| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_37286
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_52102 |
1 |
1711 bp |
AK248260.1 |
Not available |
Available |
None |
CDS Structure of MLOC_52102
Contig Sequence (5773 bp)
>contig_37286 5773 assembly3_WGSMorex_rbca.fasta
GGGGTTGTTGGCTTGTGCCCAGGTGGTTGCCCCTTTGCGGTGTATTTTTGGCCCAATAAT
TCTTATATATTTCAGAAAAAATCTCCATGAAGTTTCAGGTCATTCAGAGCAACTTGATTT
TTCTACCTTTTTCTCGGTTTCTCGGTCCACAATTCCAGCTTTCAGATACTTCCCTCTTCA
TAATGTACCTTGCATATTCAGAGAGAAAATACATAAGAATTACATAATAATAGGGAATAA
TGAACAATAATAAGACAAGTATCAATAAAGATTCATGATGCAAAATGGACGTATGAGTTA
TTGTTATGATTCATGACTACAAGTTTGTAGCTTTTTGATTCGACAACATATGTCGACTTC
AGCCGAGGGCTTCTTCCTCGTCAACCTTGCTTTTGGTGTCTCATTTTGGCTCATGGGGAA
GCACTCCACAAGTCATTGGATATATCTAGTGTCCTCTAGTCATACGAGAGCATGAGCACA
AGTATTTCTCACATAAGGAGTGGTCAACAACACCATCCTTTCTATCAAATATTGATTTTT
GTTTCATGGTTTTTTTGACAAAATCATATTCTTCTTGACCATACATTTTAGTCACGTGTT
GTTTGTTGAATCGTCGAATGTTTCACACCCATGCTGGTTGGGGTTATGCCATCATTTATG
ACTGTATTTTTTAGTTGTTTCAAACTTCCATATATTGAAACATCCTATCATAAATTTTGT
TCTAACACTAATGGTAACTTGTAGCACAGTCCATATGTGTTATCGAATGTCTCCCTTCCA
AACCACGACTCACTTTCTGGTCAAGAACACCATCATCTCCACCTAGTCTTTTTTATTTTT
CTTCCATTTTTCCCGTGCAAACCAGCTTCATCCATTTTGCCCATTTTACCAAGTGTCGTT
TGGAGAATCATCAAATGTTGTACGTTCATGGAGGTTATGGTAATGTCATCATTTATTATT
ATAAATGTGTACCCTTTTCGATTCGACTTCCAACACCAACCTTGATATCGTCATCTCTCG
CTGAGGGCTTCTTCCTCGTCACCCTTGATCCTAGTGTCTCATTTTGGTCCATGTGACAGC
ATGACGCGAGACATTGAATACATCAGAGCGTCTGGTTCTGATAACCATACGTGAGCATGA
GCACAACTATTTCTCGCATAAGCTGAGGTCGGCAACACCATCCTCTCTACCATTCTTCAT
TTTTGTTCTATAGTTGCTTTCCGTATAAACCATCCTCTTCTTGTCCGCCCCTTTGGTCAC
AAGTCATTGTTGAATCATCGAATGTTCCATGTATATGGAGGTTAGTGCTACATCATAATT
CATGACTACAAGTTTGTACTTTTTTATTCGACAACAGATCGACCTTACTATCCTCATCAT
GTCAGCCGAGGGCTTCTTTCTCATCATCCTTGCTCCTAGTGTCTCATTTTGGCTCGTATG
ACAACACGCCATGAGACTCTAGATATATCAGAGCGTATGAGTCTGGTAATCATACGTGAG
CATGTCTCCACACAAGTATTTCTCACACGCTTTGCCACGCCTACGGGGATTATCTTACAG
AATAAGTGTACGTATTGACGCAGAGACCAGAGGTTAGGCAGCTGAAATCACGTGGTATTA
CATTGAAATTGGGGTGGGGTGTTGGGAGGGGGTGTAGATTGAAACTAAGGAAGGATGTTA
GTGCATAGGCTATTTTGATAGCTTGTCAACCACGCATTTAGCATTTTACATTTCTTGGCA
ACATACGGTTTCCTTGTAAACTTAGTACTTACATATAAATCAACGAGTAATACTAGAGTT
ATGAATCTTTCTACTCCTTCCATTTACTTATACAAGGCCATTATGGAATGTACATTTTGC
ATCTATACAAGGCCAACAACAGTAATCGAGGTAAACATTAACTATGTTTCCTCGAACTAA
CAACTTGTTTAATACTTGTGTGCATACACTCGTAATTACACTCAGCTACTTCCTTCACTG
AGTGTTCTTGCATGCATGCAGTATATTAATGACCCCAGTAAACGAAAAGAAAAGCTAGAT
TGTAAAACATGTATTAAATTTGACCTTGATACATGTAATTTTAGTTTGTGGTCTTGTATA
TAAAAATAAAGAGAGTACATATTTTATGGATGCTGATTCGGTAATAGTTATTGCTTGAAG
ATTAAATGGGGAGGAGGGGCCCATCCTGTGAAACTCATAGGAGGGGAGAAAAAAAAAGAA
AGCTTTAGTAAACCATATGTAAATCGCGAGTGAATATAGTATTAAGCTGAATTGACTCCC
ACAAATTCCTAGTTTATGTTGCGTGGATCCAATAAGGCATATCAAAGAGATGAACAATTG
CAAGAATTGGTTATTTACTGCTAAATAAACTTGCATAAATATAGATTCAAGGATGAATAC
ATATTACAAAAAAAGCAGGAGCAGAGGTCAACAACACCATCGTCTATACCCAATATTTTG
ATGTTTGTTTCCTAGTAGTTTTTTGTTCAAACCATATTATTCCAGCCCATCCATTTTAGT
CACGTGTCATCTGTTGAATCGTCGAGTGTTGCACACCAATGAAGGTTGTTACGTCGTCAT
ACAAATTTGCAGCCTTTGTATTCGATTACAAATGCCAACCCCAATATCCTCGCAAGAATT
GGTTGAGGGCTTCTCCTCGTTACCCTTGATCCTAGTGTCTCCGCTGGTGCAACACCATGC
CACGAGTCGTTTGATAAAGTGTACGGATCCAATAAGTCAGGCAAACATACACGGACATGC
GCTCAAGTATGTCTCATAAAAGTAGATATCGGTAACATTTGGTTTTCTGTAAACCATATT
TTTAAAAAGGATCATGCAAACCATTTTCTTCTAACCTATACATTCTAGTCATGTGTCGTT
TGTAAAATCATGGAATGTTCCATGATACCAACCTTAATGGTAAACTACTACTATGGTCCA
TCCAATTTCTACTTTTGCTTACAACCCATAAACAACTTTATAAATATGAAGTCAAGGATG
AATACACATACACAATACAAAAATGATAGAAAGAAATAATTATGAGTTTATGACACACAG
AATCCTACATGAGCATGAGCATAAGTATTCCTCGCAGAAGCAAAGGTCGGGCAGCATCCA
ATTTTCCTTGTAAGCCTTCCTAGTTTTATATAGCAAAATGGATCCTAAAAAGCCGAACAA
TTGCAAGAATCGGTCCTTCCTTTGCCATAAACAGTGAGCTACCATGATCCATCCAATCCC
CCCTCTTTCCTACAACCACTAAAACAGGCTTTACAAATATCATTCCAGCCTAAAGAAAAA
CCACAGCCTCAGAAAAGAAATCATTTCAAGGATGAAGGCATTTTACAGAAAAAGAAAGTA
ACAGGAAGCATGACAGACACGCAGAGAATCCCATCATCCGATCCTAGCTCACGAAGGATC
ACCATCGCCAATAATGGAAGCAAAGAATGTGGGAAAGGGAAAAGGAGGGGTCAGGGATGC
CGCCGAGGAGAAACGCCCGGCTGCCTTTTCCATGCAAAAAGCTTGACATTCTCACTCAAT
CCCGGCAGTCCCTCTCGTCTCCATCCATCTCATCCGTCCACCTCTGCCACCCCACACTCC
ACAACGAACGAACGAGGCCAAGCCCTCCCTCCCTCACCTCACCTCACCTCACCTGGCTTG
TCCCTGCTGAGCCGCGTGCGAGCATTGCTCCTCCTCCACCACCACCACCTCCAAATACTA
CTCCCTCCCTTCCTTCCTAATCTCGCTAGACGGTTCCTCCGTATTCCCACACATGCCATC
GTCGACACCTGTCGGCCTCCTCCCCGCCGGGTTTCCTTAGCCGGTGCGGCCCCCTCTTCT
GCTGCCGTGGCCTCCGGGGACTTCCCGTGTCCCGAAAGAGCCCTCCTTTGAACGCGGTGG
AGCTGTTGGGGGCAGCAGGGGAGAGGAGGAGGAGAGCCGTGCGCGCTCGGGACAGGGGCA
GGAGTCCCGGGGCCGTACGGGGAGGGAGCAGCCAGCGTGCGTACGTCCATCCATCCGCGG
GCCACCGCCGCGGGTACAGGGTGTCAGCCCGGGCGTCCACCGGCCGGCCGGGCCCTTTTC
TTTCTGGTGCGGGCCTTCAATGCGTCGTCCTGGCCGCTGATATCCATCCATCATCATCCA
ACCCTCCCCCCGGCCTCCTCGGCCGATCAGATTCGGTTCCGTTAGCTCGAGCTCGCGCCG
GAAAGAGGGGAAGAGATATATACAGATAGATAGATAGATAAATAGAGAGAAGAGGGTTGG
ACGAGGCAGGCATTCTGATCCGGATTCCGCTCCCGCAACCTCCCGCCCGCACCGAGGAAG
GTCAGTTGGTTTCCTGCTCCTCCCATCTCATCTCGTCCCAGATTGTTTCTCCTTCTTCCC
CTCCTCGCCGGATGCTTGCTTGTTTGGAAAAAAGTGGGCGGCTGTCCGTCTCGATCTTAG
TGCGTCCTTGGACGTGAGCTTGGCTTTCGGCGCTTCTCGATCGAGTTCGGCTGGCAAGCC
AAGTTCGCTGTTTGTTTGCGGATCCTTTTTCGCTGGTTAGTAGTTCTAGTTTTCGGCGCT
CAAGTCTCCAGCTCTCTGTCTGGATGTCAGTTTCTTGATGCCGTTGGCGTGCAAATCTGC
GCGAGGCCCGCGTTTGCTTCCGGATCATTTCCTTTTGGATTTGTCCTTCTATTTCCTTGT
TCTTTGTCGATTGTCAGAAAAGTTCAGGTAATGTTGCCGAGTCTGAATTTCATCGTCGGA
TGATGTTCTCCCGTCGTGGTTTGGGAAGTCATAATACCGGCGGGGTGTTGGGATTTACTC
TTTTTTGGTAAAAAATTATTTAGATCTTACGCGTTTTTATTTTTCTTCGCGAGGATTGTC
GCCCCATAATTTGACGTCTCGTTGAAAAAAATCAAATAGTCTGGATGATGCTTGCTCGGG
TCATAATTTTTACTCCTGCAGTTCCTGTAATGGTTCACAGTATGTCCAATTGTCAAAAAA
AATCGCGTTATTTGAACTGCTCCATGCCTGTATATTCCACTAATTGGATGAGAAAAAGTC
AGATCATTATTATAATTCAAGTATTCAACCGATAATGATAAATATTGTTTTGTTTTTATT
CGCTGAACGGAGACATTTCATATAAGCAATAATTGTCATTATAATACTACCCGTTGGGCA
CCAAGTTCAGCTTACAATCTTTTCTTTTCCTATTGTTGTATTTCAGGATTCTTGGGAAGG
CCAGGCTGCTGCCGGTTCTTCAGCAAGTTTCAGGGATCTGTTTGATACTGAGCAGACCCT
TGACCTCTTTGTGCATCACACCCATCTTCTGTACAACTTGCGGCAAGAATTTGGCAGCAA
ATGGGTCGAGGAATCGCTGCGATTCCTGGCCTAAGGTCTCTCGGAGGCGTTTCCTGTGAC
TTTTGTTCCAAATTTCACTTCAACATGTGGTTCATGCTAGTCCAAGCTTCCAAAGTTGGA
ATCTGATCACCTGTGACAGCGTTTCTTCGTCTCCTTAGTTCCAGCAGTATGGACAAGGAG
ACCTCCTGGGTTAGGAGGACTAAGTTTTCGCACACCGTCTACACAAGGGTTGGTTCCCAT
GGGGTGCATGTGGATCCTCTTGGCAGGGATGTGGAGCAGAGGCTTCAAAGGTTTGTGAGT
GTGGCTCCTCTTGGCAGGGATGTGGAGCAGAGACTTCAGAGGTTTGTGAGTGTGGCTCCT
CTTGGCAGGGATGTGGAGCAGAGACTTCAGAGGTTTGTGAGTGTGGCTCCTCTTGGCAGG
GATGTGGAGCAGA
