Contig Data
morexGenes
Links



Map Locations of contig_37146 (2290 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37146

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51905 1 342 bp None Available Available None
MLOC_51904 1 1111 bp MLOC_51904.1 Available Available LOC_Os03g29770.1, FRAME:+3, EVALUE:2e-73, 13103.m03415 protein EF hand family protein, expressed





CDS Structure of MLOC_51905






CDS Structure of MLOC_51904






Contig Sequence (2290 bp)

>contig_37146 2290 assembly3_WGSMorex_rbca.fasta
TAAAGGTTTGGGCCTTTAGTCCCGATCCTTTAGTCCCGGTTCCAGAACCGGGGCTAATGG
GCTTGTGGAACCGGGACAAATGGACATTTTTCTAGTAGTGTTTCCGATCTTCATCGACAA
TGCCAGAGTGATGAGCGGCGACAAAGTGTGTCTTCAACACTTTTCGACGACGGCGATGGT
TGTTGTGTGGTCTAGGGATCTAAATACAAATTTCAGAATATTTTGGGTACTTTATACAAC
ATGTGAAACTTTTCGATAGATCATACAGTGAGACCTCATTTGAAGCCTATAGTTTTCATT
CCCATTGTTTGAACACCGAGCAATGGATAAGGCACTCCCTGCGTCGTGAGGGTGTGCGGG
GATCACATGGCAAGCCATTTGCGAGGCAAGAACAATTCAAGGCTGAGTAGTACATACTGA
CCAGTGACTACACTACACCTGCTCCTCACCACCACGTACACGAAGATGAAAAATATCCGA
AAGCATACGACCCCACGACCACATCAAGCAGATAAACATCGCTCCCAGAGGCCAAACTCA
GCAGCACAAAAACCCATCCATCCACCGCTGAACCCACAGCAAACCAAATCCGCTGCCGGA
AGTCTCCACTCCACTCTCCCCACTCCAGCAGCGACGACCGACCAGAGCCACCGAGAGAGC
GCGGCCAGCGGCCTTCGATCGACGAATAGATGAGCATGGTGGTCCTGGACGGGTCGACGG
TGCGGTCCTTCGTGGCGGACGAGGCGGCCTTCGCCCGCAGCGTGGACGCGCGCTTCGCGG
CGCTCGACGCCAACGGCGACGGCGTGCTCTCCCGCGCCGAGCTCCGCCGCGCGCTCGAGT
CCTTCCGCCTCCTCGACGGCGCGGGCTTCGGCTCCGCCGAGCCGGCCCCGCTCCCGGGGG
AGGTCGCGGCCCTGTACGACGCCGTCTTCGAGCAGTTCGACGCCGACCACAGCGGCGCCG
TCGACCGCGCCGAGTTCCGCGGCGAGATGCGCCGCATCATGCTCGCCGTCGCCGACGGCC
TCGGCTGCCAGCCGCTCCAGGTCGCCGTCGACGACGAGGGCGGCAGCTTCCTGCTCGAGG
CCGCGGAGCACGAGGCGGCCATGATCGCCGCCAGGGTCCAGGAAGACCGCGACAGGGCCG
CGGCCCAGGAGGCCGCCGACGGCAAGTGACGGTGCCACGTGCTGCTGGCGTGTAGATATA
CGTGTGAAGGTGTAGGCGTGCGTGGCGGGTGTACGTGTGAGGCGACGGGTGGTGTGCTGC
CGCGTGTGTATGTCTCTACTCCTCCGAGTGTGCCGAAATGGAATAAAATGGTTTTCTAAT
CTAAGGATAAATGACTCGTTTGTGATTCTCCTGACAAGATGCTATGAGAGCAAGTAGTAC
AATAGAGCTGACTATAAAGAATACAATAGTATATTTTTGCTTAGTTAGACGAGAGAGAAG
AGGAGAGAGAAGGTAAATGGGCTCTTAGTTAAGAGCCAACTCTAGCACATGCTCTATGCA
CTTTGTGAGAATGAAAGATGGGCCATATAATAAATAATTAGTACACTTTTCTAACCAATT
ATTGCACATGTTAGCTATAAGATAAGTTATTGATGATATGACATGAGCTTACAGCCGGCA
GCCGGCTCTACTATTGTCCTCGCTCTGAGGGCATGTACAATGAGGACAGCACTTGGTGCT
GCCTCAGTACATCCATGACAGCAAAGGAAAATGAGACTACCGTCCCTGACTCTAGCGACT
CATAAGGGAGCCAACATCTATGGAACCCAATGACGTATGCAAAGGAGGACGAGTGCTCGT
CTTTTTCTAAACAAGGAGAGGATGAGCAAAGTAATCGGTGGTCCGTTTCCTTGCTTTTTC
TTCTTTACACTGTTTTTGTCAGCGAGGAGATGGGCTCCTCTGCAGGAGTCCGCTTTGATT
GGCAAGCAGCAGGTTGATATGAGCTGGATTGTTCAAGCCAACGTGGTGGCCTGGGGCACC
TGTCCAGCGTGGCCCATTGGCCATGCCCTGAGTGGCGGACGCGGCTTGCGTGCGGCTGCT
ACGTGCGCCCATCCGTGCGACCCAGCCATCGCACGGCTGTGGCTCACGCACGCCCCGCTT
CAGAATTCCTGCGAAAAAATAAGACAAAATACACATCCTAATACAGATTCGTTTCTGTAA
TACACTCCTATCCACATCTCTTCCCTTCTGTCTGAACTGAAGATCGAGCTGAAGCTCAAT
CTCCATCGCCCCTCCGGCCGCCCATTCGTGCAGCAGGCCAGACGTACGTCGCCGCTCACA
AGCGTGGAGC