Map Locations of contig_37240 (3520 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_37240

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52030 1 2022 bp AK360542 Available Available None





CDS Structure of MLOC_52030






Contig Sequence (3520 bp)

>contig_37240 3520 assembly3_WGSMorex_rbca.fasta
GTCTACATACTGAGCAAAATGATTGAATGTACACTCTAAAGTATGTCTATATACATTCAT
ATGTAGTCCACTAGTGAAATNNNNNNNNNNNNNNNNNNTTAGGAACGGAGGGAGTAGTAG
TAATCTTTGGTGAATAGGATTAGGCAGTTGTAGTGCACATGCGCGTGCGGATGCACCTGC
CGGCTTCAGGTGCTTAGTTATGTATGGTGAAACACACTTGTGTATTTTTCAAAAATAAAA
AAAGAACTTCATTTACGTGGAGGGCAAAATTGGCATTTCAAGTGCGTGAAAGATGCACAA
AATGAAGGGAAAAGAAATAAAGTGATCAAAATGCCAAATCATAGAATTACGGGTGTTTAA
CACGGCAAATTCTCCGAAATGTTAAAGTGGTGTATTCTCAGTATAGCCTTGTAGTAAATC
GAAGCATAAAAAATGACTATCCAATGCAAAACAGAGAGACAAAATGAGATAGAAAACAGA
CATCAAGCAGTCGCTGTATTTGACCAAGCCAGCAATGGCGCCTTTTCCAAGGTACCAGTC
AGAGGGTCAAGTGTTTACTTGCTCTGATGTAGAGAATCCAAAATGATGATGGTGAACGAG
TTAGTTGCTCTGTTTCTAACAGGCTGTACCTCATCGATCATTGTTGTGTTCTTTGTTGGT
TTCACAATCCCAAACTACAGTAGTCTATGGTGGATGCCACCTTAAGAAGGTGGAGCAGGT
ACTAGCTTTTGGAAATAAAACTTGCTCCCTATGTGCTATTCACATTATAAGTGCATGACA
CATGAGATAAAAAACTCATTATTCAATACTAAAAAAGAGATTCAAAGGACAAAAATTATT
GGCTCATAAGCACAGATTACTTTCAAGATAAATCATAAGAGAAGCAGCATTATACCTGTG
GACCACATTTCTCTCATGGAGATAAACCAATCCATTGAGAATCTGCCTTGTGTACGCAGA
GACTTGTGAGTCTCGCAGTTTATACTTTTGATAGAGGGATGAAAGAGAACCTTGTGTAAC
AAGCTCAATAAAAATATAGAGTTTTGATTCTTCCTGCATTTAAGTTTTGAACATCATTAT
ACACAAATAAATAAATTTTTCTATGTGACATAAGGATTGCTTAAACAAAAGAAAAAAAAT
CTAGAATTGCAATGCATAACCTAGGAACATTAAAAGGAGTGTGGAATACCTTGTCAGTTC
CATAATACTGGACTATATTTTCATGTTCAAACTGACTAAGGAGAGCGATTTCCTAAGAAA
CAAAAAAACATAAAATCAGGCGATGAAAAAATATAGCTTTAGAAGATGTCAGAGCATGTG
AAATGTGCATAGAAAATAGTTGATATCACAAAACTAAAACTAGACAAATCAAGAGCAACA
GCTAACCTGTTCAAGTGAAAGAATAGATTGCTGTGCATTGCTTCCTTGGTCAAGCAAAGA
CACTTCCTTAACAGCAAAGAACGCACCTTCACTGCAGAAATATTCAATAACAGACAGCAT
TGATTAAATGCTTATCAAATGGTACAGCTGAAACAAGTACACTGGGTCACTCTTAAGACA
AAGTAATCAGTAATCACTCTACTAGATTCCAGCCTGTGCAGATTATTATGAGCATTATGA
CATATGAACAATCATGGTCAGAACATGTACAGAAGTATGCCATCAGCAAATCAATATTTA
TTGTACCAGACATGTTATTACGGCAGATGGCAGTAACACATCCAGACTGCAGTGATCTGC
TGCCTCGCCTGGTTGCCCTAAATTACAGAAATGGACTTGGTTGCACAAGTCACTGTTCCT
ACCCTTAGAATATAGTAAGGTGTGTACTCCCCCCATTCCTAAATATAAGTCTTTTTAGAG
ATTTCACTAGGAGGCTACATACGGAGCAAAATGAGTGAATCTATATTCTAAAGTATGTCT
ATATACATCCGAATGTAGTCTACTAGTGAAACCTCTAAAAAGACTTAACTGCATCGGAGG
GAGTACATAATAAGGTATGAAGGGCCAAACTTAACTGCATTCCGTACTATATTCTCAATA
CACCATGTTCATGTGTGAGTTTTGTTTTTTTACAAAATTCAGCGACCAGTGTGTATAAGA
TCAGTTCTGAGCACCTCCACCCCAAACTAACACACACATACTTACCTAAATACTCCCTCC
ATCCCAAATTACTTGTCGCAGAAATGGATGTATCTAGAAATATTTTTAGTTATAAATACA
TCCATTTCTATCAATTTTTGCGACCAGTAATTCGGGCCGGATGGAGTAGATGTTTGATAA
TCTATCTGTAGAATGATATAGTGATGTGTACTTGTAAACTCTAGTACATGCTAAATGGTG
TGGTGCTGCCCCCTGTTATAGGGGCGGATGACAGCACAATAAGGCTGTTTGGACTAACTA
AGCTTATCTGTAGACAAACTAACCATAATATAAGGCGAGTAACAAGTTTACTTTCAAGCC
TAAATTAGACACAAGAGCCCAGTACCTCCTTGGACCAGTTAGAAGTTAAAACATATAAGG
TGCATGAACAATAAAATGCCAATAATAACATTGCTACTTACTCACTGATCCCCTCGTACA
CCATCCCGAATGAGCCACTTCCCAGAAGTGCACCACGCATCCATGACTTGATGTTCCGCT
TGAACTTGCCATTCGGTGAGATGACGAACACGGCCTCTGTATTCGTGCTAGATGCATCGT
CATCATTCGTTGTCGACAATGAGGATGTCCCGGTGAACCCTTCAAAGGTCTCCCCAACCC
TCCAGCCTTTCAGCTCCCCCTCAAGCCCTGTCAATCCTTCATCGTTCTCCTCAGGATTAT
CCTCCTCTGTGTCTGACATGGGAGATGCTTCAACATGCTCATAGGTCATTCTCAGTTCAC
TATTCCCCTCCGTGGGAGCGAAAGAGTTCACAATGTCCCAGGCCGATCCGCTCATGATAT
CAGCCACAGACGACTGCCTCGCCGGTGGGGGTGCGAGCCCCGTGATCGGTGGAGGCGGGG
AGAGCACCGGCGGCCGGACGCCCCGGATCCCCACCTCCCCGCCGCCCCTTCTCGGCGAGA
GAAGCGACAAGGCCGCGACGGGCGCCGCAACAGCAACCGCACGGGTTGCTTTGGGGGATT
CCTGCGGTGCCGCAGCGACGGGTTCCTCCACGGAGTCAGTGGCGGTGGAAGCGGAGGAGG
AGTGGATGGACTCCTCGGGAATGGGGTCGGGGAAGGTGTGAGGAGCGGGCCACGGGACCT
CGGGGGCGGAGACGGTTCGGACGACGGGGGCGGGCTCCTCCACGGGAAGAGCCGACGAGT
CCGGGTCCGGACGGGGGCGGGAGAGGAGGTCGGAGCTGGAGCGCGCCTTGCGGGCCTCCC
AGGCGGCGACGGGGATGGCGAACTCCTCCGGCCCCGACAGCCCGAGGCTGCGGCAGAGCT
CGTCGACCTCCCCCTCCGCGCTGCCGTTGATGCGGAAGTCGGCGCCGCCGCCCCTGGCCG
CGAGGTCGAGCGAGCGCGTCGGCCGGCCCCCCGGCGAGCG