Contig Data
morexGenes
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Map Locations of contig_37149 (4923 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37149

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51911 3 311 bp None Available Available None
MLOC_51912 1 552 bp AK368921 Not available Available None
MLOC_51913 1 1083 bp AK358001 Available Available None





CDS Structure of MLOC_51911






CDS Structure of MLOC_51912






CDS Structure of MLOC_51913






Contig Sequence (4923 bp)

>contig_37149 4923 assembly3_WGSMorex_rbca.fasta
GAGGCCGTGGCCGGCGGCGAAGAGGCGCGCCTTCCCCTCGGAGCGGCTGGCCACGGCGGC
CACGTCGGCGGCGGGGACGAGCAGCATTGAGCGCGCGACCTTGCGCGCGATGGAGCCGCA
GCCCATGATGCCCAGGCGCACCGGGCGCGGCTCCTCCGGTGCGGCGGCGGACGACATGGC
GAGCGGCGCGTCGGGGCCCGATCTGCACGCCGGCATTTGGAGCGAGGATCGACGCGATTT
GAGGAGCTTTTTGGGGTTGTTGAACGAGAAGGCACCGGCACAGTTAGCTGCGGCCAAAAC
CATCTCCATTGTTGAGCCGAATCAAAGACGGGCAGGCTCTAGATCCAATGCAAAAATTTA
TAGAGCCGGTTGAGCGGAGCCCCCCAAGTTTTAAATTAAAAAACCAAATCCTTCAGTATC
AGTACCAGCGCACTCTCGCTCGAAAGAGAATCCCGGCAGCTTCTCTCTCTTACCTACAAG
GCTCCAACTCGACTCTCCCGCCACCTACTCCATGGCTGAAACAGCAGGCTTGGGTTCGGT
TGTGCGGCTCCCCCGTCCCACGTCTGACAACAGGGAGGGGCGCTCCTCTGACAACAGAAT
AAACAATGAGGCCTTGTTTGATACCGGTGTATTTTAGAAATTAGTGAGGATTATTTCGGT
CAAACCCCTAAATTCACACATATCCCATGACACCATTTGATTCTAGTGTATTTGACATAT
TTCATCCTCACATTTCTTTATAAATCCTTAAATTCTAGTGCATTTTTTTTCAATACACAA
TACACCACCCCTACCTAGTGGATTGAGGATAAATGAGGATTTGAAGAGATTAGATGAAGG
TTGAGGTTTCATCCAATTCCTGTGAGGATTATCCCATCAATTTCCTTAAAAACCCTAGTA
ACAAACAAGGCCCGAGGGGTTTTCATTCAGAAAGAGATCCTTCTACTCACTCCTAGCAAA
GTTTAGGTGGCCTCTTCAGGTTTAGAAAAGAAAAATTGTAGCAATTCTAAAGAATTTTGT
AGAAAAAAATTCTTTGAAGCCCTTTCGTGGGTAGCATTTTCCCAGCTGTCTATCAATGCA
AGTAAATGCCACCAGATAAAGTGTACGTATACAAAATGGCACCAGACAAAAACTACTCGG
ATATTGTTACAACGAAGAACTGCCCAGATATACCCTCATTCTGTAGAATTTTGACCTTGG
TCTGGATTAAGAAAGATAGAGGACACACAACATTCCAGAACACAAACCAGATGGAAGTGA
AAAAGATCAATTTGAGGAGGGCTGCGATTATACCACAGAACACATGCAACCCTACTCAAC
CAACTCTGCCTCACGAACATATACCACCAGAGAACACAAGCAAGCAACATATACCACCCA
CTAACATCATACTGCTTATTATTCCTCAACAGAAAAGGTCCCAAGCAAATCAATCCTCGC
CACAGAATTCAAAAAAAAAAAAACTAAACATCAAACATTATTATCCCCATCAGATGAATT
AATACTGCATGATCTACGCAACCACACACCACATCACTTACACAAATCCTAGAGGAGACA
TAACAGCAGTAAGGGCCACAAAGTCGAGCTAATCATCTCTGGCTGGGCTCGACTGTGCGC
ACGTTCGCGCCCGTCATTCCTTCAAGTCTGTCCTTCATTATATCTACAAAGTGTCCCACC
ATCTCATGGAACTGCTTCAAACCAGAAAGCGGCAAGATTATCGACGAACGATCAGCTCCA
GCAACCTGCATCAAGCCGGATAATAATGGGATCTTACTCTGGTACGGGGGTAGAGTTATC
AGTGTCACGAGTGATAATAAAGAATATTATACCTCGGAAATCCTCAAATAATGACCCCTG
TTGTTGCTGCCCAGGTCAAAGAAAAACCTTTTTTGATCTGCCCTAATCACCTTAGACAGC
CCCATGCCACTAAATTCTTCAATAGGAGGCCCATCAACGTCTACCTCTGGTACAGATGCA
GATTGGCTGCCATGCCCAGCTATAAATCCAGCACCAACATCGTCAGAAAGGCCAGGAAGG
CGCTCTGGAGGTTCCAGGTGTTGCTGACAAATAAAATATCAGAAAAATTAATGCCGATGT
CATTGGAGCCCATAAATAAGCAAGAAACAGGTTAAATTTGTTATACCTGACTTGGATGAT
TTGGAAGAACGTAGAGTCGGGAAGCTTCGTCATTGATTTCTAACAGTACATTCCTAAATG
CTTCCCAACCTTCTTCGCCAGAGCTACCAGCCGGAACAATTATCGTGCTACGGTTTCTAT
TGACAGATGCCTCCGAAACCTGAAGAGAATTGTGTCAATAGGTGAATATTGTAATCATGT
CAAGGCAAACACATACACTACCACGTGTAATTAAGAAGCAAAGACAGCAAAGCATGTACT
GTAGAAGCAAAGATAAACAGTGGTTCACCCCGCCGATCCATGTGTTACAGTATATGTGGA
TTGCACTAGCCCTTTCCATTAGTTCGGACTTTTGGTTGCTGGATGATCATGTGTAATTAC
TAGTTTCTAACCACAGTATCCACTTTGAAACATATGTACAGGATATTCCCTCATCCACAA
GATGTTTGCTGGGACATGTGACGGAACTGAAACCTACTGCACTCTTGCTTGTGTTAAAGG
AAAATTTAATTTCACTGGAGAGGCCAAAATAACTAGGCTGCTAATACTCTATTAAAAATC
CTTTTGGCAGTTAAGACTTCAACATGCGCCAAAATAAATCATTATGAGAACAAAAAAAGA
TAGGAAGATGTTGGAATCATTTAGGAGAATGAATACAAAATTCTGGCAATTAACATAAAG
AAAAACAGAATATAACTAAAGCAAATATTCACAGGACGAGAGTTGTTCAAAGACATTTAG
GAAAAAGTTCAGGTAACTGAATAATGTCGAGGTCATATTTTTATTAACACAATAAGTCAA
TAAAGCGACATAAAATAATTTACTACTACCTCTGTAAACTAATACTTCCTCCGTCCCAAA
ATTCTNNNNTTAGATTTGTCTAGATATGAATGTATCTAGTCAAGTTTTAGTACTTTGATA
CATCCATTTCTAGACAAACTTAAGACAAGAATTGTGAGACAGAGGGAGTATAAGACGTTT
TAGAACAATATAATTTAGTGATCTAAAAAGTCTTACATTAGCTTGCAGAGGGAGTAGATA
ATATTATTAGTCATAAATTAGAGACTTTATATGAAGCACACATAAGACTATTAAATGCAC
TAAGGGCTTGTCTGATGTTAAGTACTCAATTTTCTGCGAGTATATTCCCTTTCCTCTTGC
TTTTAGTATCCTCTGTAGTTATATGATTTCAGGCTTTGGCAACCTTAAAATGGATTTGCA
GTATGAAACTATCAATGGATATCTTCGGTTGCTCAAACAAGTTGCCATTGAGGAACACAA
TTAAGACACAGCAAATACATTCAGGATACTAACTCGTAGTTTTCAGTAACATCACCAAAC
AAATCCAGAAGATTCCGATAAAGGGACAAACAACCAATTTCCTATTAAAATGACCTAGTA
CGGTATTATTAGAGACAAAGAGTCAGTAGCATGCCAAATTTTGTACTTTTCAAAACACTA
TTCAGTTTGAATATTCCTTCCATGGTTGTCTGAACATTGAGATTAATTTTTCTGTTCATC
TTTGGAACCACAAGTGCTCCACAACGGATAACTTTACAACAAAACCGAACACAAGTTCAA
CACTCAAGAAAGTACAATTCAATATCAAGACTATAATCTCATCGAGTACAGAAAAAACTG
AAGGGCATAGAAAGATGAGGGAAAATCAATATACTAGCCTCGAACAGAGTAGAAAGAAAC
ACAATTTCCAACATAACGCAGGCAATAGCCAGGTTATAAGTATAACCACAAAACCCAGAC
TATCTTGTATCCTCTTCCTTTTCCACATAAGATTCAAAGATCAATTCTATGAACAAGTTA
AGTGTCAATAATGGTCTGCACAGTAGAATATTGTCATGAACAGACAGCAGGGATGCTATT
TTTGCTTAGTTGGAACCAGCTTCATACTAAATAGATTGCAAGACAGCCAGTAAAGGTGAA
ACTGACAGATTAAGGGAAGCCAAAATCTGAGAAAACACAGCTACTAACTAAAGGGGAAGG
TTCCCTTTTGGTCCTCCAACCTTTGGGTTCAAAGCCCAAAGCAGCCTCTTAACTTGGAGT
CTGGTCAGAAAAGATCTCGTCTCTGACAAGTAGGTGTAGGTCCATGCTCCAGCATACAAC
TTGATAGACATCCTCTATCATTATTTAAATCAATATATGCCATTTTAGGAAACGGAAGCT
CAGACCTATGTAAAAGAACGAGTTGAGGTTTAATGGACCAGGAGAGGAAGACGAAAACGC
TACCTTTCCCTTACTAAATCGACACGCACCTATTTCCCGTTTTAGCTAAACAGTTGAGCT
TCTCAAGAATGGATTCCCCATATACCAATTGGGAAATTCTACCACACCAAATTTGACAAA
ACAAGAAATTCTGCAGGAACGTTACGTCACCTTAAGGTAACGGCCTCTCTTGTTCTCCCC
AATATCGAAGTAGAACACCTGCGAGAGCCAATGGGAAATTTAGCAGCGGGCGAGAGCGAA
ACCAGCGAGGGTTAAATAAATTAACCGTGGAGAGGGCGAGCGGACCTTGGTGTCGAGGCG
TAGCTCCTTGCTGAAGACATCGCGCTCGTCGGTGCGGATGTAATAGTCGAAGAGGTCGAG
GAACCAGGCGACGCCAGCGATGGGCACGATGATGGTGGAGCGCGTGGTGGACGTCTTCTC
GGAGATCTTGAGGTACCTCCCCCGCGGGTTCTCCTTCAGATCGAAGTAGAAGAGCTTGTG
CTCGAACTGCAGTGTTTTGCTGACAAGCTCGACGTCGCTCCCGCCGCCGCCGCCGCCGCC
GCC