Map Locations of contig_37221 (5730 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37221

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52004 1 2326 bp AK366653 Available Available None





CDS Structure of MLOC_52004






Contig Sequence (5730 bp)

>contig_37221 5730 assembly3_WGSMorex_rbca.fasta
TCTCGTCCCCTCCCCCGCCCCCCGCCGGCGGGAGCTATGACCCCGACGACGAGTTCTTCG
ACGAGATCGACCGCGCTATTGCCGAGAAGAGGGAGGAGTTCACGCGGCGCGGGCTCATTA
AGCCGACCCCGCCTCCCCCGCCCGAGGTGGACGTCCCCGCCGACGAGCTGTCCCCCGAGG
AGGCCATCGACCTCGACGAGATTCGGAGGCTGCAGGGCCTCAGTGTGGCGTCCGTGGCCG
ACGAGGAGGACGACGAAGCCGAGGGGGGCGAGGAGGAGTACGGCGACGAGGGCTTGCTGC
TCGACGAAGACGGCGAAGGCTTTGATGTGGCGGAGGAGCTCGGCCTGGAGGCGGACAGGA
TACGGCAGCCCGCCTTCCGCATGACGCTGGCCGAGCTCCTCGACGAGAGCAAGCTGGTCC
CGGTAGCGGTGACGGGCGACCAGGACGTCGCGCTCTCGGGGGTGCAGAGCGACGCCACCC
TCGTGGCGGCCGGGGACCTCTTCGTGTGCGTCGGAGAGAGCGGGCTTGCTGGGCTCACCG
AGGCTGACAAGCGCGGTGCCGTCGCCGTCGTGGCCGACCAGGACGTGGACATCGAGGGCA
CTCTGGCCTGTCGCGCTCTGGTTATCGTCGATGACATCACGGCCGCTCTCCGCGTGCTCC
CTGCCTGCCTCTACGGACGGCCCTCCAAGGACATGGCTGTTATTGGCATCACGGGCACAG
ACGGGGTCACCACCACGTCCCACCTCGTCAAAGCAATGTACGAGGCCATGGGTGTCAGGA
CCGGCATGGTAGGCGTTCTCGGAGCATATGCCTTCGGCACCAACAAGCTGGATGCGCAGC
CTGCTGCATCAGGTGATTCAATGGCCGTGCAGAAGCTGATGGCAACGATGTTGCACAATG
GCGCTGAAGCGGTTGTGTTGGAGAAGACCACTGATGAGATGCTACCATCAGGTGTGGACA
GTGAGATAGATTACGATATTGCCGTGCTGACCAATGTTAGGCATGGCAATTTGGAGGCTA
GCATGACATACGAGGGGTACATGAGCAGCATGGCTTCCCTTTTCTCCAGAATGGTGGACC
CTGAGCGCCACCGTAAGGTGGTAAACATCGATGATCCGAGCGCACCATTCTTTGCCGCCC
AAGGCGGGCATGGTGTCCCGGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGC
ACACTCTCAAGTACCAGCTTTCTCTGTTTGAGACCGAGGTTCTGGTACAGACACCGCACG
GAATCCTTGAAATTTCCTCTGGATTGCTCGGAAGAGACAACATCTACAATATTCTTGCAA
CTGTGGCAGTTGGTGTTGCAGTGGGTGCGCCATTGGAGGACATAGTGAAAGGTATTGAAG
AGGTGGATGCAATCCCAGGTCGGTGTGAGCTAATTGACGAGGAGCAAGCCTTTGGGGTGA
TCATTGATCATGCGAGGACACCGGAGGCTCTGTCAAGGCTTCTTGACAGTGTAAAGGAAC
TAGGCCCACGGCGTATTGTCACTGGTATGATACTTTCTCTCATACTTCTCATTAACACAC
TTCCTCCACAAAGTTATATTGGTTTCAAACTCTTAATTTGCTGTACGATCTGCTATATGT
TCTCTATTCGGGTTGTGGTATTACAAACTGAGCCTCCTGGTATGTTGTTGTCTGTAGTTG
TTGGATGTTGCGGTGAGAAAGAAAGAGGGAAGAGGCCGATGATGACAAAGATTGCCGCTG
AGAAAAGTGATGTTGTTATGTTGACATCCGACAATCCAGCAAGTGAAGATCCCTGTATGG
TTCTAAGCATATTTGGTTATGAGATCCTAATGTTATTAAACACATGAGTGAGCTGAAGTT
TTACACATTTCTTGGTCTATTCTGAGCAGTGGATATCCTGGACGATATGTTGTCTGGTGT
AGGATGGACCATGGAAGAATACTTGAAACATGGTGCAAATGATTATTACCCGCCCCTACC
AAATGGTCACAGGCTCTTCTTACATGATGTTAGAAGAGTTGCAGTGCGAGCTGCTGTTGC
AATGGGCGAGCAAGGCGATGTTGTTGTAAGTTTTCTATGATTTTCTTCACTATAAGGAAA
GCTTTGCTGTTGTCCATAGTCACCGTATAATCCTATGTGAAGAAATTGTTGAAATATGCT
ACACTTGAACCTCCATGCCATGCGTAGGATCCTGTGTAAAAATGCTTACAGAAGCTGATC
TTGGCTCTTGTGTCTTGTCAGATTCCAACTATAATGATTTCAAATATCTAATCCCAAATG
TATTAATCAATTCGAATGTAGAACATGATCAGACAGATTGAAAGTAGATTATTGTGTTAC
TACTATCTGGGGCAAACTTAATGTCCTAGTCTTCCGCAAAAAAGAAAAGAAAGAACTTAA
TGTCCTAGCGAACAACTAAGGAGTTGCATTAATGTTATTGTGTGAGATAGAAGGTTTGAC
CCTCCAGGTGATAACATGTACTATATTTTTACTACTGACCATCTTCCACTTGTTGGTCCA
TCTTGATCCTTATTCCTGATTGCTTTGGTTCATCCTTCAGGTTGTCACTGGAAAGGGGAA
TGATACTTATCAGATGGAAGGCGATAAGAAGGAGTTCTTTGATGATAGGGAAGAGTGCCG
AGAAGCACTGCAATACGTCGATCAATTGCATCAATCTGGAATAGATACCTCTGAGTTTCC
ATGGCGGTACGTTTCCTTCTAAATCAGTTTTGTCCCGTTCTCAGGGCTTCACCCCTCATG
ATTCATGAGTATGTGCTTGTTGCCATAAGGCATTGCCTCTGTTTTTTCATGTCCTATAAA
AATACAAGCCCCCACCAAAACACCCAAAGGAATCACATGCTATAAATTTCAGTCCAATTC
GCGTGATCTACCTTGCATTTTGTGATGTTCAGCTTTTGCATAACTTGCCCTGACCACATT
TGTATTACATCAGAGATTCTGCTGTACCAAATTTCCTCTTTTGCGATGTAGTTTCACATG
AAAACTACCGGTTTACTGATCTTGCTTCTCTCTGGCTGCCACAGGTTACCAGAAAGCCAC
TGATTGTGATGTACCCCAGAGATGGCCGAGCTTCTCAAAGATAGACTAGCCGATCTGATC
CAGCTTTTGCTCCATGTTCTAACCTTGGTTGCTGACTGCTAACAAACAACTAGCTTATGA
ACATCATTGATGATAACTGGAGAGTAGATAAGTAGATGGCCTTGAAAACTGTGAGTTATT
TTACGGTACATTAAAGGCACACCAGAATGGAAAAAAGCGATTTCCCCAATGGCAGTTTTC
TTGTGCAAAATCTCATGGAATACAAATGAGTCATGTGTAGTGTGTAACATAGTTCACTGC
TTATGTTCTCTTTTGTTTTTCAAGAGCATTGGGAGAGAGGCAAATCAGCTACAGAGATTA
ACAATAAATAATTATAGTAACTAAGATGTCCAAATTTAATACTTTTACACATAAATGCAC
TACTAGCAACGTCAATCTTTTTGGACATAAATCTTAGACCCATCATATTCTTGGTTTTGG
TAAAATTTGATTTGAGTATGTATAGGGGAAAGTAAGATTTGTTTTTTATTTATTTAGGAG
GGGTTTTGATGAGATTTGATTTTATTTGAGCATGAGTAGGGGAAGGCAAGTAAATCTTCA
TTTTAATTGAGGTTTTGCTTTTGATTTGATTGAGTTAATGTAGGCCCGGGGGAAGCCAAG
TAAAGCTTCAATTTAATTGAGGTTTTGCTTTTGATTCGATTCAGTTAATGTAGGCCCGGG
GGTGGGGGTGGGTTGGAGGCGAACACCTTTACAAATAGTAGAGATGTGTGCTTTGCTGCC
CTGCTCTTTCACCATGGGGTCCATTTCCCCCCTCTTGACTGTTGCAGTTTCTTGGGTTTT
TAATGGATCCCTGATTACTTTCTAACGGGTTGTTCAGTTTTTGGGTCTATTCTCTGGCCA
TCATTTCTCTGTATTCTTTTCTGGAAGAGTGGTGTTCGGGTTTCGCCTGCATGAAGCATC
GTCAGCTCCCACATCAATAGCCTCTCCCGTGCCCGCAACATCAGTTGCCTCTCCCCCCTA
CCACTTTCGCTATACTACAATGCAACCAAAAACAACATGTAACGATGAAATAGAAGACAT
GTGTGCCGTGCAACAATGACATGGAATGGTGAAACACAAGATGTGTGCCCTACAAGTGAA
CCATGGACTGTAGCAACAAACAATCCTTGCTCACCGTCTACTTCATGGATTGAGATCCTA
CATGCAGTATCACAGATGACATGTGGGGTCGGAGGGCACGCAACAATAACCTTTACTACA
ATACAACTATAGAGGATCTTGACTCTTACATCGCCCACCCACCCTGGCGCGAGAACACCT
TTCCTGGTTGAGAGAATTTCTTATTTGGCCCCTAATTTTTGTTTCTTCCCAATTTGACAA
TATATGAAGACTTTGTTCCCATGTGACACTTTCTGGCTACTAATGGTGTTAACCTTGAAG
TGAAAAGACTATTGCCCTTGATGTTGTACAACACTGGAAAAAGGGAGCCTGCATTTCTTC
TCCCCGAACTTGGTGACCTGGGGTTGAGCACCTAGTGTGCATAAGGCGCTGCTGCCCAAC
GATTGTTCCTAGACTAAATTATGTGCTTCTGCGTGCCACATGTACTCACTCCGTTCTAAA
ATATAAGACATTTTAGAGATTTCATTATAAATTACATACAAAGCAAAATGAATGAANNNN
NNNNNNNNNNNNNNNCTATATACATTTGTATGTAGTCCATAGTAAAATCTCTAAAAGGTC
TTATATTTAGGTACACAGGGAGTAGCTCCCAAGTCCCTCTCGTGTACCCGGCTAAAATCT
CTAAAAGGACCGTAACTTTTTTTGTAACGTCACCAAAGGGGGAGGGGAGAGTTTCCCCGG
CTAAAATTTCATTTAGAAAAATGAGGTTTTACAAAGCGACTGTTTATCGTGAGTAGATGA
AGTCATTCCATAGGCTCGCATCACTTCTCAGCTCATGAGCTTTTAATCTATGTGACCACT
GAATTAAATCAGGGATTGCATTAGAGAGCACAAGAACCGGTGCTAAGTGAAATTATATGA
ATACCTGAGCATTCTTGGTGTCCCAAATCTTCGAGAGGATCACTAGAGTCATGAATGGTT
GGAGTGAAACAGGCAGATGTGATGGGATGGTGATCTTCCAAATGAATTTGATGTCATTGT
AGTTTGGCCTGATGCCAAGGGCACGCCATCCATATTTTACTTTGAAGCATAGAAGCAACA
AGTGTGTGCATGTTTCGTGTGTTGCAGTCACACATGGCACTTGTCCGACGGTAGGATGGT
TTATTTATGAAGGTCTTTGTAGGTGTTGAGCTTCTCATTGTGCACTAGCCGCCCAAAAAC
CTTTATTTTGTCCAGAACCTTGGAGGGCCAGACCAAGGATAGAGTCGGATCGTCGATAAG
TTTGTACATGGTGAAGTATGCCACTTCTGTTGAGAAGGGTTTTCCACCAACAATAGTTTG
CTTATTAGGCAGTTCCACGGGCACCACCCCCTGTAGTAGAGCACGGACGGACCCCCTCCC
CCCCTCCCCGGTGAACTTAGTCTAAGGTGCATCGCTGTTGAGGCTAAAAAGTCAAGCGCC
AAGCCCATTTACACCTCAAGAGAGGTCTGTGACAGTCCGATGCCGACGTTCCAGAAGATT
CCCATTCTATTCTGTTTTCGTCGTGTGTCT