| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_37245
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_52040 |
3 |
2553 bp |
MLOC_52040.2 |
Available |
Available |
LOC_Os11g07020.1, FRAME:+1, EVALUE:0.0, 13111.m00718 protein fructose-bisphospate aldolase isozyme, putative, expressed |
| MLOC_52099 |
13 |
4720 bp |
MLOC_52099.2 |
Available |
Available |
LOC_Os11g43420.1, FRAME:-1, EVALUE:3e-128, 13111.m04324 protein LZ-NBS-LRR class RGA, putative, expressed |
| MLOC_52037 |
1 |
1865 bp |
MLOC_52037.1 |
Available |
Available |
LOC_Os10g18220.1, FRAME:+3, EVALUE:0.0, 13110.m01497 protein GHMP kinases ATP-binding protein, putative, expressed |
| MLOC_52038 |
2 |
1352 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_52040
CDS Structure of MLOC_52099
CDS Structure of MLOC_52037
CDS Structure of MLOC_52038
Contig Sequence (9494 bp)
>contig_37245 9494 assembly3_WGSMorex_rbca.fasta
TTCCAATCAATACAATTATAGTATGTATAATAAATGATTATCATGAGCAAGGAAATATGA
TAATAGCTAATTTATTATTGCCTCTAGGGCATATTCCAACACCTATGTGATTTGATCTGA
TGATGACGGTGTTCATGCATCGTTTCCTTGTTGAAGGTGTTGCTGTTGAGGGGGGCTTCT
TGTCGTTCGGGTGTTGTCGAAGGCAGTGGTAGGAGTTGATATTTTGCTGAAGTGGGTCGT
TTGCCTCGCCTTTGACCCTTGTGTGTCCTGTTTCTCTTCCTTCTTGGTTGTGTGCATTCT
GTTTCTGCATAGGTCGGGTGTACTCATTGTGTGTGTATGCGCTTGATACGTCATTATGAG
TTAATAAAGAGCACCCTTTATCGAAAAAATAATGGAATCATGGCCGAATTATACCCTACA
CCCACCTTATTCTAGTGGCTATTTTCTGCATCACTGCATTTAATCTTGCACATTACTCAT
AGCTAACTGTTGTACTAGGAATCCACATAAAATCCAAAGTTGCTTCAATAATTACTCTTT
TGCACTTACTCATTCTTACCCGTGTCAAAAAGGCAAACTTGACTTTTTTAGTTGGAACTT
AGTAACACACCATAGCATTCATTGGCAATATATATCAAAGCATATCATTTTTACTTATAA
TAAGGACATAATACCGACATGTCGGAATAGTGATCTGAGATTCTCACGTGAGTAATATGA
CATTTCAAGGTTTAGAGTTCAGATAAGTTGCTTCAGGTTTACTCAGAGTAAGAGGGGCGT
ATGCGCTGAGCAACAATGACATACAGTAGGTGATGCAAAATCATTGTCTGGGCTAAAATG
CATTGTAATATCATATTGTAATCAATGAGGATTCAATCAAATACATTTAATAAATATGGT
CATCAACAAATTAATTTGCACCTTGCCACAAGGAAGAGACTCCAGGGAAGTGGAATACTC
AGTGGGATTTCCATGTCGTCCATCACGAAAGCAGCATGCAAATCGAGGATGGATGAGAGA
GAAAATCATGGAGTGATGGTCGCCAGTCTACAACGGGAGGAATGAAAGCAAGAAGGAAAA
CATGATGGGGACTTGGGAGAGAGGGGATCCATCACCATTCACCCCCCGCCAACGCTTGCC
CTTCAATCACCACCGTCGCTAGCCAAAGGAAAGGAGATAGAGGAACCCCAGGTTAATGCA
CATAGGAGAGGGGCATCACTTCAATGTGCGTACCATTAATGAACAAAGGAGCCTCAATGG
AAAGAGACACGGGGAGGGGGTGTCACCTTGGCACTCGTAGACGGCCCTACTCAAGGGGCA
CCATTGCCCCTTGCTCACGCATGCTGACCATTGGAGAAGGGTACACATGCATGGCCTTGG
GTTGACGGAATCCTGTCGACGAATAGGTGAACGAGGCATGGAGACATAATCTGGTACTCC
TCGATGATTGCCATTGTGAGACATGCCCAACGGACGGAGGAGTGATGTGTGTGTGTGGTG
GGGGGCATCGCACTGGCGGGATAGGGGGTTGTGTGGACGGGTGAGGGTACGGGCATGTGA
ATGGGAGGTAAGTTTCGATTTAGTTAAGGTTTTAATTTGATTTGATTGAGTTAATGCAGG
ACGTGTGAAAAAAGAATGAGAGAAAAACGATGAAGGCGAACGGACAAATACCAACTTCAT
TATAACAGTAATATTAGAAAAGAGAATGTAAGACCGAATCATTATGCTACCATGAAGCCA
TAATAATAAAAAAGAATCATTTACCATAATCAAATACTCACTCTATACCTAAATAATCAT
AGTTGGAGAAAACTAGCTTAGTTCATTTCAACTATAATTATTTAAATAGAGAAGAAGTAT
TTGGCATCTTACTCATCGAGCCTAATTCGGACTTCCAGGTTTTTAACATGGTTGGTCGAA
AACCGAAATGCTTATCGTGCTCTAAAATATAAGTTGCGTTATTTCTTTAATGGTTGTTTG
ACCAAGTTCATAGAAATGTTAACGACTATGTTAATATATCAAAACAAATAAGGGCATGTA
TAATGGTGCTATCTTAGGAGAGCCAGATAGGATAAATGATGAGGTGGAGGAAAGAGAACT
TGAAATATGTCTCATCATGTTTTTAGGAATAGCTAATTATAAAAGATAAGGTTAAGAGAT
GACGAATTGTAAACTTTTTTTGTCATCTCTAAATTTAAAAATAAGAGTATCTTATCAATG
TGAAAAATATGCTTTTATGACTGATGTAATGATATTTAATTTTGGCAGCATCATAAATGT
TGGTGTTTTTTCCATAAATTTTGGACAAACAAACGTGGAAATTTCTGACATTTTTTAGGA
AGATTTTGACCGGGGGGGCTGCCAAAGTGCCAGTCCAGAGTTCCCCGTCGCTGCGTTCAG
GCAGCCGCCGGCAACCAGTGAATGCGTCCGCGTCCCATCGCGCAGAAGGAAGCAGAGACC
AGCGTCCGGCCGCCACCTCCCTACCCGACCTCTCCCCCCCATCGGCGGCAGCCACTCGCT
CGCCGTCGCCGGCGCGGCGCCACCGCTGTCGCAGCCCACTCCCGCCCAGCGTTGCCGCAA
GCAGAGGAGGAGCGCCAACGCGTCTGGCGATACTTCCTATGCGCCACCGTCGCCAGCGAA
TCACACGGCAGCAGTAGCGCGAGGGAGGATCAGAGGCAGTCTCTCAGGCCGAAAGATTCG
GATCGATGGAGATCCGCGCCCGAGCGCCCGGCAAGATCATCCTCGCCGGGGAGCACGCCG
TCGTCCACGGCTCCGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCAGTCCTCCCTCC
ACCTGCCCCTACCAGGTCTCCTCCCCGCCCTCCCCACAAACGCCATCCGACCCCCGATTC
CTCCCTGATCCTCACTGACGCTCTTACCTTCCGCCGTTTCCTTCGTCTTTGGCAGGGGAG
GACGGCGCCGGCGAAGTGGAGGTTGATCTGACGGACTCGGGCCTCGCCTTCTCCTGGCCA
TGCTCGCGCCTCCTCGAGGCGCTGGGGGAAACCTGCCGCAAGGCGGAGCTGCAGGCCCCG
AGGCCCTGCTCCCCGGAGGAGCTGGCCGCCATTGCCAGGCTCGTGGAGCTGCACGAGATA
CCCGAGGCCAAGATCTGGCTTTCCGCCGGCCTCTCCGCGTTCCTTTACCTCTACACCTCC
ATCCTGGGGTCGGTTGGCAGCTTTCTTTTCCCCCAATCAAATCTTGTAGCAATGCTGAAC
CTTCCTGACAGTAAATTTGATGCAACTTCTTGTGTAGGTGTAGGCCTGGGAAGGTCGTGG
TGAGCTCGGGCCTGCCGATGGGCGCCGGGCTTGGTTCATCGGCTGCATTCTCTGTGTCCT
TGTCAGGCGCGCTGTTGATGGCGGCGGGCGTGGTTTGTGCTGAGGGTGCCGTCGCCGGAA
CAGAGTGGCAGTTGTTGGGGAAGGATCATCTTGAGCTGGTTAACACGTGGGCGTTCCAAG
GGGAAAAGATTATTCATGGCAAGCCTTCTGGCATTGACAACGCTGTCAGCACTTTTGGTA
TGTTGTTCCTCTTGATTTGTTAGAATCTTTCGATTCGCGCCAAAATGCGTTACGACTAAG
ATTTTTTTCCTCTAGTGGAGAAATCGGTACTGAGGTTATATGTGTCTGTTTCATTATCCT
GATCCGGAATGCCGTTACTGTTGTTATAATTGTTACTGAATACTCATATTCGCGCCAAAA
TGCAGTGCAACTTAGATTTTTTCTGTAATGGAGAGATCAGTATATGGGGTTGTTTCATGA
ACCTGTTACTCAATGTTGCTGCCGTTTTTATCGAAAAACTGCCTGTTATTGCTAAGCGGG
GTGCATTCCATCTTGTAGTTTCAACTTAAATATGAGTATTCGAGTTAAGAGTTCAAATCA
GTAAATGCCTGTTATTGCCAAGTGGAGTGCATTTCATCATGTACTTTTAACTTGAATATG
TATTCTAGAGAATTTGAATTGAGTCATTTCATACTAATAACATCCGTCACTACAAACATT
TTGTATTTTTAACTTAAATAGTAATATCTTATAACTTTACATGCCATTTGGCTTTAAATA
CATCTGTTATGTGACTGTTAGGAAGCATGATCAAATTCAAGAAGGGAGAATTGACGAACC
TCAAATCTGGCAATCCAGTCAAAATGCTCATTACTGATACAAGGGTTGGTAGGAACACCA
AGGCTCTGGTTGCTGGTGTGTCTGAAAGAGCATCTAGGCACCCCGATGCTATGGCTTCCG
TTTTCCATGCAGTGGACACTATAAGTGAAGAGCTTTCCAGCATTGTCGAGCTAGCTGCTA
CTGATGAGATAGCCATGACCTCAAAGGAAGAAAAGCTAGCAGAACTCATGGAGATGAACC
AAGGTTTGCTCCAGTGCATGGGAGTCAGCCATTCTTCTATAGAAACCGTGTTGCGCTCGA
CATTGAAATATAACTTGGTCTCAAAGCTCACCGGAGCTGGTGGTGGAGGCTGTGTTTTGA
CGTTGATACCAACTCGTATCCTTTTATATTTTACTCGTGCAGCTTAAACTTATATAGCTT
AAATACAATAAACCCATCATATTATTTCCTTTCAGTTGATTTCTACATGCCATTTTAACT
GCAGGTTCCAGAAATCAAAAAGTGTGCACAATGTAGTCTTTGGCATTAACTGTTAGTGAA
GAATGTTAATTTAAAATGATTTGCCAATAAAAGCTACTCCCTGATTTGCCAATAAAAGCT
ACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTTCGCTAGAGGGCTACATACGAA
GCAAAATGAATAAATCTATACTCTAAAGTATNNNTATATACATCCGTATGTAGTCCTTTT
AATGAAACCTCTTAAAANNNNNNNATTTAGGAACGGAGGGAGTAGATCCTTGTCACTTAT
CATTTTATATGTGAAGATTCTCTGCATTCCTATTTAGTAATTCAGTCAAAACTTATTAAT
GTAGCAAGGAGGAACTGGAAAATTGCTTAATGTTTACTGATGTTTTGTACTTGTAAAGAT
CCTTAAATTTCCCTGTGGTACAACTGTACCCACTTAATGAATAGGTCTGCTAGATGAATG
CGGACCAAGAGTTTCACAATAGATGCATGTCATTCTTGTCTGCTCATCTAATCTAGAATG
CTTATTATATGTTTGGTACTCTTTTGAGTTTCACAAACATTCTGATATCTATAATCCATT
TGTTTGTCTATATCTACCTACTTAGCAGCAATGCTTCCTTGACATAATAAATTCCAGTGT
TGTCCAAGTTAGTTTTGGAGAAGGTCACCACTGAGCTAGAATCGCATGGTTTCCGCTGCT
TCAAAGTCGAGGTTGGTGGACAAGGGCTTCAGCTTCACCAAGGATAAGACGGTCCTCCTC
CTGCTTCAGTGGAGATGTTGTACACTATTTTTAGGTTTTGCTTGACCTATTGAGATCATG
GCATTCTTCCTATTTTGTGCCTAGCAGATCACTCACTGTATCATCAATAAGCTGCTTTTC
AGTCGGATGATTGTTGTTGTATCAAATCAATAAAAAATGTCACATAGATGGGGTTGGAAT
ATTTGAGATACCAGGTTGCATCTCATTCTCATCTGTTGTATCATTACCAAAGCTGTATAC
AGTTGAGCCATTGGAGTAACCCCTGCAATTTGCTTGCTTTTCTTATGCTTGATTCTTACA
TCCTTGCCACCTACTGTTATTGAACATTAGAAATTTTACAAGGCTAGTTGACCACCTTGC
TGGGATTTGAGCTGCGGAATTTAGCTTCTGCCGTGGTGAGTGATTAACAATGATTGATTA
TATTAGAACAACTCCTTGTCAGCCACTCTAGCAGAAGCAATGCTCCAAACTACTTACCAG
TCCATTAAATACACATGAACACATGAAAAAACCTATCAGCTTGTACCTTCAACACATGAA
CACATGAGCAAAGCTCCAAATTACTTACCAGTCCATTAAATCCACATGAACAGTTATGTG
GGCTCTGGCTAAAGTGCAGAGTTTGTGCCCAGGTTTTGTAAATGTTTGTGTAGTTTGCAT
GGTAAAAGTTTAGGAAAATCCTGTCAATCCAATGTGTTCTACAGCATGCAATGCTTGTAC
ATATATTTTGCAATTTGGGTGCAAATGTTCAGCATATGTATATGTATGTGCTATTTATGT
ATTCGTTTTAATGCATACATGGTTGGTATCTTCAAGACTTCAACTGAATCCATAACTATT
TTCCAGCTCTCTTTTTCCTGTGTGATTACTGCCAGTCAAATTTTAGCTTATTCTAGTCTT
GCTGGTGATGCAACTAAAAATATTGCCTAACATGGATGCCTACAGAATTACTGGTGAGGT
ACTAAATAAACTTGTCTGGATAACCTTGCAAAAAACACTTGAATCACGACAGCGATCAGG
AGAAATTCTCGCGTTCTGAACAAGCTCGCAGAACCAGAGAATGCACGGCAATGTACCAAA
CAATCAAGATATCCTTTTCTTGTCTTCCATTCGATCCATCATCTACCTTTGATAGATTTT
CCAACATTCTTCCCATACATCAGGGGAGAGTGCTGTAAGATTAGTTACATGCTACTCAAA
TATTTGCGCATGTCGAAAGGCAATAAAACTAGCCATTCGCTACCACACTGTCGTTGTATC
AGATCCTCACTACTACTTCAGAGAAAAAGTATCATCATATCCTCCGGTCGCCCGTAGTAA
CCCTCAGGGACCAGGACAGCGAAACGCATCCGTGCTCCTTGCAGAGGGTTCACCATGTAA
AGTCAGAAGAATCTTATTGTTGGTTAGCCTGAAAAAAAGGAAACAGTCGCAAGGCTTCAC
TGACGGTGTACAGATTGACAGCAGTGCACCAACGTAAAGAGGGAAGAAATGCTTGTTGAT
AGATAAATAATCTCACCTTGTCTAAGATCCGCACATGCCACGAATCAATCCTGCGAGGTG
AGTTAGGTTGGCCATAGTTTGGACTATTCTGGGCATGGCTCCTTAGGAGAGGCAGCCTTG
CGGGCACTGCATCATCGTCACTGTCGTACTCGATTTCACTGTCGGGGCCAAGGGCCCTGA
GTACCATTGCAAGAATGATTGACAGCACCTGCGAATAATAAAATGTTCATATTATTATTG
TTGTATTACTTACTTGGTTAGTTGCAATTATAATTTTCTCTGAAGTATGATACTATTATT
GTTGCAGTCAGCTCAAGTGGAAAGTGCATGTAAAATTATCATACTATCTACAAGTCTGAT
TTTGGTTATTTGGCAAAGCAACCAGCATTTCCTTTCAGCTAATTTCCACTACATTTTGCC
GCCGTACTTGAAAGCAGATAATTACTCGTCCAATTCCACCGAAGCAAAATTGTAATACTC
CGACAGTCTAATTCGAGCATACTGAGGAGCTGTTCGGTGATCCTCCAGCTCCCTGAAATC
TAAGGATCTGCAGAGCACCCTTTTTCCTGCTCCACGATTTTTACCTGCTGATCTACCAAC
TCCGGGAGTGGAGTTGCGGAGCCGGAGGGCCTCCGAACAGGCCTTGAAAGACCTCCAACT
CATTTACTGATGTACATCTACACAGTTATTTAGTTACAAGCATAGGAAGCAAAAGGTGAA
AAAATTGAATTTCAGAGAATTGCTCACCTGAGCAGCCACCACCGAGAGGGCTACCCATTC
ACATACGTCAAAATTTGATCTCACGAAATGCTTGAATTCATCAAACTTCCCAGATGGGTC
ATCTGGGAAATCCTGTAGGTTTGGGAATTATCAAACCATCACAAATCAAATAGCAGATAT
AATAGAAATAACTAGTTATGTACTAGCAACCGAAGTGCTTTTTACCTCCTCCCAGTAGCT
ATTCAGAAATACATCAGCGGCGATTGCAGCTTCCAGTATGACAAGCAAGAATACAAAGAT
CATGTGCTACATACATGTCAGGTTAAGGCAAAAAGTCCACATCACCAAGCCACTGTACAT
CCATCTAAGGTCATAGAGCTCACTCCCAAGAACATAACTGGGGCTTAAGGTTTCACCAAA
CTATTATTAGGAGCCAACGGTTCCATTTCAAAACTGAACTGCTACAAACATGATGCATCA
GTTTTCTCTTTTTTTTTAAACACCAATTATATTTAAAATGGATATATCTAGAAAAGAAAA
GGCTTTGGTCTTTATGCGACAACGTGAAAGGCATTGAGGCACGTGATTTATAAACCGGTA
GCAGCTATCATGTCAGGCTAGTTAAACACGCTAACGCACTCCGTATGTCAGACGCTTCCA
AGGATACACAAGACAGGCAGGGGCTGTTGGCAGTTTCAGCGGCGATGTGACCTGAGCAGG
TGAGCAAGCACATGATGATCCCCAGGCTGAGAAGAGTGTAGATAAACCTGCACAACAAGT
GAAATTCTTTTATATCAAAACAGACCTTTCATAGTATTTGTATAGTAGCATTACATATAC
GCAAGCAAGGCACCTGAAAATTCCTTGAATACTGGCGGCATGGATTCCTAATTTATCAGG
CCCAACATAAAAAAAGCATGGTATGTAGAATAAGCCATTCGGTGCGTCGACGTCTTAACA
GCAAAACGAGAGGAAGATGCCGGTCACTACAGACGTGTCTAAGTTGGCGAAAGAGATTGT
TGAGCACAAATCGCTGTTGTTTCTTTATCCCCCATGAGTGCTCCAGCATAGCCCACCAAT
CAACCGCACCGCGCAAACAAATACATACATCCATCCTTTTCGTTTGGGCCATCCGTTGGC
CGTTGCATCGCAGTCGTATGACGACACATCGCAGCCGCCACCTAAATTTGTAGAGCGCAA
TTCCACCGTAACCACCGAATGGCACTTGTATCTAGTTGCTTTTTTGTTTCCTGTGCGTCG
TCACTGCACACAAATTCAGTGGAATAGTGGCTGCTGCTGCTGCGTGTCCCGCCCGTCAGC
AGTCGGGGGGAAAAGGGGGACGCTTTTGGGTTTGGGTATGGTTCGGTTCCTACGCCACTT
CCCGATCCTTCTTGCTTTGCTAGTATCTCGTTCGTTCCAGCACGGAGCTGATCCTGATCC
TCCGTCGCTGCTACATCCGATGAAACAGTGCGCTGGCAGGATGCGCGCATTTCACCGGGG
ATTTGATCGGAGGTAGGTGCAGCGGGTATCTGGGCGACGGATTTCGCCGCGAATTCGGTC
GGAGGAATCGGGAGCGGCAGCGGAAATGGGGGGAATAAAGCAGCAAATCATCCAGCAGGA
AGCAGCGACTAGGCGAAAGCAGAGATTGCGACGCGAGTCGCGGCGCTACGCGAGATCCGT
GGAGTTGAGGGAGGAGGAGGAGGAAGGGGGTGGTACGAACCAGGGGGCGGGGAGGTGGCC
GGCGGCCTGCTGGGACCAGGCGCGGAGCACCCAGAGCGCGTAGAGGATGACGGCCATCCC
GGCGAGCCCCACGACGGAGTTGGCCGCCTTGAGCGCCGTCTGCACGCAGCTCCGCACCGC
CGCGCGCCCCGCCA
