Contig Data
morexGenes
Links



Map Locations of contig_37322 (4360 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37322

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52153 3 3078 bp MLOC_52153.1 Available Available LOC_Os03g48180.1, FRAME:+1, EVALUE:0.0, 13103.m05198 protein peptide transporter PTR2, putative, expressed
MLOC_52154 2 1072 bp AK373583 Not available Available None





CDS Structure of MLOC_52153






CDS Structure of MLOC_52154






Contig Sequence (4360 bp)

>contig_37322 4360 assembly3_WGSMorex_rbca.fasta
AGGAACGGAGGGAGTATATATATAGTGGATTTTTTGTTCACCTTTTTTTTTATTATCGAA
CAATTCTGCTTACGTACGTTTTGGCCGAGTATGCACCAAAAATCTTTCATCATGGTGCGC
CCGGCCTAAATAATCGGCACCATGATGATGAGATGGGGGCGTGGCAAAGCCAAATCACGC
TTTGAAGGGAGCGGCGCGGGAGTGTAGTGTAGTGTAGTGTAGCCCATGATTGTGGTTCCA
CCAACCCAAACCCATATATTGTAGTGCCCTATGGTCGCTAATTAACGCGGCATGACCAAG
TGGCTAAGAGAGAGTACTGTCCTTTTCAAGCGAGTCACAGTGTCAAAGTCTAGAAGTTAA
ACCGCGGTGGGCTGGGATGATTTGATCCATGCATACACCTCATCCTGTCACGTGTCTATC
TATCTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGCAAGCGACGTGTACTGG
TACTATGTATTTGTCCTGGCAGCGGCTGACTGACTGCCTGCTAGTTGCATTGCACGGCCC
ACGGGCGGTCTTCGCCGCGGGCCGGAGACTTGGAGTGGGAAGGCAGCCGCCGTCAGCATT
GACCCAGCCCAACGCGGCGGCCACCGGCTGTCCTGTTCCGTGGAGAAAAATGGCGCGCAC
GCTCCAGGACACGCACATCTCCCTTGCCACGACAACGATCCGTGCCTTGTCCAGCAACAC
CCACCCACCCATCCAGCCACCCAGCAGCCCACGTTGCCGCGTCAATGTCAGCCGCCGCGC
TCGCCGCTCGCCGGCCAGTGGCCGCCCCCACCCCTGTCCCCGTCTCCACCACGAATCGGA
TCGTGGGAGAATAGTATCGCCGTTGGCCGGCTCCGCCGAGCTGCTGTGGCGGAAGCTTCT
CCGCTGCCTGGCTCACAACGACAGCCACTTGGGGGATCGTGCTCGGGCGTGCAGTGGGAT
ATGCACCCTGCCCAGCGCGCGCGCCGTGTCGTGTTCCCCCGGTGGTCACCACGGACACCG
GCACAGGCACAGTTCGTTTCGGGCCCCCGCGCGTGGGCGTGGGCGTGTGTGGTGTCTTGT
GCGTGCATGGCGAGGTGGGGGAAGGGGGGAGTGAAGGACGCTGTCGGGCTGCTGCCGGTT
GCTGCTGCTGGTTACACTGCAGCAGCAGCGCAGTTAACTCAGACTACTAATGCTACCATG
GATCGTGTTGCTTCGTTGCCTGCATGAACTGTGTAGTGTTTCATTTCTCTCCGGCGCTAG
CTGACGGCATGCTTGCCTGTTCCTCCCTCCCATTCCAGGGCATGTTCTTCCTGACGCTGA
CGGCGGGCGCGGACAGCCTGCACCCGGCGGACTGCGGTGTCGGCGAGGTGTGCCAGAAGG
CCAGCTCCTACCAGCTCGCCGTGCTCTTCATCTCCTTCGCCTTCCTCGTGATCGGGTCGG
CGGGGATCCGGCCGTGCAGCATGCCGTTCGGGGCGGACCAGTTCGACCCGCACACCGAGT
CGGGCAGGAGGGGGATCAACAGCTTCTTCAACTGGTACTACTTCACCTTCACCTCCGCCA
TGCTCGTCTCCGCCACCGTCATCATCTACGTGCAGAGCAACGTCAACTGGGCCATCGGCC
TCGGCATCCCGACGGCGCTCATGCTCCTCGCCTGCGTGCTCTTCTTCATGGGCACGCGCC
TCTACGTGCGCGTCATCCCAGAGGGCTCCCCCTTCACCACCATCGTGCAGGTGTTCGCCG
CCGCCTTCGCCAAGCGGTCCTTGAAGCAGCCCAAGGACCCCAAGCAGGACCTCTTCGACC
CGCCGCACACCAGCGCCATCGTCTCCAAGCTCACGCACACGGACCAGTTCCGGTGCCTCG
ACAAGGCCGCCATGGTGGCGGGCCCCGAGGAGGTGCGCTCCGGCGGCGCCGCCGCGGCCG
ACCCGTGGCGGCTCTGCACCGTGCAGCAGGTGGAGGAGGTGAAATGCCTCATCCGCATCG
TGCCCGTCTGGTCCACCGGGATCATCTACTACGTGGCCGTGGTGCAGCAGTCCACCTACG
TCGTCTTCTCCGCGCTGCAGTCCGACCGCCGCCTCGGCAGCAGCTTCCACGTCCCCGCGG
CGTCATTCACCGTCTTCGCCATGCTCGCGCAGACGCTCTGGATCCCCATCTACGACCGGC
TCCTGGTGCCCCGACTCAGGAAGGTGACCGGCAAGGACGAGGGCTTGACGCTGCTCCAGC
GCCAGGGCATCGGGATCGCGCTCTCCACCGTGGCCATGATCGTCTCGGCTGTCGTCGAGG
ACCGGCGGAGGGACATCGCGCTGAACCAGCCCAACATCGGCACGACGCAGACCGGGGGCG
GCATCTCCGCCATGTCCAGCTTCTGGATGGTGCCGCAGCTCATGATCCTCGGCCTCTCCG
AGGCATTCAACCTCATCAGCCAGATCGAGTTCTACTACAAGGAGATCCCGGAGCACATGC
GGAGCGTCGCCGGCGCGCTCGCCTTCTGCAACCTCGCGCTCGGCAACTACCTCAGCGGCT
TCCTCACGACGATCGTGCACCGGACCACCGGGGCGGGCCAGAACTGGCTGGCGCAGGACC
TCAACAAGGGCAGGCTAGACCTCTTCTACTGGATGATCGCCGGCATCGGCGTCTTCAACT
TCGTCTACTTCATGATCTGCGCCAGGTGGTACAGGTTCAAGGGCACCAGAGACGCCTGAG
CTTTGCACAACGATGCAATAGAATAAGGTCAGGTGATTAATTGGCGTGTCCTATACTTTG
TTGTTGTAATTTTTTGGTTCTGGTGTTGTGAAATCAATCAATCTATAGATGAAGTGGGTG
GGGAAAGAAAAGAAGAAAGATAGTAGGCAACAATGGCTGGTTAATTTCTTGTAAGTTGTT
AAAATGAAGGAAACAACAATGAGGTGGTTAATTTCTTGTAAGTTGTCCAAATCATATGAA
AGGTAAATGAATGTCTTTCACTGTACTTGTGGTTTCAGGCATATATATATATATATATAT
ATATATATGCCTTCAACTGTACTGTCATGACACAATGGAGACTCACATTTCCACTGTGTT
TTGCATTTGTGCGGACCGCTTGGTCGAAATGCAGCTAGCATGCCATTGAATGGTCGGCAT
CCATGAGCTGCTAACCTTCTGCCAAGCCACAGCCATCTCAAACAATGCATATCACAACAA
CGTCATGCTCTGTCCCAGGCATGGATCTTAGTAAGAACCATGGACAACTTTGTTATCATC
AGATATGTATGTACATCGTTACAAAGACACCGACGGCGAACCACCCCCAACCGTCAACCG
CCACCGGGGCATTTGGGCGCCCCGCTATGCTTCTCCAGGGAGAAAGAGGGGGTAGGAAAG
AACACAGGGCTATATTCTTCTCTCATCTCAGCGGGGTGAAGACCACACCCTGACCCTACT
ACACTGTTTAAGTTGCACGTGGCTCTCTAATAAAGAATATAATCAAGAAACGACCGAGGG
CAAAACTGATGATAAGCTACAAGCAAGAAAGAAGCAATCTAAACCAGTTGGCACCAATTT
GTTGATGACAATCTACAATCTAAAAAATAACCACAAGGATGCAGGTCAGGTGACAATCAC
AAGGTTGTTTTCATTCCCATGGTTGTTCACGGTCGGGCGCAGCGGGTCATTCTTCCAAAC
ACCATCAACAATGAATTTAATCTGAAGTACAAACAAACACTATCAGCTCATGTGGAAGCA
GTGACGATAAAGGCAGAGTTGCGAGATCGTTACCTCATATCTACCGGGGTAAAGCCTCAG
GTTTAACGAAAAAATGCCTCTTTCTGATTTTTCCATCCTTCTCTACAGAAATGAAGCAGT
TCGGTGTTTCGTTATGCTCTAGATTAATATGGCAGCGATGAAGATGTATGGATGATGACG
AAAACGTGTCATAGGCATAACATGTAACAGAATGTGATTAGGCATGCAAGCACAGAACTT
CCTGCAGTGCACGGCCCAAAGAAGACAATATTCATTCCATGGACATTCATACAATTAGAT
GTTTAATTTACTAAATAACTTTGAAAGTTATATTAAAGGGAGAGCGAACAAAGGTGAAAT
GGCATAGTAAATTCATGTTTCCTACTTTAAAACCAAATATGATTTGCATTAACATTCTTC
TGCTGACTGATTTGATTTGTGTTATGTGCTCGATGGAAATGCAAATATCAAGAAGAAAAT
GAAAATAGAACAACATCCCATACATATGCATCATCTTAGATCAATTCTTTCGGGACCTAT
TGACAGTCTTTTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCACTAG
ACTGAGGATGATAGAGAGATGCAATTCTATGGTTAACATC