| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_37167
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_51937 |
1 |
1698 bp |
MLOC_51937.1 |
Available |
Available |
LOC_Os03g16080.1, FRAME:+2, EVALUE:0.0, 13103.m01900 protein mitochondrial carrier protein, putative, expressed |
| MLOC_51938 |
7 |
2576 bp |
MLOC_51938.1 |
Available |
Available |
LOC_Os03g16090.1, FRAME:-3, EVALUE:0.0, 13103.m01902 protein LIM domain-containing protein, putative, expressed |
CDS Structure of MLOC_51937
CDS Structure of MLOC_51938
Contig Sequence (10864 bp)
>contig_37167 10864 assembly3_WGSMorex_rbca.fasta
AAGAGTTTCACTAATGGACTACATACTGATGTATATAGACATATTTTAGANNNNNNNTTC
ACTCATTTTGCTCCGTATATAGACACCTAGTGAAATATNNNNNNNNNNNNNTATTTAGGT
ACGGAGGGAGTATGATACTACCCATTACAACCAGCCAAAAAAAGATCTTATCAACCAGAT
GCTAAGTATATACCGTTACTGGTGGGAGCGTCTCTTTCTCTCCAAGTCGGTCTCGGCTTT
CACCACGCCGCTCCCTCCCCTGCGTCTTTATTCGCGCCCGCCGACCCACGCCGGAAACGG
AAAATTAAAAAAACACCCCCAAACCCTAAAGCCCTGCGCCCACAGTCCGCCCCAAACTCT
AGGGTTTAGTGACGACCGCCTTCTCTTCGCGCGATCCGGTCACCCGCGTTAGTGTCCACG
CCCCAGAGGCGGCGGTGGGCTGGCGACGAGGGAGGGGGCGGCGGATGCAGACGGAGGCGA
GCGTGGGGATGGCCGCCGCGACCGTGGACGGCGCCGCCGCCGTCGCCGCGCGGAGGGACT
CGACGCAACAGCCGCAGCCGCAGCCGCAGCAGCACCACAACCAGCCCAAGCTTGGGACGA
CGCTCCACCTCCTCGCCGGCGGCGTCGCCGGCGCCGTCAGCAAGACCTGCACTGCGCCGC
TCGCCCGCCTCACCATCCTATTTCAGGTGCGCCTCTTATCCAGAGTGCCCAATCGTCCTT
ACCCCAGAGTGCCCGTATCAATTTTTTTTCACCAGATTGCTCTAGCCTCTAGTGCTAACT
GTTGGCCTGTATATTAGTATAAGCAACCGAGTGACATCTTTTACTTAATTGAGCTTCTTG
GGAATGACTCTGCTTTGGGATACCGGAGAAATGGGAATTTTGATGCATTTTTGGACCAAT
TCTAGCACTAAGGCAAAAGAAAAAACAAACTGTAAAGACAAACCAAATCCTAATGCACAT
ATATATATATATGACTTGTGCTGCGGTACGATGGCGTGTATGCACGGCACACTCCATGCC
GTACACCTCAGCCGGATGTTATCATGACCTTGTGTGCACATGGACGTGGCTCCGGACAGT
GCTGAACCCCGTTTGCGCTCATGCCAGAGTTAGTGATAGTATGCTTGCCATTGAGATTTG
TATCATTTCTATGCGCAGGTACAAGGAATGCACTCAGATGTGGCTACCATGCGCAACACT
AGTATATGGCGTGAAGCGTCGCGCATTGTCTATGAAGAAGGGCTACGAGCCTTCTGGAAA
GGAAATCTTGTAACTATTGCACATCGGTTACCTTACTCCTCAATTAGTTTCTATACTTAT
GAGAGATATAAGAATGTAAGTACAAGTGTTTTTGTATAAAATTCACATGCAATTCTTTGT
CACTTATGATATGTGCTTAATTTGATTAATGTTGAGTGTGCAGTGGCTTCAGATGATACC
TGGTCTCGACAACAGTGGTGGATTAGGTGCCGATGTTGGTGTCAGAATGGTAGGCGGTGG
CTTGTCTGGGATAACTGCAGCTTCTTTGACATATCCACTGGACTTGGTACGGACACGTCT
GGCTGCTCAGGTAAGCTGCTATCACTAACTGTAGAAATTCAAAGAAACTGTTTTGAAATT
TTCACTCGAAACATGAAATGCATGTGATCAAATTAATATCTGTTTGGAGAAGACTACAGT
TCCAATAACATGGTTGATGATTCTCATTTTTTATTGGAGAGAAGTAACACTTTGGTCACC
TCTTGTCATGCCCTGCAAAAATTATTAGTAAACAAACTGTTTGATGTTAGCGTTCTTGAC
ATACTGCTGGATGAGGACAGATAACTGCCAGCAATAAAACCTGGTGATGCCCATGCCAAA
CGCTAACATACACATCCTGCATATTCTTCCCCCTCCCCCCTCATCTTCCCTTTTATTGCC
TTGCGGTCTGGATAGGAAGTTATTTGCTTTGAGCATACTTGAAGACTGTTTCCAACATTG
TCTTACAGTGTTCAGCTAGGCATCTGAACCAATTTTTCTTTTTCAATTGAATGATTGCAG
ACGAACACAGCCTACTACAGGGGCATATCTCATGCTCTTTTTGCGATCTGCAGAGATGAG
GGTCCCAGAGGGTTGTACAAGGGTCTTGGTCCCACTTTACTGGTATGAACATTTGGCACT
TATTTGATTTTCCAGTTTATTGAGCTTTTCTATTGTAAAATCTCATTTTTGGTGATTCTT
TGAAATACAGGGAGTAGGCCCCAGTATAGCAATAAGCTTCTCAGTTTATGAAACTCTACG
TTCGCATTGGCTACTAGAGAGGTAAGTTGTACAGGATACGTGTTGGGTCATATTCATGCA
ACTTCGTATCAATTTAATTTGTGTTACCTGGAATTCTTTTCAGGCCATATGATTCCCCTA
TCTTTATCAGTTTGGCTTGTGGAAGTCTTTCAGGAGTTGCATCATCAACTAGTAAGTGAT
CTATAAATAAACTGCCCTTGTTACCATAAACTCATTGATAATCTAGTGGGCTCGATCAGA
TTCTCAGAAACTGACTGGGCCAGTTCCATGCTGGAAAATACTTAGTTTTCAAAGAAAAGG
CTAAATGCCTATATTTCTGTATGTAAAAATTCCCACCAAGTCTCTAGATCGTCAATGGTA
TGTGTACCTTGTAATGTTGTTAAACTAGAAATGAGGAATAATATCATCTGTATTGCTAAG
ACTGAGTTTGTGGTTGCTAAACTGTGATGTGCTCAACATATTTTATGGTCTGCTGTGGGA
TTGTAACCGTGGAGATAGGAAAAAGCTTGTTAGCCAAACGATAGATAGGACAAAGCTTGT
TAGCCAAAAGGGATTATCATAATTGTATGCAAATGTTAAACAATAAACATAGCCTATCAA
TGCAAATTTTCTGAAAAAGAGTTGACACGATTAAAATGTTTACCTGCATATGAAATTATA
TGCAAGTGAGACAGATACTTGTCTTGTTAACAAATTGTCATGTAGTCCCTCTGTCCCATA
ATATAAAAACGACCTGCATATGAAATTATATGCAAGTGAGACAGATACTTGTCTTGTTAA
CAAATTGTCATGTAGTCCCTCCGTCCCATAATATAAAAACGTTTTGCAAAGCTAAAACAG
CTAGCTTGCAAAAACGTTCTTATATTATGGGACGGAGAGAGTAAATGATATTAGTATTTT
TTGTTTGTTACTTGACAATTGCCTATTCCTTTTAATTTGGTCTCAAGTAATTTTGTATGT
AAACTTCAAACAAGAAAGGCGTTCTTATTTGAATTACCATAGAAACAGTACCTTATTCTT
TGTTATTATTATACTGAACATGGTCCTGTCAAACTTAATGAACATTGTTTTGATCATTTA
CGTTTATTATATTCCAGTTACCTTTCCATTGGATCTTGTAAGACGCCGCAAGCAGTTGGA
AGGTGCAGCTGGGAGGGCCAATGTTTACAAGACAGGACTTGTTGGAACGTTTGGGCATAT
TATTCAGACAGAAGGTTATAGAGGGTTGTATAGAGGGATCTTGCCTGAGTACTGCAAAGT
GGTTCCAAGCGTTGGCCTCATTTTTATGACATACGAGACACTGAAGTCCATGTTCGCAGG
AGGGGCATCAGATGAATAGATCTCCAAAGTCCGATCATGCTTGACAGTTTTGACACCTGG
GCCAGAGTAGCATTGGAGGTTATTAGGGAGGGAGGGGGAGGAAGAGATGTGTTTGTAGCA
TATGGTAGGATTTAGGTGGTGCTAAATTTTGGAGTTCATTACGTAGCAGTATCATCAGAC
AATATTTATATGGCTATAGGTTTTCTTGTAGTGCACCCAAGAAGATCAGTAAGTGCCATA
GGTCTACCAAAATTTTGCTGTCCACCCTTGTTTTGTGTATGTTCACGTTTTCAGTTGGTA
ATGTACTGGCTACCATCTTCAGCCTGACAATTTCATACCTCTGGAGCACGGCCTCTGATA
TAATTTATGTTGTTATACAGTGAGGTTATGACTTATGACCCGTGATTTTGGTTGTAACAT
TGCAATTAGTCTTGTCATTCAGTCATCTTGATATGGATCTTGGATCTGTTTGGTTTATGC
CTGTAATGTACCTCAATTGTACAATGCCAATGCTCATTTGATTTATATATGTTGGGTTAT
CTTCTCTTTTGTTAAACTTTTTGATGTATGGATCCTCTTCTCTTATGTTAAATTGTCTGG
TGTACCAATGTTCCAAATTACTGGGTCGGCATTGTAAAAGAGTTCAACTTCCTCGTACCT
CATCCTCGCATGGTCATTATGTACTTGTACCAGAGTATTGGAAATTCTAGAATTACTTTA
GCTGTTCATACACCAGGACTGATTTATTGCATTTCTGTTTCTTATCCTGAATGAGCTGGT
GGCCCTTTACATAAAACAACAACCAAGCAACTCATGGTGATGACAAAATCGAGACTTTGT
TGAAATATATGCTAATGTGTTATATGCTGCAGAGGCAGCCCAGCATCAGTCCTGGTGTGT
GAACTGCAAGAACTGATCCACAGAAGACGGTAACTGTCTCCTCTTCTCAAAAGGTAAACT
TAGTTTGATGTTTCATTCTCCCTATGAATGATGTCATTTGGTTCCATTTCTGACTTACAC
TTAGTTAAGAACTGTCTAACTAATGTGAAGCCACTGATTGGGGCTAATGGATAGGTTAGT
TAAGTCTTCTTAAGATGTGTTGGATTCGAGGTTAATGTTTTTTCTATAGGTAAGCTTATT
AATTAGGTTACTTCAGATTTTTTTTCCATTGCACTTCGCCTTATTGGTGCTCATGCTTAT
GTGCACATCAATAATAGACAACTTGACTTTACACATATACATACATAAATACCTCAATAC
ATTAGCATTGGCAATGCTGCTAGTTACATTGGTGTTTCTTATCTCATCTTATTACACCTT
CCATCCTGTTACTTCGAGTAAATGCAGTTCCTTTCCTGATTCACTCTGAATGACCCCTCT
GAAAAGGCAAGGTCACTGAAATCTGAACCCTTCTTCTGTAGCACATCCATCTCCTTATGT
ATGTGCATATGATCTCTGCATTTCTCCGATATGGACATGGTGTTTCCTTGTGTTACACAG
GAAAACCTCCAGTTAAACGTATATGGTTCAGTGTTTGGCGAAGGCCATACTTGTTGACAG
CTTTATAGGCAGTTCTGAATCCGTCACCATATGCTGTTGAGGTGTCATTGGCAATCTGAT
GCATGAAGAACTCGCCGAGCTTCTTCTCAGTGTGAGATATGCCACCCTTCTTGGATGATG
GTGGTCGATACGAGGAAGACGACGACGATGAAGCGTAAGAGGTTGAAGGTTGGGCGTGTC
TTGTAGAAGCTGGAAGAATCTCTGACTCTAGCCACAAGTAAGACATGACTTGGCATATAC
CCTCCTCAACCTCTGGGCTTAGGTTTCGGTAACCTGAAGGTGCCATGTATTCAGATCAAA
TTATAGAAATACGGCCATGGAATGTTCAGTCAGCACAGGTTGTTCATACACGTACCTTTG
AGGCGCAACCACCCGTGCATCAATTCATGGGCAAGGATGGAGCCAGTTAGTAGCCTGCAA
TCATGTGGGGAATATTTTGATTTTATACGAATGACGCACCAGTCATAGAATGACAAAGAA
CTCCAGCATTTGGTTCTCATCTCAGTGAAGAATGAACTGACCTGGGGAGTCCATACAAGA
CAAGAATTGCAGTGACTTCACATCGCCGAGTCAGCTTTTGTGGCTGGGTTCTCATATCTA
GTAACCTATGTCCACCAATCCTGGGTCTTCTAAGTATCTGAGTAGCCAAGCCGCAGAGGG
TCAAAAAGAATCATCTACTGGATAATTTGACCCCTAAAAGTCAATTTGGGCTGAGAGGTT
GTACTCACACTGCTCACAGTCTGCTCCTCCGACAGACACAAGCCTCTTGTTTCAGGCATG
TGGTGAGGACCCTGCAGAAGTGAATATGATCATTAACATTTGCAACGCTTCGATTTGCTT
CGACGATCAAAGGAACATAAGAACTCACTTTGCACTCTCCTTCCATTGCCTCGTTGAGGG
CTTGCCGTTCAACCAGGAGCATGGGTATCTGCTGGTCGAGTTTCATGTTCATCCCTTCGT
AGTAGTCTCTGATGGAATGGTACAGGGGCTGGCATTCACCGGTGTCCATGACCGCAGAAT
CCAGGCATTCCATGCACAAACTGCGGCCGTCTCCCAGCGACATATACTTTGTGTTCCTTG
GCTGTAGCATTTGCAAAAGAAAGTTTCGTGGTTGGAGAGGCGATTCGAGGAATTAAAATG
CAGGACTATCACCCTAAAGGTTGTGGATGTTTGGCAACGCACTTATATAACTGGCAGTTC
AAGCATTCATCTCCTGAAAATTGAAGGAAAAGCAGAAGGGAAGATTTTTACCTCCATTTT
CTCACAGCTACAGCAACGAGGTGTGCGGTCAAGCTCATGTGAGGGGCAATACTTCTGGCC
CCAGAATGGATGGGCTCTGTACTCTATCAAGCCTGTCCTGTTCGTTGCGATCTGCAGAAA
TGCACGCACAAAGAAATCAAGTTACATGCTAATCCAAACATCAGCTCTAGCTCTTGTCAA
ACGGAGTTCATTCATAGAAGAGTCTTACAAATTGAAGGCAGACATCACATTTCGGGTGGT
GTAGCTCCTTGTAGCACAACTTGTGGTATGGCTCTGCGCCTAGCAAGGTGAACTGGAAAC
ACAAAGATAGAGAAAACGGGTGACGGTCACTTTCTATTTCAATGGATCTGTAGCTCAAGG
CTTAAAGGGAGTGTAGGATGGTCACCTCAGTCTCACGGATAGGGTGGGTGCAGGAAGAGC
AACGGAAGCACTGAGGATGCCAGTACATCCCCATGCAGCTCAAGTAATGGCCATGTCCAA
CCTCATGCTTGCAGCCACCACAGACCCTGCAGGATGTACATAGCTTCTTCACACACTAGC
TCTTTCAAGGACAGTGGAGGAAAGGCAACGAATAAAGTTATGCAGCTAACCTTTGCCCTC
TAGGCAAGGCCTGGGAGGGGGCGGGGGCGGGGGCATAGGGGTTGTGTGGCATGTAAGGAT
TCATGTTCAGACTATCCTGCATTGCCTTGGCGAGGTCTTCATCGTTCTCTCCCTTGTTAT
GGTTTCGCTCTGTATCGGAATTCAACCGAAATCACACACTCTTACGAGATTGTTAACCAG
AAATGCGTGACGGACAGGGTTACATTGCTGTATATGTGTACCTTTAGGACGTTTGGCTTC
CTCTGCAAGAGAGAGTGCAATCTGACGGTCCAATTCTTCATTGTCATGTCTAGGTGGATC
TTCCCTCTGGAAACAGTGAAAAAAAAAGGTTTAAGCAGCCAGTTGTTCCATGATCGCACA
AAATAGGTTAATATGAAGTGCTTGAATAAATGTGGGGGTGAATTGAATGTGACTCATGCA
TTGTAATTTCAGGAAGATATGGGCAACTGAAGAAAAATGGCAGACTCTGGCAAGGAGAGG
GTATCAGCACCTTTGGCCTGACTGGTTCATGTTGCCAGAGCGAGCTCTCTTCTCCCGCCG
TCACCCGAGGCCGCCGCCGGTGGTTTGACTCCACGGGCTTCGTTCCCTTGAGGAAATTGC
AGAGCCACTTCATGAAGCTGGATCTCCTTTCTGTGTACAGCAACGTTACATTAACATCAA
ATAGGCCCAAGCGAAATGTCAGCAGGATTTCAAGCAAGTGGCTCAACTGAATAGTGGAGA
GCAACGCCCTACCAACTAATCCCTGTAAGGCGAAAGTTTGGAGTGACTATTGTCAGATAG
AAGCTTTAGAACTCTCATGAGCAGCTCTGAACCTTCACGAGCCGACACTCTGACAGTTAT
ATGTATATTGAATTTCAGTCACTACTATATGCCATGCGCAGACTACAGGAACTGTTCTTG
TTTGCATCATGGAAATCCACTCGAATGAAATCAGCTCTTAACTACAGTTTTTTCTACTTT
TTATTATTGTTTTTTATATGGGGCGTTTAATGGGAACATTATTGAAAAAAGGCCAGATGA
CGAATACGGAATACCTGCATTGAACAGGATCAAGTAACACATACGGAAATTGCTTGGGTT
GCTAACATGGCCGCCTCTACGCCGTGCTAATCACAGTTATATATCTTCCTTTTCTTTTCA
GTGCTACCACCGATTCATCCACCGACAGCAACGCAGGCGCGGCCAGGGTCAGGGTCAGTC
ACCATCTTGGTGGACCTTGGTTTATCCTGGATTGTAAGAGTCAGTTTCAGTCTAACTCCC
CCTCTTGCATGACTGTCAGAAAATGTTGATTCAAAGCCTTTGCTACATTGATTGATTGCA
ACACAGTTTTCTCCACGCTATTAGCATGGGCTAGTGACTGTACATGATGTGACCGGCCTA
ATGGATATCAGTCTCAAAATACAGTAAGTGCATAAGAAAAAATGGTTCGTTAGCCCACAC
GTGGATCGACCGGTAAAATAATCGAAGTTTGCTATGAAAGGGATAGAGCAAAACACAGCA
GACAGAGACTAAACTGATTGTCGTCTTACGTTTCACAGAAAAGATAGCTGAAAACTCATC
TCGCCTTTTCTCAGCTCGCTTCCTTTTGTCCTGCACCTATGTATGTTGTTAAATGGATCG
CCGACGGTTTACTCTGCGTTCTCTAATCTAAAAGTTGAAACGAACCCACGATTCAAATCG
AAAGGCAGCAAACAGAAGCTCAACCTCTAGCGAGGGAAAACAAGGACAAGGAGAACGACG
GCTGGTGGCGCCGAAGTACGTGCGTAAAATCTAGGAGCAACCATGCACGTACGGTAGTGA
AAATAGAAGAGCAGAGAGTTGTGATTACCGTGGCCGCCGCACTGGTTATAAGCCCTGGAG
GGGTGGTAGGCCATCTACTGAGGAAGCACCGGTGTCCGAACCCGGCATATATATACACGA
CGCACCGCGCTGACAGCCGTCGAGGAATAACAGCGGTGGCAAGAAGAACGGCGGCGATCA
CGATGTTTGCGGGGAGGATGCAGGGGAGGGGGGAGGAGGATCGAGAGGCAAGAGGAGCTG
GAATGGACGGAGGAGGAGGAGGGAGGGGGAGAGGGGGGGCTTAAGTTCTTGGAGAATAAA
GCTATGTGGTGGTGGAGTTGGCGGCGACAGAAAGGAAAGGATTGAGGGTGAAGCGAAGGG
CGGCCGGCCGCCCACACCTCACGGACGGCATCTCGGCTTCCCGGCGTAAAAGCAACCAAG
GGCGAGAGATTAGCGCGATCCCGGCCGTCGGCTTTAGGAAATTCTCTTCGCCGCTGGCTG
GCTGGCGCCAGTTGATGGCGCATTAGCGGTGGGCGAACGCACGGCCGGGGGGGGGGGGGG
GGGCGAATAATTTGCTGGTCTCGTGCTGGGCGGAGGGGAAAGAGGAGGGAGGAGAGATTC
GTTGTGTCAACGGGAATGTATGCCCCTCGTTGGCTTTTCGGTTTTGTTATGGTGTATGCA
TGTTTTTTTTTTCGTGGAGGATGATATGCTCCGGAGAGACGCGGGAACGGGGGAGAGAAG
GAGGAGGACGATGCGGGAAGAGTACGCTTGCTTGGAATGAATTCTCGGGGGGAACCGAAA
AGGGCCGCGCGCGCACCCCCGAAAGCTGCCGCTGGCTGGCGTCGCCGTACGTGCAAGTGC
GGGGCCTTTTCGGCGGGCTGTGGCGCCTCGTTCCGGGCAGGAAACGATCTGAACGTTCTG
CTGCCTCCTGGGTTGAACTTGGTGCTAGTAGTCCTGAGATTCTCCACCATTCATCACACA
GTCAGACAACAGTATTAACATTCCTTATATTGCGGGAGGTGACTTTAACATCCGCAGAGC
ATCTCCAACAACGCGTTGCGTTAAAATTATTTTGTAGCGCCGAAATACCTTTTTTTAGCA
TGCAGCAACAGCCGCCGTAAAATGAGGCGTGCTGTTGCCGCTCCAGCAGGCTCAGCACAC
GCAAGAAGTCAGACGCGCGCGAGTAGCGAAACGCTATAAATATTTCAAACGTAAAATATT
TTTGCATTCGAGCAACATAGCATAGTTCAATTACATGACATAGTTCAAAATTATCGAACA
AAGATCATGACAAATATAAAGTTCACACACAAACAAATGATACATGGACAATCATGTCTC
ATCCTCTTCCTTCTCTGCTTCGTCCTCTTCTTCGTTTGAGGACGAAGACGATTCGTCGTT
CTCGTTATGAGCCATGCGTCCATCCATGAGATCATCTCCAACGATATTATGCGAAGCTAT
GTACGACATACCGAAAGCCATGCTGTCACGATCTGTATTTCTTTGTCACATTATGTTTTT
ATAAAATTTAGAGTCATTTAAAACTTTTTTGCATGTTTGTGATGTTTGATCTAGTTATTA
CTTGCTTGTGTGGTTGATTGTGTTTTTAATCACTAAAATTATTCTCCTCTCAAGAACTCA
TCTCCTTGACCCCAAATCTTTGCCCAATGATCATGTCATGTGTATAGGACCAGAAAATAT
TTTTATAAATTATTATTTTAACTAAAAGGCATTTATTTATTTTAAGCTTTCAAAAACCTT
TGAGTTGAGATTTGTACTACAAGTCCTCAATTTAGGAGTGCTTTACCCCAAAGGTTTTAT
TTGGATCCTATTATCAAAAATACTTGACGAAACCATAAAATAATTATTTTAAAGGTTATT
TTACTATTTTATTTAAATACTTATTTTTGAGGCCAGAAATGGTATTTCNNNNNNNNNNNN
NNNNNNNNNNNNNNAAAAATATTTGAGAAAATTTATGGAAGCTGAGTGAACATATATTTT
TCATATGTAAGAGTTTCAACACATGGTCGTGTTCAAAATATTGGGCAAAACCCCTCAAGA
CCCT
