Map Locations of contig_37282 (10888 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_37282

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52096 10 3617 bp MLOC_52096.4 Available Available LOC_Os07g06970.1, FRAME:-2, EVALUE:0.0, 13107.m00674 protein HEN1, putative, expressed
MLOC_52095 1 332 bp None Available Available None





CDS Structure of MLOC_52096






CDS Structure of MLOC_52095






Contig Sequence (10888 bp)

>contig_37282 10888 assembly3_WGSMorex_rbca.fasta
AGGATAGGGTCGCATCTTGGACGTGAAAGTTTCCCAACAACTTCTTTTGATGATTGTCTT
CACAATCTTGATAAAGTTTTGTAGAGTTGTGAAGACGCTAATATTGTTCTGACTTGAGAC
AAATGCCACTTTATGGCTAATGGAAGTATTGTTTTAGGGCACAAAATATCTGGTGAAGGA
ATAGAAGTTGATGAAGCAAAGATAGATGATATGGAGAAACTCCTTTATCCTTGTGACGTA
AAGAAGATAAGGAGTTTTCTTGGCCATGTTGGTACCTATAGGCGCTTTGTTAAGAATTTC
TTTAGTATTTCGAAACCCTTGACTAACCTTTTGCAAAAAAAACTGCTACCATGGAAAATT
AGCCGGAGCAATAAACACCTACCGGGTAGGAGGGGTTGGCGCAAAGCGTACACAATGTTC
ATTCTCGTGCATACTTCTTAGGGCTTCTCTTGGGTCCTCCTCCCTTGCTCGAGTTATCAA
GAATGGTGTTCATGACGCGAACCCCTTGCTTGGCGAGCGGGGGGCACGCACAAGGGGTGG
GCGGTGCTCTGCAACCATTAGAGTTTCTTCATCCACCGTCACCATAGCATCGGCATTTGG
ATCATGCAACTTGCTTCATGTGCTCAGATGGAACGAAAAGGATGCCCCTTTCACGCACCT
TTCCCGAACACCATGTGGTCACTTATCCAATGTCCTTGGACCTTGTGGAAAGCACGCCAC
TTAAAGTATGGACCTTGGGACCATTCATTTTCTTCTGGCTTATTGTATAGTGGGACTTCT
GCCTTCGCATTATTGAGGCCGCTCCTCAGGAAGAGGCCTATTGTGCTTGGGCGCGCATGA
TGAATTCACTTCAGGGACACTCGAGATCCCTCGTGCTTGGAGTGCGTGGCGGGTTGTGGT
TGAGGGCTTTGGTTTAACTCCCCATGGGATGACCTTGAGCTCGAAGCTTTAGCGATTTGG
CTTCATACTCTAATGAATCTGTTCAAGAACTCACGGATGGATTCTGCCCCCCCCCCCTCC
TCCACCGGAGGGTGAACTTAATTCCCTTGGAAATTTGCAAGGGGAATTTCTTGTAAACAT
TCTCATAATCAGGCCACGCACCTCCTTCAGTTGAAGAACCATGTTTGCGCTAGGTAAACG
TTTCTGGCCGGTGCGCCGGCCGAACCGTTTGGCCGGCCGCACGCGACCCGCACTGATTAG
GCATGCAACCTTTTTTGTCTAAATTTGTTGCAACCAGCTTTCATATTTGTTATAAGTATT
TTTTTTATTTGCTACATTTGTCCAGTAAAAAAGCTGCATGTACGTTTGGTTGCAATTCCA
GTTCGTCGGATTTTTCGTTACAATCGGTGTTTTTTACTTTTGCTACAACCGTGTTAATTT
TTACTACAACCAGCATCATTTTTTGCTGCAACCGTTCAGTAAGTTGCATCCACGCTCACG
TAGATATTTGCTACAACCGGCGTTTAACTTTTGCTACCACGCACCATCAGCTTCTTTTTT
TGCTACGATCACGTAGATATTTTTTTTTCTATAATTTTTTTTGTTACAACCGTTGACGAA
AATTGCTGCATCGCGTCGAAATTTTGCTGCATCAGAAAAAAAATATTGCATGAAGATCTA
ACGCGCCGAAATTTTGCTGCATCAGGAAAAAAATATTGCATGAAGATCTAACGGTGCGTC
CGCACGGCCAGAGCACTGGCCTTTGCGCTATGCCAGAGGTGCACTGGTAAGAGCGACAAG
CCACGATGTTGCAACCACGGGTGGTGCTGCTGGGTGACAAATCATGGGAACGTAACAATT
AATGGAGGAGCACCGTCAAAAATAAGCAAGTGCAAAGCTCTGCTGAGCGGCAAGCCACAG
TTTTGCGACACATCACAGGCAACATAACAACTGACGGAGGATTATTATTCTCACGGCATG
GTGTGTGGAAGAGACGAGCGAGTCCTACGATCCTTAGCATAATGCAGCTGCCCTGGACGG
CTGGGGGGCGATCGAAGCCTCCGATGCCAGGCATCCTCCTTTTGTTTAAGGAGGCGCCAT
GGCTACTCTTCTTCATCATGCAAAAGCACTCTGTGAAGAAATAGTCAAATAGTCATATTG
CCTACTACAGAATATTCAGCTCTCTACAGGCATTGGAGCCATCGCAAGGGATAGGTTTCG
AGCAGCTACTGCAACTATTTAGTTCAACGCGGTAGATATCCAGCAACACACTCTGGGTGG
ACTATCAAACTGACAAGTTAGTAAGAACCAGTCTCATCATCTCGGGTACGAGGACGGTGA
GTCAGGTAATATTACCTCCGCCCAAACTCAGTCAGAGGTATAGATGCGTTAGGCCATTCC
CAGAGAACTTCATAAGGTTGATGCGAATCATTCTCGATCGGGGAAGATCCGCCTTGATCT
GTCGCCATTCTTCTGAAAACAGCAATCTGGGAAGCATAACCAGGTTCGTCGCTCGAGCCG
CCAACACCACTGAACTCCACACTGTAGTTGTGGCTTGCAGCGAGGCCAGTAGCCCACCGC
TGGAACTGGGACCGTGTCCACTCAAACTTGTGATCATGGTTGCGGAACTTGCAAGGTCCA
GCATTTTCTTCCTGCTGCTCTTCCTTGTTTGGCATAGCTGACCTCTGGAGGATAGGGTTG
TATTCGTAGTTGGGTGTGGAGACAATGAGCACGGCCGGACAGAATGAACTCAATACAACG
TTGCCAAATAAACTTGCTTGGTCCTCCTCCACATGCTCAATCACCTGCAGTTTACTTCGG
TTAGTCGAAAAAAGTCCCTAAACAAAACCAACATACAAGAAATGTAGGAGTACAAGCATT
TCCAAGTACATTTTATGTAGTATAGGTTAATCACTACAAACGTCCATCAGGTACGATGTC
TTACACATCAGGAACTAACTCCCGCGGGTCACTGCTACAGTAATTCTACGTCAAATCCGC
ATCAGGACCTAACAACCCATGACATATCAATTCTAGAACAAAACCAAACATAACATTTTA
TATAACAACACCAAACAAGAAGATGCAAACAGTTCAAAAGGAGTACTCAGCTACCTCAAG
ACAGGTGCCAATGTCAAACCCATATAAGCGAGAATCAAAATCTGTTACTGATCCATGATA
GAGCACAGCTGCTGGAAAACTAGTTTGTAACAAGAGTTTCTTGCTAAGCTTCTGATGAAG
GCTCTGCAATGTCAGATAGAGGTGAAACAAGTCCAAATGTAAATCACTGAAAAGGAAAAA
AATGGTTCAAAGAGTAAACAATTATTAAAGCATGAATATTACCTTCGCCGCTCTCGTAAG
ACCCTTTCGAGAAATATCAACACCAACAATTTTTTCAAGGGTTGTTGGATGCTCTAACAG
TGAGTCAAGAAGACTACCAGATCCACAACCAAAATCAACCTGAAAAATTCAGCTTTAATA
GTGACAAGCCAATACTTGAAAATAGGGAACTAGGATGAAAGTAAAATTCACCAATGTTGT
AGCATGCAGCTGGTTGATGTGCCGAACAGCAAATTCAACCCTCTGTTTAGATAAAGGAGG
ATTGAACAAGGCCTTCTCCATTCTATCTTCTAAAGGTTCAGTTACTTGCAACAACTTTAC
AGAGAACTCCAAGACGCAGCTGTCTGCAAAAATGTTCAAAATGTGGGAAGGATGTTGAAG
CCCAATTCCAACAATGATAGATAACTGTCAGATTGAGCTATTGATATAGGTAGCTCACCT
CTAGATATCTTGGAAAGGTCCGGTGACAACTCACTAGCTGCAGCCAGGCTCAAATCCCTA
TCAGACAGTTCATCTACAAAGAATGCACTTTGATTAACTGAGATTTGAGTTGCACATGAT
TCAAGCTGATTCCTAACAGCTCCAGCCCCTATCTCAAACTCAAACTCATTATTGACTTCT
AGGAGATGTCTCTTTCTGCTGTCCTTCATAAACAGGTGAATACTGTAGCTTATGCAAGCC
ATCGATCCATGGGATGGAAAAACACCAGAATCTTGACCATCAATGTCTGTTAAAAATGTA
CTGCTTTCAAGCTGCTCGTATGATGTATCCATAGAAAAATATCCAACTGTGTTGCATGTT
CTTGAATCACCACCACTTGTCTTGCCATAGACAGATAAGCACATTGCAAATTCTTGTAAA
AAAATATTCGGATATATGGTGAAGCCATCAGTGCTCTTAGGAAGGTATAACTTCTCCACA
GGCATGTTCAGCTGCTTAAAATAACGATTGAACCAAATCAAGACCCTCAACGCAGAATTC
TGAACAGCATCAGTTTCCTTGCTCCAGCTATAATCTGTATAATACTCTAGTAAAAGCTCC
CTCTTCTTTGAATATATTTTGACAGAGCACTTGAACATGTCTGGGTTTTCCTTGCCAATC
CTTCCATCAATTATGCACTGATCTTTTGGTGACCCCACCTGTTCAGAGCCCACAGCTGAT
CTTAGAACATTACAGGATGTACTTACCCTATTGGCAGCGAAATGCGGTTCTGATAGCCTC
TGGAGGCGACAGAACGAACAAAGGAGATCTCGTGGAGAGGGGCCTCTCCAACTTGTACGA
GTATAAACACATGGAAGCTCTGCCACAAGAATCGAATCCTTGGAGATCTTGTAAATTCCA
TCAGGTAATTTTCTCAGAAGAATCCTGAGGATCCAAAAGCATGTTACATAAACAAAATAT
AAAATAAGGCGAGAAAGAGCAGTTCCTAAAAGATAAGAGAAAAGTAGTCTCGAAAAATGA
AGATAAGTATAGAACACAATGGAGAGAAACTGATGAATGACCGGTATCTACAGCCAGATG
ATGACCCCCTATAGATTGTTAGCTGGTGTATCACTTATTCATATCAGATTGCAGTTTTGC
TGCAGACATATATACTCCCTCTGTCCAAAAATAAGTGACTCAAAAATGACTCAATTTTGT
ACTAGTTTAGTACAAAATTGAGTCATTTTTGAGTCACTTATTTTGGAACGGAGGGAGTAG
CATAAAAATGGAATCGTCAACAAGCTTGTACCTGTAATAGGTACATAGATTGACATGATC
AGTTTGAAGTTCTGTATCTCTCCTTGTGTATCCAACATTTGCCAAAACAGCATCTCCATA
AATTGTTTGGCCAGAAATGTAGGAAGCTCGCTTATTTATTACACAGTTCATATTGCGATC
TCCACAATCATCCACCAATTCTTTTGATAAATCAGAAACAAATTGTACATCCGGAGCTGG
GAAATAAAACCTTATCTCAGAAGATGCTTTGCCAACTGTTCTGTAGTAAGAAAAATGCTT
TAAAACTGTCAGCACAACCAAATTGCTGTCAAGGTTCAGAAGTCAAGACTTCACCATGTA
CTGACCTTGAGACAAGGACATGAGATGAGTCAGTTGCAGAGAGCTTCGATGCTATATCAC
CCATGTAATGTTCATTCTCTGACATATTAAGGCTTACCACCTTAGGTTCATCCTCCATCG
CACAAGGAATAAGAACTGCTTCTACTCTTATGGGATCTGAAATACCAGACCAGCGCTGAA
GTGCCAAATCAACAGCCTCAGGGGAATAAGGCCTTTGACTCTGAATCCATAAGTTTCTGT
TACTAACAGATACACCAGGAGATTGTTTGGCAGCATTATAGATCATCGAAAGAACCAAGA
GAGGATCAAATTCTGCCTTAGGGTCAATAATTTTACACAATGTATGGACCTTCACATCAC
AAGCAACAATAGCTGAAATAAGTATCTTTCCAAGGAGGTCCCCAGTTCTTCTGAGCGTCA
CACTCAAGTGTCCAACAAGAGGATGAGATGATGTGGGGAAGTTCTGAAATGAAGCATAGA
AGTATGGCCTTGTTAGAATAGGTATTGAATAATCAAAACTCAGAAGGATGTCATGGACAA
ATAAACATGTGCTTCAATTAAATCTAAAATTCATAGGGAAAATGACTAAGACTTCAAGGC
CTATATTTAGATAATCATATAGAAACATGTGCTCAAACATGAAAGTGCCCAAAGAAAAAA
CTGACACTATGTTCGATCAGTCTGTCTTTTACGACAGATAACCATAACTTAGATATATCC
CTTCAATAAAGGTCCTCATTATTAAACTTACAAAAATATTAACAATAGTTATTAATTACG
CGCTACAAAAACAACCTAGCCATTAAATGCAAGGATCCCAGTGCTAGGAGAGAACATAGA
GTTCCCCTGAAATGGGCAACAACATGAAAATACCAATCTGCCTTTTTCTTCCTATGAATT
TACATTTGTAAATAAATTAAATCTTAAACTTTGACGATACAATACCAAGATCAGACAAAA
ATACGGACCTCATCTGTAAAGAAGTAAGATATCCGACCAATAAGTTCCTCCCAGGCTTCT
TCAGGTGTATTAGGAATATTTGATGTGGGCTGAATACCAAGCTACAATAGGGGGAAAATG
GAGAGCATAACTTGTCCATAAGCATGAAGAACATTGCACATCATGAAACTATGTTGTACT
CCCTCCGTTCCAAAATATAAGTCTTTTTAGAGATTCCATTAGAGACTATATACAGAGCAA
AATGAGNNAATCTACACTCTAAAGTATATACATCCGTATGTAGTCTGTAGTAGAAACTCT
AAAAAGATTTATATTTAGGAACAGAGGGAGTACATACCAGATAGCAAGCTACCTAACCTA
TCTTCACAAAGGAACTAGGTAATTGCGCATCTTCTCACTGAAGTTCCTAACCATTGTTTA
TGAGAATTATCAGTGGAAAGGGTGACGAAAGATGGGCTATACAGCTCATTCACCAAGGAT
GGATTCTCTAAACTGGGTTATTGACCTCACAAGCCAAATGTTTGTATCTAAGATACAAGA
TAACATTGCTGCCTAAACATAATGGGGCACTTCATGCCAGAAAGAAACAACCGAATCTAG
AGAATTGCAACTAGTCCTTGTCCCCCTTTTCAAGTAAGACAGCAGGAGGGAGAGAATTTT
ATATATTTATACAGTATAGAATCACAGCCTAATAATGTTACAAATACATCCTAAAGCGGC
AGCGGTAGAAAACTTTGGCAACCCACGTGTATAGGGAGGAAGCAGAATCGCACGCCCCCA
CCAGCCCTAATCGGTTTACCTTTTCGATGGCGATCTGCGCGGCGGCCTGCTCGGCGTCCT
TCTTCCTGACGAAGGTCCCCGGCGTGGCGACGCTGAGCACTTCGGGGATGTCAAGCTGGC
ATCGGTAGACGCACCTGGTGTTCTGCGGCAGCGCGAGGCCGGGGCAGACGCCGTCAGCGT
CCTCCCGCACCTCGTCCACCTTGTAGACGGCCTTGGCGCCGTACCGCTGGTGGATCACCG
CCTTGGGCGTCGCCGTCGCCGTCGCCGTCGCCGTCGGCATTGCGACTCGTCTCGGCTTCG
ATCGACCCCCAACGCCTGACCACCGTGGCTAAATCCTCCAATCGGCCCTGCAGAATCGAT
GGATCGATCAGGGCGGAACAGAGTGAATTTGCGACCGAGGGGTGGGAATGGAATCGGAGG
GCAAAGGACGGGTCACGAATTAGTGGAGTTAAACCCCAACCGTGAAGAGGAGTCGAGGCC
TCGCCTTCGAGGGGGTTGGGTGAGGACTGAGGAGGCGCTTCCGTACCGTGCGGTGGGGTT
TAGAGCATCCCGTCTTACAGCATTTCCTCGCGCACGCGCACACACACCCAACAACAAGCC
CTCCCCGCGACATTTTTAGGGTCCACGGTGCGAAATCGGTTCTCGGTTCAGTCATACCCT
AAAAGTTCGTTTTTCGTTGGCTCGGACGGCCCCCACGATCCCAGGCCCGGAGGCGCAGGT
GAAAAACGTTTTGGCATGAAAAACCGCTCGGCCCGCCGAGTCAGCGTGTGGTCGTGTAGT
CGTCGTCCTCACCGCCTCGTTTCTCGTGGGAATGAATGCGAAGGATGCACCGCCGGACGG
TGCAGTGAAGGCGCGAAGACGCACGTCTCGGCGACTCCTCGCAGGCGTTCACACGCCGAC
GCTCCGTGTGCTCGCCCGCCCGCGGCTATATAAGGCGACCCACCCCCGTGGTGGCCACAC
ACTTCTCCTCGTCGACGCTCTCCCCTCTTCTTATTCGCCACCGGCCTTCTTCACCATCTC
AGCTTCTTCTCCCAATGGTCGGACGCTACCACGGCGATGGAGCTGTCGCAAATGCCTTTG
ACCGTCGGCACCTCCACGAGGATGAGGCCCGCCTCCTCTACTAGGCGGAGTACCCGGCGT
CGTCGGACATACGGGTGTCAGGGTCTTGGAGGCTCAGCATAGGTGGCGTCCCGGTGCCGC
CACCGCCCACCGGAGCTGAGCGGCGAGCGAAGATTGCGCGCATTATGTCCGGCCTGCAAG
AGAACTCGCGCAATCTTCCACGGTACACCCCCGACAACAACGCGCTCTGGACGACATTCT
TTGACCGCCGGCACGCCGACCAGCTCGCCGCCACCAACGGTATCGAGGCCCGCGGCCGGC
ACAACTCCGAGGGGCGGCGTCAATGGTGGAGCGGTCCCGGCCGCACGCTCGAGCCCGTCC
TCGAGCACATCAAGGACAGCAATACATTCTGGTATGAGTACCCTCCCCCGCCGACCTTCT
CCCGTCGTCGCGGCAGCTCCTGAACCCCGAGGAGGATGGAGTCGACGACGTCGTCCTCGT
CTGGCTCCCGCTCCTTCGGATCGCCGGCGCTGCTCCCCGTGAAACCGGAGCCGCAAGAGA
CGCTGCTGGGGCGGTGCACGCGCAGCGCTGGGATCGTCATCAACGAGTCCTGCTTCTTCC
TTCCGCCTCGTGCAGCCGAAGACGGGACCGGGGCTCGTGCCCGTCAAGCAGGAGCACCTC
GCCATGGCTGCGGACGACGACGAGGCCGCCCTGAAATGGGTGAGGGACGACTATGTCCGG
TGAGAAATGGAGCGGCAGTGTCGTGCCCTGGAGGAGATCTTCGCCCGTCGTCGCGGCCGC
GAGGAGGGCGGCATCGTCATCCTTGACGAGAGTGACGAGGAGGCGTCGGCGCCCGTTCGC
CTTGGCGACCCAGGGCAGGGGAGCAGCAAAGACGACGCTCCAGTGGGCGGCAATGGCGAC
GATGGCAACGATGGCAACGACGACTACACCGCCTTCTACAAGCTCCTCGACGTGTAGAAG
GCGGCGGCGACGGGCGGCGGTGACCTTAGCTAGTTTTTAATGTTTAATTATGTTTTTTTC
TAGTTTTTGTACATATTTTAATCAATCTATGAACTTTGTATGAATTTCATATGAATTTTG
GCCAAATTTGGGGCGATTCACATTTTTTAAACCCTTTCGGGCGCCCATTGGGGGGGGGCA
ACTTCGAACCCAAGCACCCCCCAGGGCGAGTTTTTCGCTGGTGCACTCCCAGACAGCGCT
ATTTCATGCCCCGGGGGGCGAACGGGTGGAGATGCTCTTAGGCATAGTTCTTTTCAACAC
ACCGTAAAATCTTGGTTTCGAATATTTTGAGTAGAAGGACTTGATTTGTCTTTCAAAATC
CGAAAAGTTTTCTAGAATCCTAGTGCAATCCAAAAGCTCCAAAAACCTGATTTTTCGAAG
ATTGGGGAGAGTTTTTTAGAAAAACGTTTTGAAATAGAGGTAGAGCCCTATCCTATCACT
TAATTACGTCCAGGAAAACGACTCACCGCTCCACTCGTTCCACCCTGTTCGCATGAGGGA
ATCCTCCGAGACACCATATAGGATTGTTGCGCCGCCGGCCAAGCTCCATCCCGCCGCCGC
CAGGCCCTCCCGCGGCCAGGTCCTCTCTCTACCGGCAGGCCCTCACGCCGTGAGGCCCTT
TCCCTGCGAGCGCCAGGTCCTCTCGTCGCCGCCAGGCCCTCCCGCCGTCAGCCAGGCCCT
CCCATCACCGGCCAGGCTCCCTCCCACAGTCGTCATTTGCTCCATCAAACCACATGCCAG
GCCCACGATGAGGCACCCCTTTCCCATCTCTTTATTCTACATTTTGTAATGCAAAATAGC
CAGATTGATTTATGTTGCTGATGCTGGTTGTTATTGGTTTTATTGGTGCTATTTTCTACT
GTATAAACATGTTGTTACATTGATTATTCTCTTGTTAAATGCTAATGTTGAATTATAATG
GTAGTGGAAAAAGTCAAAGAACCCAAAGCAAATTGGGATAGTTCTGCTCAGACAATGGTT
ATGAGTGCATGCATAGAGGAGGTTTGAGCAAATAATCGCAACGACGATTTTTTGTCGGAT
ATAGGACAAGATAATTTGCATAAATTTTTTAATGATTTCTCTGGAAAAAACTACTCAACA
CTACAAATCAAAAACAGGTGGAGTGTTTGTAAAAGCGAGTACAACACATGGAAGACATTG
ATCCATGAAGCATCTGGCCTATGAAGAGATGAGCATACAAAGACTATTGCTACTACAAAT
GAGTGGTGGGCATTGGAGATAAAGGTATTGTTGTTGTCATGTCATTTCTTAAATAATGAG
TCATGTCGCTTCAGTTTGATATTAACATGTGGTGCCTTATGATTACAGGCAGATCCAGAA
GTTGTCAAGTTCCGGTATGCTCCACTAGCAGATGAGGAAAAAAATGTTAGAGGTTTTCGA
TAATTGTTGTGTCACAAATGAGCATGTGAGGGTGCATACTCTGTCATATCAAGGTGATCC
TGGGTTCTACCGCAGGTGCATCGCATACGAATTAAAATTTTCCTACGTGCAGAACATCCA
AGAACATGCTATGGAGATGGATCACGGATACTTACCGCTAGAGCGCAGTGTCAGGCAACG
GAAGTAGAGTTGGGGCAGCACGTCCGCGTGGTCCATCTCCTCCTCGTTCGATCTCCCTCG
AACAGCCGGTCATCGGATCCCACGTACAGGCTCGCCGAAGCGGCACAGGGGCACCGCCTC
TAACGGTATCCGCACGCGCAGGAGGAAC