Contig Data
morexGenes
Links



Map Locations of contig_372300 (4377 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_372300

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52017 3 1701 bp MLOC_52017.1 Available Available LOC_Os08g31750.1, FRAME:-2, EVALUE:2e-164, 13108.m03291 protein methyltransferase, putative, expressed





CDS Structure of MLOC_52017






Contig Sequence (4377 bp)

>contig_372300 4377 assembly3_WGSMorex_rbca.fasta
ACATTAGTTAGTTAGCTTATTATTTTAACAAATCAAAATAATTATAAAAAGATTAAAGGC
GTGTTGTATTTTTTCTCCCGTTGCAACGCACGGGCCCTTTTGCTAGTAATTTACAAAGCG
CATTGATAATTTACATTTCAGACGGTCCGACATGATAATTTACATTTCAGACGGTCCGAC
ATGCACCTTGCTCGCCTCTGAGAATTCAACAAACTTGAGTCTACAAGTATTTTAGGACCG
CCCGCACCAAGGGGTCTCAAAGGTGAGGTCAGGAACCGAGAAATCCGTCAAGGTTCCTAC
CTCAGCACAAACTCTCCACTAAGACAGTTCGACATCAGTGCCCGGCGATCAATGCTCTTG
AATCAAATCAATACAAGAGCGCACAAAATTTACAGGTTAAGGACCTCCACTGCTTTACAT
GAAGATCTTTTCTTGAACTTTTACATAAATAATTCCTATGATCAATCTCACTATGACGCC
AGTGAAGTAAAATGTACGCTTTCACTATTCACATCACACATACCTTGACCAAAACTATCG
GTGCTGACAGAAAGGGTGGCTCATAAGGAACCTGCAACAAAAAACTCTTTAACATTTAGA
ATAAGAGGGGGAAGATAAACTGACGTCCAATTCATTTAAGTCGATTACCAAACGGTGTAT
TCATGACTTACAATGCATAATCAAGGAGCTATGCGATAATGTTTCAGGTGACTCTGCAGT
TATTTAACTAGCTTGCTTTAGTAGCAGAGAACATTATATAGAATCCATTTCTGACAAATG
TAAAATTAACCAGCCCACATGCTCTACAAAGATCTTCAAGCTCCAGCTCTGATAAGAAGG
TATTGTTGCCTGTGATTTGATCAATGTACTGCAAGATTGTTCAAAGAGATAAGTTTATGA
GGAAACATAGTTGAGCAAGTGAATCTGTAAATAGCAGTATCAGATTCTCTGAAGCTTAAT
CTTCCTTCTGCCAATATGGAGGTATGAAACCATTAAACAATCAATTCTAGATACCTACCA
TGGATCATGGTTGTGAAAATAATAAGCTATAATGTCCCTACAAAGAGAACTATTTGTGGG
TTACTAGGGAGTTGGGAACTCAGGATTACCGGGCGTCCAATCCTCAGTAATGGGATAACT
GGCGGAAGAACATCTGCTATGAAAGTAGAACCGACAAAAATACCCCCAGGGCGAAGGACT
CGACTGATCTCTGCAATCTACAAAAATACTAAAATATTTTAGAACTTTTATCCTTTTGTC
CTATGTACAGCGGTAGCGAATAGCATAAAGTTTATTGCAGTAAACTTATGGATACAGAAA
TTATGGATAAAGAAGCTTGTTGATGCAAACTTACTAACATATACACAGAAAGGAAATAAC
ATAAGCTACAATTTTTTTAGGAAAGTGAAACATTGTTCCCTATTAAATTCATGAGGCAAA
GCTTAATATACTTTTCCAGAAAGCACCTGAAAAAGATTTCTTGCATCTTCTTCTTACTTA
TACCGTTTCCCTGCGTGTGTGATAGTGGGCATGTGCATATTCCCATCGTGATCATAGCGC
TATGCCCATTTCCAAGATCTTTATAACTGAAGCACGCAAACTAGCATATGTTCATGTGTA
TTTTGATTCCATGGTACAATGTGGAGCAACCAAGATGGTATGGCACAATAAAAAAATACA
TAATCAAGGAACAACTGAGGCACAAAAGCACGTTGACCTCTTTGAATATTATAAGAGACA
CTTAAGGAAGAAGAGTATTTTGCAGAAATAAATCTGAACATCCAGTAGGTGTGTAGGACC
CTTACAGCACAAGCTGGGGATGGCCAACAGTGAATTGCAGCACCTGCATGCAGAGCATCA
ATTGAGCCACTCACAAAAGGGAGTCTGGATATATCAGCTCTCACCAATACTAATCGCCTG
AAACAACAGAAAAAAAAACATTGGAATGCTGCATTCAAATATAAAAAAAATCACAGGAAA
AAGCTATAAAGGAGACAAATGACAGCTCAGACCATTAATCGTGTGAGACAAACGAGTTAC
AAAAAGAAACAAAACTTGAACATCAGGAGAACTGTAAACCATACTCGTCTGAGATGTTTT
CCTGCTTGATGAATTCCTTGCATTGCTTCAACATATTCTCGGAGAAATCCAGTGCCACAA
CAAGGCAATATAGTCCGCTTTTAACAAATAATCTTGAAAATAACCCACTTCCACAGCTTG
CGTCAATTATAATCCCTCCACTTGTTGGCTTCAAATAATCTTTAGCCATCTCAAACTGTA
GTTGTATTGTAATGTTTTTAGAAAGTTGAGTAAATATAATTGTAAGCACAAATGATACAT
AATGCTTAAATATGTGCATAAGCAAATTGGATCTGACTAGAGTTCAGACTTAGGGACACG
CTAATTACAAATAAACTAGTCCGCAACTTGTTGTAAGGGTCTATGACCATATTTCTCACA
ATATTTATTTGGTTGGAGCTTGCTAATCTGTAACCATACAAGAGTATATATTAACAGATT
GCTCTGTAGGTACCAATTCTCTCTCTCATAGAGTAACAAAAGGAACCAGTTAGATAATTT
ATACAGTATATAATCTCATAAAATGATAGTCGATCGACATGACCTCTTTCTCTAAGCCTG
GGAAACCACCCCATATGAAATTTTGGCGCCATCCTCTCTCATAAAGAAATGATACCAGTT
GGGTCCTGTTCAAATAATCATACGTAATTAAGGAGTAGTCTGAATAAAACTAATAATTAA
CAAATACACTGCTGTATTCTCCGTCCCAGCTCCCCAGCATTACTAACAACTTGCAAACCT
ATATTGAACCATTCCCAATAGTCCAAGAGGAACACCTTTCATCACACAGCATCTGGCTGG
TCCAACATGTTCAAGGTTTCATGGCCACCGAGTTTTCTTGCAGTGCATGTTATACAGTCC
TAAATTCTAAGACGTGCTTTCTGAGGTTAATTGGTTTATAATCGTTAATTCGTTGTTACT
CTGAAAGAACTGAGACAGAATGCTTAACTACATTATGCTTGGCATAATTCAAAAAGATGG
CCATATCTGCCAGACTCTTTTTTTATATAAGCAAAATGTTTTCCAAGCAACGTGCCAGCC
TTTTATATTGCCATGTGTCCATCTACCATCACGAACTTGCCTAATTTTGAAAGAATAACA
CATTTTACCTGAAAAGCTCAGTTGCAGCAGGCATGGTCTCGGAGTACTCGGTAGAACCAA
CTGCCACAGTCAGATCCCAGTAATCATCCTTAGAGTACAACTTCTTGCAAGTAGGGCATT
CAAGGCTAGAATCGGATTCGGATGGCCTGAAAAGGAGCCGACGAACAATCGCTCAATAGC
ACCCTGCCTGGAATGCAGCTAGCACGCAAATGTAAAGACCACTTACGGCGACCGGTGATC
TATCGAGCTTACGAGCGGGTAATAGCAGATTGGGCAGGCGAGTTTGCTCAGCTCCGCTCT
CACCAAAGATTCCTGCACGAGGGAACTAAGAAAGGCCGGCCTGTAACTTGCTCGATGGAA
TGCGCCAACGGACCGAATACTCACCGCAGCGGCCTCGTCGCGGTCGGGCGCCCCGGTGGT
GGAGGCGCTGGCGTGCAGAGCAGAGCGCGGGAGCATCTTCCGGGAAGCGGAGGCGGTGAC
TCCTGATGCGCCTCCTGCAGGCGCCGCAAGGCAGGGGACAAGGCGACGGCGCCTGCCAAA
GCCGCGCGGCGCAACGATTGCGGCAGCGGAGATGGGTGCGCTTCGGATTGCCGCCATCGT
GGAGTCCAGGTGTGGATGATGCGTGGGAGAGGAGTAGGCAAAAATTGAAATGAAATCGGA
GAGCAGGGGTGTGCGGCCAGGGGCGGAGCCAGGATTCCAACATGTGGCAAAAAGTCTGAC
GACCATCATAGTGAATAAATATTATAATATATTAAGTCACAAAATATATTATAGAAAATT
CATATAAATATTCGAATATATGTTTGATGTTTAGAAAGAAAGTTACATGTTTATTACCTT
AAACTCCACTTTGCGACCACCGGTGTCGAATAACTCTATAATTTCATCAGAACTAATCTT
TGCAGCTATTTCCTTACCAATGTAAACAATCATATAATTCCGAAGATAATCATCTCCCAT
TCTACTTCGAAGACGTGTCTTGATAAGTTTCATGGCCGAGAAAGCTCGCTCGGTGGTTGC
AGTTGACACTGAAAGAGTTATGACCAACCGCAATAATCTATCAACCATTGAGTATATAGC
AGCCTTACTTGTTTTATATAGTGCAACTGTCAAATCAGCAAGCGAAGACAAGCATTTCAG
CTCTGGATTATTGCAAACATCCAACTGAAAGTGGGGAAGCTGCGACTCAAGTTGAGC