Contig Data
morexGenes
Links



Map Locations of contig_37327 (6716 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_37327

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52161 2 1485 bp MLOC_52161.1 Available Available LOC_Os01g03914.1, FRAME:+1, EVALUE:0.0, 13101.m00345 protein cation efflux family protein, putative, expressed
MLOC_52162 1 750 bp MLOC_52162.1 Available Available None





CDS Structure of MLOC_52161






CDS Structure of MLOC_52162






Contig Sequence (6716 bp)

>contig_37327 6716 assembly3_WGSMorex_rbca.fasta
AAGAAGGGCCCGACAGGCGGGGGCCCCCCGCCCGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGGGGCCCCCCCCCCCCCCCCCTTGTGCACCCGATAGCTAGATTGCTTTGCTTGC
TTACCCCAAAAAAGGCCTGAAGCCGCGTCGCCGTGGCAGGTTCGCCGCGTGACGGCACAG
CTAGCTCTAGCTAGCCACGACGGAAGAGCCGCAGCGGTCGTCGTCAACTTGGCGTCGCCG
ACTTGATCGACACCGAAACGCACGCCGAAAGTCTCTTTGATTCCTCCATTCCAAGTAGCA
GATCCACCCCATAGATTTTTGCTTTTGCCTACGCGCGCAAAAGGCGTTGGTAGCCCGGCC
GTGTCGCCATGTTTAGCTAGCCCTCTTTCTCCTTTTTGTTGTCACCGTCCACGGCAAGCC
AGCCAGCAGCTGCTGCTACGACCGCGACACCACCCGGACCAGCAAGCAAAGCCACCGAGA
CGGCTCGGCACTTAAGTACGTGTGGGTAGCTCCACAACTGGTAACAACAGGCACCAAATA
TTTAGAAAGTCAGTTACGTGATCAGTCGAGGAACCTGTCAGCGCGCCAGGGGGAGCATGG
CGACGGCGGTTGGGCGCGAGGAGAGGGAGCCGCCGGCGGCGTCGTGGAGGCTGCGCATGG
GCAGCAGCGACGCCATGCGCGTCCCGGAGCGGCCGCCCTTCTTCGCCAGGCTCTTCGGCG
CCGCTTGCCCCTCCCACGGCGCCGGTGCGTTCCCCGCTCCTCTCTCGCATTCTTCTTCTT
CTTCTTCTTCTTCTTGGTAGCCAGCTACTCCATGCGTGCGTGCTCTGCTTCCTGAGTCAG
CTGCCATGTGTGCGCGACTACGATCGAGGTCCAACACTTGTTCTGATACGATCGAACACC
ATGCGCCCGATCGGTTCCATGTCATCCTCCATTTTCCTACCGGTGCCGATGCTTTTGTCA
CGCACGGGCCGCGGGATCCTACAGCTGCTCTGCTCTCTGACATGCACCTCAAATGGACGG
CTGCTTCCAGAGTTGCGGTTGTAACAGGCTCACAGCACCACGAAGAAGAGACTGAACATT
TCTACAGAGTTAGCGGTGCAGGTATTCGGAATTGTTTTCAGACTAGCAGGAGACCTTGCA
AATTTTCAGATAACTTTGATCGGCAAGTGAAGAACTATTCGCCCCTGTGTGTGCGTGCGT
GTTCTTCATTAGAACCCCGGTCGTTAGAGCATTGTTCCGGCATCATTTCCAGATTAGTAG
GAGATCTTGCAGCTGTTGGAGCGCATCCTATTCCTTTCTTTCCCTGCCTGGCCATGCCCA
TTGCCCGTTTTAAGAACGAAAACCACACGGTTCGGTCGCAAACAAGAAAGATGAGCGGCA
ATGTGTTCGACGACGGTCCTGGTTGATCACACTATTAGGTTGTGGTAGTAACATTGTTTA
ATTGGTCAGTTGGGTCTAACTCTGTTCCACTAGTGTGAGTGGCAGAGTCACGATTAGCAA
CAATTTGTCAGTGCAAATGACTCGACACTAGAATAGCATATCCCTGTTAACATGGTGGAC
CAATATTAAGCAACCTACTGCATTATTAACTGGATATAAGGAAATAAGCAATGGAGGGAG
AACCAAGAGTTGGTGGACCAAAGGGCAGAGGAAAGCTAGAGGAATAGTGTTGTCTCTAGC
AAGGTAAATCCAGGAGCCTAGGACAATTTGTCATGGGAGGAAAACTACGATCTCTCATTT
AGGCGAAGAACAACAGCCAAATTATGGATGGAAACAGACCGAAAACGGATGAGTGCTGCC
TTTTTTGTTCTCATTTTTTCCCTGGAACTGGAAACGTATACAGAAACCCTGGAAGCAGAT
ACAAACTCCGATAGTACCCGAAAGTGGTACGAGCTAAATTAGATACAAATTTGGATGTTT
GCAGAAACTAAAAGACCTGAATAATTGGGAAAAACGGAAGCAAACAACAAACTATTTCAA
TTTATATGACTAGACCGTATGTATTTCGGTGATCTCCTAAGGGGCTAGGGTGTGTGGTAT
GGCATGTTTGGTATATTGAAAGGGAAAAGGTAATTATCGTTCTGGTCGTTGAGCCACAAC
ATAGGTTTTATTGAGTGGTCTGGCCCACATGAGTCATGAAATAGCGGAAAGTTCTGTATT
TATTTAAACAGAATGTTGTTTCACCAGCCATTCCCTTTCTGTTTTTGTTTCCGCGTAAAA
AAATCTGTTTCTGTTTCCGTTCCGCTGCCTTCATATTTCCTCTCCGTTTTCATGTTTCTC
AAAAAATCAGGAAAAATTTCGCTCCTTTTTCATCCATAAGCAAATCACCTGAAGGCCTCT
TATATGGTCGAGTTACTGTACATCACATTATCTATTTATTTTTGTCGATAAACATATCTA
TTTATATAATAAAGATAAAAAATTATCAATACAATAAAATAATGGTAACATTCATATATT
ACTGAATTAGTGATGGCAAAAAAATGTGTTCCCAAGTTTAAAAAATGTTCACGTACTTAT
GAAAAATAATAATCAGATTTCAAGAAACTATTCGTATATTTATGTGACTGCGTGTGACTG
CAATTTGGATTCTATTATTCTCAAAGAGCGTAGAATAAGAGTTTCTCGGAAACTACCTCC
AACCTTCACTATTATCTGTAATGAAAATCACTTGACCTAGGATCCCTAAACATGTTGGAG
ACTGTACATGTCTTATTGTCCCTATCATCACTTGAATGTAGGGAATAACTAGTACTCCCT
CCGTTTCAGTTTANNNNNNNNNNNNNTGTATCTAGGTCGTCAATTTGACCAATTTAACGA
GAGACATATATTAGAAAAAATATATCATTAGAAACTTTAGATGTTCTATTTTCTAATCAT
ATAATTTTATGTTAAATAATACATTTTATATAAATCAAATTAATGACCTAGATACACGTG
CATGCCTTATAAACTATAACGGAGGGAGTAGTAGCACTGAATTCAATTGCACCGGTGGTA
CCGAAAACCATCTTGAGCATTTGATCAAACGCCAATCAAGGTTACTTTACCCTTTCGATG
TTCCCTAAAAAAAGGTTATTCATTTCAGGGAAACAAAGAAAAATCGCAAAGTACTACGAG
AAGCAGGAGAGTCTCCTGAAAGATTTCAGCGAGATGGAGAGCATGAATGAGCTCGGCTGC
TTGGATCAGAACGGTGCCCCTACCGACGTACAGATCCAGAATCCAATGTTAATTACATTA
CATGCGTAGTAAACAGCTTTCTAACAAACAGAAACAGTCGTAGCTGATGTTTGATACACA
CGTCCTCGATTTTGTCTTGATTAGGAAGAGCTGCGGCAACTGGCCAAGGGTGAAAGGCTG
GCGATCAACCTGTCCAATGTAATCAACCTGGTCCTGTTCGTCGGGAAAGTCGTGGCTTCC
TTCGAGACCAGGTCGATGGCGGTGATCGCGTCGACGCTGGACTCGCTGCTGGACCTCCTG
TCAGGGTTCATCCTCTGGTTCACGGCGCACGCCATGAAGAAGCCCAACAAGTACAGCTAC
CCGATCGGCAAGAGGCGCATGCAGCCAGTGGTATACACATATGCGATTCTTGTTGGAACC
GTGACCAAATTGTGCATTTGGAATGTTGATGAGTGATGACCATTTGCAGGGCATCGTGGT
GTTCGCGTCGGTGATGGGGTGCCTGGGGTTCCAGGTCCTGATCGAGTCTGGGCGGGAGCT
GGTGACGCAGGAGCACACCACGTTCGACACCTGGAAGGAGATGTGGATGGTGGGCAGCAT
GTCGTCGGTGGCCGTCGTCAAGTTCTTCCTCATGCTCTACTGCCGGACCTTCAAGAACGA
GATCGTCAGGGCGTACGCGCAGGACCACTTCTTCGACGTGATCACCAACTCCGTCGGCCT
CGTCAGCGCGCTCCTCGCCGTCAAGTACAAGTGGTGGATGGACCCCGTCGGCGCCATACT
GGTAAACAAACGAAACAAGATCGATCAAGGGGAACACAATCACCCAGAGATGTAGTATGA
ATGAACTGCATGCATGTGGTTGATGATCATCCACGGATGGATGCAGATCGCGCTGTACAC
GATCACGACGTGGGCGAGGACGGTGCTGGAGAACGTGGGGACGCTGATCGGGAGGTCGGC
GCCGGCGGAGTACCTGACCAAGCTCACGTACCTGATATGGAACCACCACGAGGAGATCCG
GCACATCGACACGGTGAGGGCCTACACCTTCGGGACGCACTACTTCGTGGAGGTGGACGT
GGTGCTGCCCGGGGACATGCCGCTCAGCCAGGCGCACGACATCGGGGAGGCGCTGCAGGA
GAAGCTGGAGCAGCTGCCGGAGGTGGAGCGCGCCTTCGTACACGTCGACTTCGAGTTCAC
ACACCGACCAGAGCACAAGGCCGACGTCTGATCTGATCTCATCTCATCATGCTCTTCTCC
TCAAATATGTGTATGTATGTATGGATGCTTGGGAAGTACTACTAGTTTGTAGGCACTTGT
GCAACACTTTTGACATGAAAGGTCATGTCGCGCGAGTATCCAATTCTAGGCCGGGCTCGG
CTGCACCTGGTGAACTTTAAAATCAACAAAATCCGATTTTCTTTTTGCATGAAAGATGGT
TGAATGGATGAGGTGCGTGTAAAATTTGAAGGGTTTGTGTAAGTCTCAGCCGACTTAGAC
TTAGACTTCGGGAAGTCTCAATCAGATGACGTCACCCAAAGTAGACTAGTAAACATGTGC
GTTACCAAAGTAGACTAGTACACACGTCTCATAAAGAATACACCTTCCAACGGACAAGGA
AGGCGATAGTTTGGCCCCCTCCCTTTGTCGTCAAGATAGTGGGTCCACTCCGTCATCCCA
AAATAATATGTCGTGTTCTCCTTTCACATTCAATGTGCTGTAGTGAACCCAAAAACTATT
GACAACTCACCATTCACATCACATTTCTATCTTATGACGAAAACTACAAAATCTATTAAT
CGTCATTAAAAGAGTTTACAATGTCCATTACAACCACCAAACTAACAAGATCAGGGTACT
CAGCTAACCAAGTTTATGAGCACCTAAATTTCTTACCAATGCCATTATTTCATGTACAAA
TTTATTGCTCTCTTCCTCATACACACAACTCCATCTAAAATAAAATCAGGTAACCCATTA
CGCAGGTGGTTCATGACTTCATATATGCGCCCTAAGTGGCACAAAAATCTGTTGTTGCCA
TTGAAGATATTGACAACATATGCATTATTAGATTACAAAACAACGAAGCAACAAGGACAT
CTGTCAGGAGCCAGGGACCGATTATGCACTCTCAGACTTGAGCTTCCACCATGTCGTGGC
ATCTTTAGATGTTCAGAGCAACAGCTAGTGCCACATGCTCTTTGTGGTTGTGATCACAGA
CATCAATACGGGTTTGGTCATTATTTTGCGAAGAAGAAGCATCGACATTTAACTTTGCCC
TGTTTTCATCTAGTATAGTGGCAATTTGCATCACTTATTTCCACAAAATCGATTTTGTTA
ACAATTGTCAGGAGGTCAAGTTTCCGCATCACTTTCCTTTGTCATATTGTGGGCGCTTCA
AATATTAACAATAGAAATAGCTGATTCGACCCCATCACAAAGTAAATACCAGTGCGTCCC
TATATGATCGATCAATTTCCTTGGAGCTTAACTATCTGAAACGAACAGTCAAAGTAATGG
CCTTGAGGGCATGTTTAGGACATCTTAGCCCATATGTTAATGTAGAAAAAGAATAAAGTT
CATATGAAGTAAGTATGTTAATAAGATAAAAATGAATTACCTTTGCGAATAGATTTGAAA
CCACAACTCTCTGATTCAAAACCACAATCTCCCACACTTACAACCTTCTCTGCCAAGCAA
AATATTAATATAGCTAAGGAAGATCAAGATAACTTAAAAACAAACAATAGGTTAATCAGT
ACTATCATAGAGATAGTAGCATTTTTCGATATCGGAAATTAGAAACCATCGATGATTTAG
TATGATTAACATATTTACAGGGGATGTGACCAATGTGTCATCTAGTCCTGATGTGCCGCA
AGTTTACTAAAAACAAAGAAATTGTTTGCATATAGATCACTCAATCTCTTCTTAAAAATA
ATGGTTGAAACTTTACTTTAAAAATGCAATGCTCGATCCCTTCCCTTTTCCAAGAACATG
GAGTAGAATTGTGTATAAATATATTATGTAGAGAATGTTACATCAACCTAATGAAGGTCG
ACAAAAGAAGCAACGGCAAAAAGTTCAAACTGTTGTGAAACAAAGGAAGACATGACCTGA
TACTAAACATTTTTGTCTCTTCAACAAAATATTGCCATGGATAAATCTAGCTATAACTAT
AAGTAACAGAAAATGATTCTTAAACCTTGTCATGCCAAAATATTGCCAAATTAAATAAAA
AAAATGAACTTTGCATATTGAAAATATCGATTCTTAAACTTGCAATTAATAAGAGCTCCA
ATTATACCCGTCATCCTAAAATATCACCGAATTCTATAAGAGGGATTGGACACAGAGCCG
CTCTATCTCTCCACATCTATTAATCTGACCACCACTCCTCTATTCATATAGCGTCCAAAT
ATGTTGTCAAAGATAGCAATAAGAGAAATGGAGGCAAGGTCAACATAGCACACATACTCA
TTTTCCATTGCCAAATAATTACATGAACTTTGTCCTAGACTCCATCCGCGCGCGGG