGAGAGGTTGACGTTCTTGGAGGAGGCGAGGACGGAGCGCGCGGTGGAGAC
GGCCGGCGGGAGGCGGGCGCGGAGCGCGGAGAGCGTGGCGGCGAGGAGGTCGGAGGCGGA
GGACGCGGCGGTGGCGCTGGCGGCGGAGAGCGTGGCGACGCAGGCGGGCTGGAAGCGGGT
GGCGTTGCAGGCGAGGAGGACGGGGAGCGACGCCGCGTACTTGGCCGCCGGAGGAGGCGC
CGGGGCTTTGTGGTGGTGGGAGGAGAGGGCGGAGGGGAGGTGGAGGAGGAGGAGGAGGAG
GGTGAGGATGCGAAGGGGAGGAGGCATTGCTGAGTGTGGAATTGTGCGCAGTGGAGTGAG
TGTGTGGATGGCCGGCGTTGTGGGGGTTGTGGAGTTGGTTATATCGGCGCGCGCGAGAGA
GAGAGAGGGCAGCACGCCTGGTCAAGGCTTGGACTGGGTTGGGGAAGAAGGATCGTATTA
ATAGGGAAATTGAGTATATTTTTGTGACCAATTAGAATTTGGAAAGTCTTAATAAAGCTG
CAATGTAGAGAGAATTGATGCACGCAATGAAGAAAGATACCAAACAAATTCCATGGTGCA
AAGTGATTCAGTCTGATGCTGAGTTATTTTATTTTTGTATGGATATCCAAATAGTGGGTA
TGCAATTACTCATATTTGAAGTCTTTATCCAAGTATATTGTGTTCACCCATCATTTTGTC
CCTCTCTTCATCTCCCTCTCGATCATGTAAGTTGTGAGTGAGGTCAGCTTTGTGCTTGAT
TCCGACCACCCTTCTTCCTACTTCATTCATCGACGTTGTCCGTCAAAGAAGATTGGAAGG
AGGGGGGGGGGGTGCCCGTGCATGGTGTTACGATCCTTTTTTTTTCGTGCTTTTTTTTAT
GAGGCGGTCAAATCCGAAACATCCATGGTACTTCCTCAGCCTCCTCTTCCTCTCATCCAT
GGTGATGAACACGTGGAGAAAGTTAGAAGAAGCCCAATAGGTGACTCTTATGTTGGCACC
TTTTGTTTAGAACCATGGCGACCTATTGCTTCGTCCACCATAGTCCTCACAAACCCACAC
ATTTTTCTTTTTTTATTGGGGAGTTTTTTCTTGATGTCCGCGGGTGTCTCTGTGGGGACA
CTTTGATTCGCTCTTCAGCGAATCTCCGACTCAATGGAGAGGGATTGATGGAAGCGGGTC
TGGAAGTCGCTCCGACAATAAGCATGCCGTCCATGATCTTCTTCACGAAAGGGTGGAAGT
CGCTCCGATAATAAGCATGTCGTCCATGATCTTCTTCACGAAAGGGTGGCTCTTCGCTTG
TCCTTGGATCTTGGAGCCACCATGAAGGTGGGTAAATAGCTTAGGAGTTACATAGAGCTA
GTTTTTACAGGTTGTGCTGGAGGTAACATCGATGGCGATCATGAAGAATCTACCACACCT
CCTACGATAGTTGATTGTCGAGCTTCGTCATGATGGCATCAATCATCAACGGGGAAGCAA
CAAAGCTCCTACTCAAAGTCCATGACCTAATGTTTGTGGTGCTATGGAGGCCGTGGCGTA
CCAAGTGTTTCGTCTTCGGCGGCATCATGGTTGGTTCAGAGTGGAGGTGGATATGAACCC
AAACTACAGATTTCTACGTTGCTTGGGTGGTTTCCTATGGGTCCTGGCTATAAGGTGTAC
TCCTCCATCGCTTGGGTCCTTCTAGACATTCCCCTATTCAAAAAAGGAAATGTTTATCTA
ATGAATCTATATACCAATATAAAATACACAAATGATAGATCCAATCAACTTAATAAGTCT
ACTCCATTGTAGGAGTGAGTAAACATATTAACTGTTGGAAATATGCCCTAGNNNNNNNNN
NNNNNNNNNNNNNNNNNTATTTACTGTTTCAAGATAATCGTTTATTAT