| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_37140
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_51897 |
3 |
2321 bp |
MLOC_51897.2 |
Available |
Available |
LOC_Os09g39930.1, FRAME:-3, EVALUE:4e-129, 13109.m04018 protein tyrosine protein kinase domain containing protein, putative, expressed |
| MLOC_51896 |
3 |
1508 bp |
MLOC_51896.2 |
Available |
Available |
LOC_Os08g06200.1, FRAME:+3, EVALUE:3e-148, 13108.m00621 protein stomatin-like protein 2, putative, expressed |
CDS Structure of MLOC_51897
CDS Structure of MLOC_51896
Contig Sequence (7762 bp)
>contig_37140 7762 assembly3_WGSMorex_rbca.fasta
CCCGATCCACCCCCATCCCTAGACCGATGGAGGACAGGGTTTTTTTTTAAAAAAACAAAA
CGTTTTATTCCATTTAATCAGGGACTGCGGGTTGATTCATCGAAAACGGAGGGACTTTTT
TCCAAAAATGCCATGACGGACAACCAGAAACCGTATTTGCTTTATTATTAATTAGGGAGA
GATAAATAAATAAGTAAATCTCCCGGGTGAAAAAAGAGAGGAAAAGTCCTCCTCCTCCTG
CTGGTGCATCTTTATTTCTTTCTTGCAAGGAAAGTATAAGTAGGTAATATAATAAGAAAA
GAGAAGAAAATCGGCATCCGTCGGATCTCCATCCATCCGTCCGTCAGTCCTTCACCTGAT
TTCTTTCTTTCTTTTATTTTCTTTTCGAAAGGAAAGGAAAGGAAAGGAAAGGAAAACGAT
CGTTCAGACCCCTCCCTCTTATATATAAATGGATAATATAAATCCCGAGCCAGCCTTCTC
GAATCGAATCAAATAATAAAATAAATTTCCTCTTCCTCTCGACTCGGATCGACTCGACTC
CGATGGCGATGTCGACGGCGACCCGGATGCTGGCGCGCCGCGCCGTCCCCGGCCACCTCC
TCCGCAACGCCAACCCCGCAGCCGCGACGGCGGCTCTGCTGCAACGGCGGTTGTACCGCG
GGGGAGCGGACCCTGCGCCGTCCTTGTACCACCCGCCGCCGACCCCGGCGAACCTGGGCC
TGAGCATCGTCCCGGAGAAGAAGGCGTTCGTGGTGGAGCGCTTCGGCAAGTACCTCAAGA
CGCTGCCGTCGGGGATCCACCTCCTCATGCCCGGCGTCGACCGCATCGCCTACGTCCACT
CGCTCAAGGAGGAGGCCATCCCAATCCCAGACAACTCGGCAATCACAAAGGACAACGTAT
CAATACAGATCGGAGGAGTGCTATACGTCAAGGTTTCCTTCTTCTCTTCGATTCTTCTTC
CTAATTGAATCTCGAATTGACGATGAATCGGAGCAGATCGTCGACCCCTACATGGCCTCG
TACGGCGTCGAGAACCCCATCTATGCTGTCATCCAGCTTGCCCAGACAACAATGAGGAGT
GAGCTTGGCAAGATCACCCTCGACAAGACCTTCGAGGAGAGGGACACGCTCAACTTAAAC
ATTGTGGTACTTTTGCATACCTAACCTACCTGCCTTTTGCATACTTGAAAAATCTGGATG
CTTATTACTAGGACATGACTTTGATTTATATCTCGACTATCATGCTTGGATTGGATTGGA
TTGCATTGCATTGCATTGGGTTGTGTGTGATTCATGTGCTCTCTTGTTTCCCCAACTACA
GAAGTCAATCAATGAGGCAGCTGAAACTTGGGGTTTGAAGTGTCTTCGCTACGAAATCAG
TATGCTTCTTTTCCTTCCTTCCTTCCTTCCTTTTTCAACTGTCTGTATGTATGGCACAAT
ATATCATCTACTTATCCAACCACCACACAACATCACATTACTAATATACAATCTGTCTAT
CTATCTTTCTAGGGGACATCACTCCTCCAGATGGAGTCAAGAAGGCCATGGAGATGCAGG
CCGCAGCAGAGCGCAAGAAACGTGCTCAGATCCTTGAGTCTGAAGGTAGCTTTTGCTAGC
AACTTTATTGAAGCCGCTCTTCTCAGTTTCTATGTCATGTCATGAACAATGAATCCTGCT
TGCTACCTACTGTACCTCTCATGTTGCTTCCCGACTGATTTTGCCAAGTATACAGTGGTT
GATTTCGTTAGATGTCAGTTTGTGTTTTTATGTTATAAGTTGCACACTGAATCCTGCTGC
CATACTAGTCCTAGTTGCACACTGATTCCATATACTAGTGCTAGATGTAAGCGGCAAATT
AATAAATCCTGCTACCATACTGATGTTGCAACTAGATAACTGTCAGATTTCATCAGACCA
AACTCCTATGGCAAGCTGCTCTTCAGTTTAATAAGCCATTCTGTTTTTATGTGATATAAC
TTCTACCTAACTGATGTTTACAAGTCCTCTGGTTCAGCGCATATTAGCTGACGGTTGCTT
TTTTTTAAATTTGATTGAAAAGTTTTAAGAACCTTCTATGATTTGTTTGAGATTAGTTGC
ACACTGAATCCTGCTACCTCATGTTGACAAGTGCTCTTGTTTAGCCCATGTGCGATATAT
AGGTTGTAAATTATATCCCTGCTACCTCATCTTGAAGTGCCCTGGTTTAGCCCATGTGCG
ATATATAAGTTGTAAAATATATCCTGTTACCTGACTGATGTTGCACATTAGTGTTAAATT
CTATCAGACCAAACTCTTATCACATAATAAGAAACTACAGATTTAACTCCAGGTTTTGAT
TTTTTCTCTTCTGTTAGGTGCTATGATGGAAAAAGCAAACAGAGCAAAGGGTACGTGGCA
TCTGTTTTATTTAGCCTGCTCCGCATATTCTGAAATATTTTTCCTGCTCGGCTTGTCAAA
ATACTACACTTCTTGCATACTTCTAGATAGATGCATGATTTGAGGAAATCCTGTTCCTCT
GCCTTCTGCTGTCCAGCTATCTGGCATTATAAATTCATCTGGAAACACGCTATCCTTCCA
TTAAGATTTGTCAAATATTTGGGATTCTTTTATTCCTATGTTCTTAGGATATATAAGTAA
AGGATAATACCGCCTCCTGGACTTGTTCTTAATATATATACTAGCATCTGCCTGCATGTA
TTTTTCCTCATCCACTTGAGGAGATTGAACCTGATGCATTTCTACACAAGGTTTAAATTA
TGTCTCACTTGTACAGAAGGTTCACTAAACACATGAGTTGTAGAGACATTCATCTAATGG
CAATGAATTTCAGAAAACATCAAGTATTTCTAGCCCCTGCATTTTAGAACAGATATTGAG
TTCTACTGTTTTTATTGTTTGACTATACATACTTGAAGAACTATTCTCATTATAGTGTCC
CAGTTCACAAAACCAAAGTCTTGTCGTTTCTACTATTATTATTACTTGCTTTAAACATAT
TGTGATTGGTGGTGAAGCGTTTGCTTGCCTCTTGGACTTGTGCTTATTTATTTATTTTGT
GGACACCAGGTGAAGCTGAAGCGATTCTTGCCAGGTCACAAGCCACTGCTGAAGGGATCA
GGATGGTCTCTGAGTCGTTTAAAACTGAAGGCAGCACAGAGGTATCACGTTTTTCATGCA
AAATCTTGATGGATTTCAAGTAAGAAAGATTTTGACGGTCCTTTTTTCCTTTTGCCTGAC
AAAACATACATTGCTTCTTGTAATTTGTGCAGGCTGCCAGCTTGAGGATTGCTGAACAGT
ACATCAGAGCATTCAGTGAACTGGCTAGAACTGTGAGTTGAATCTTAATGGTTACACGAT
TCTTGCGTTTGCTAGCTGATATGAAAACATCGTACTGATGCATGTGTGTTTTGCGAAAAC
TGTGCAGACGAACACGATGCTTCTCCCCAGCGACGCAGGCAATCCGGGGACAATGATTGC
TCAGGCCCTTCAGATATACAACCACACGTACAAGCAGAAACTGACGCTGGGAAGCCCCAG
CCCCAGCAAGCAGGCGGTGGCGGCAGAAGAGGCTGATTTGTCCCTTGGGATGCCATCCGT
GAGCGACCTCGGCACCTTTCCGCACCAGAAGTAAAGCAGTTTTTTTTTTTTTTACTGTTT
TGTTAGGGAGGAATGGATAGCTAGACTGGATAGATAGATTGCTAGGGAGGCAGTGCAACT
GGGTCACGAGTGAAGATTTGCTGATTAGGTAGGTCGGTCGGTTAGGAGCAGCTTGAGAGC
AAGCTTTTTGTGTGTCTATATGAATGGGTGGTGTTAGATGCAGAACCTTTGAATATGTTG
CATGAGATATTTGCGGTTTTGGTCTTTACCCTTTGTTGCAAATGCCTTAAGGTTTTTTTC
TCTCTGAAGTCTGAAGTTTTTGTTGCGTACGTTTTGGCATGAAAATGTAAATCTGATAAG
AAGCTGCGCGCAAGGTGAAATCTGCTGCCTAAATCTCTTGTTTGTTTTGCATATGATATG
ATGTTGCTTATTATTATTATTATTATTAAATCTTATCCCGCGGGCATGCACAAACCAGGT
ACTAGTTGTAGAAATAATCGATCAAATGACAAGAACGCACTTGCATATATACATGTTGCA
CAGATATGCATAACTAGCCAGTGGCATCATCCTTGGGTGGTGACTCTTGTTGATGGGAAG
GGGAAGGGGAAGGGGAAGGGGAAGGCTTGTCGACGCCGGTGAGGTAGTCGAGCGCGGTGA
CGACGTCGGCGATGGAGGGGCGCATGGTGGCATCCTCCTGCAGGCACATTGCGGAGATGG
CGAGCGCCTGGTAGAGCCCCTTGGTGGGGTAGGCGCCGCGGAGCAGCGGGTCTGCCATCT
CCCTGAAGCGCTTCTTGCTCTTAAACCGCGGCGCCGCCCACTGCACAAGGTTGTGCTCAT
CATGCGGCCTGGAAGTGTCGATGACCCTCCGGCCCGTGATGATCTCGAGGAAGACGACAC
CGAAGCTATAGACGTCGGACATGGTGGTGAGCTTCCCCGTGAGGGCATACTCAGGGGCGC
AGTAGCCGTATGTGCCCATAACTCTGGTGGAGACGTGGGTCTTGTCGCCGACGGGTCCGA
CCTTGGCGAGGCCAAAGTCGGAGAGATGGGCGCGGAAGCAGGTGTCGAGGAGGATGTTGG
AGGCCTTGAAGTCGCGGTAGATGACGGGCGGGCCTGGGCGGCGGGAGGCGTCGTGGAGGT
ACTCGAGACCCCGGGCAGCGCCCTGCGCGATGCGCATGCGCGTGGCCCAGTCGAGCCCCG
GGGAGGAGGGCGGGAGGTCCAGGAGGTGGTCCTCGAGGGAGCCTTGTGGCATGAACTCAT
AGACGAGCATGCGGTGGTCGGCGTCGGCGCAGTAGCCGATGAGGGTGACGAGGTGGGGGT
GCTTGAGGAGGCTGAGCATGAGCACCTCCACCAGGAACTCGCGCGTGCCCTGCAGCCCGT
TGCGGTCCAGTTGCTTCACCGCCACCTCCGTCCCCTTCCCCTTCCCCTTTCCGTCCCCGT
CCCGCAGCCGCCCACGGTACACCGGCCCGAACCCGCCCTCGCCCAGCATCGAGTCCACCC
GGAACCCGCCGCTGGCCTCCGACAGCTCCGCGTACGTGAATGATCGCGCGGTCACCGTCT
CCTCCTTGTTCATCCCCAGGATCTCGTCAGCCACCCGCCGGTTGTGCTGGTACGTCACTG
CAAATTACATTGCAAATCTCATTTCATTCATCCATTCATTCTAGTCTCGCATTATATATG
TGCCTTCAACTTTAATCATCTGTCATCATTTTGTAAACCTATTATATATCCACTAATTTT
TGCTTATACAAGGTCATCTTGTATTTCAAATCTTTGACCATCAATTTTACCAACAGGGGA
TAGATGAGAAAAATACTACGTACTAGTATATAATTGCAGATTCCATTGGCCTGACCCAGG
AAAGCTAGACAAAAAACAGGAGGTGATCTTTTGTATATATTAGAAAACAAGAAAATGCCT
TGTGTGATGGTGATTTTGTGTCACATTATTACATATCTTATAAAAGAAAACAAAACGTAA
TAGTAATATCATGGATGTATGGATAGATTTTTCTATGTAACTCGAACGGAGGGAGGGATA
CCTGATTCTGCAACGATCTCATTGACGAGGGTGGCAAGGTTATTGTTGTTGGTGGTGGCG
GCGGTGCCGGCGCCGTCCTCTTCACGATGATCATCATCTCGTCGCAACAGATTAGGAGGA
CGGACGGTGACGGTGGGAGCATCTCGAGGAGGTGGCTTCTTTGTTGAAGCAACAGCCGCC
GGAGCACCGCCACGGCCACCACCATGATCCTGATCCGGGAGCTTGTCGGCGCCGGACTGG
AAGCAACACAAGATGCCCATCCTTGATTCCTTGCTTGCTTGCTAGGTGGTGAATGCTTGA
GCAAATTCTCTTCTACTACCTAACGATACATAGAAAGAATTTGCCCAAGCATTCAATCCA
ATCCAATCCGATTCTTGGATCCGATCCCAATCGACACGATCGACGAGCATGGTCATTGGC
CGGCCCGCCGGAATCCATGCCACCCCCACGCCAAACAAAGGTAGGGTGGGTTCATGGTTT
GCCCTGCTGGCTGGCCTAGCACCAACTGCATGCTTACCCCTCCCCTCCCCTCCTCTCCTC
TCCTAATTTTGGACACCACATTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCAAGA
TAAGATGCACATGGGATATGATTCATCTCCAGTTAGTTCACTACTAGTAGGAGGGGGTAG
ATGATTTACTTACGCCCACACCAGTGAGTCAAGTGATGCTCAATTCAATTATTATTGCCA
CCTCCATCAAAACCAAATTTCTATATCCGTTCCTTTTGTCGCAACAACAAGAAAAGAAAA
GAAAAGAAAGGCTCGACTCTCAACTGATTTTCCCACCACCAGCAGTACTACTAGTCTTAC
ACTCGTTGTCGTCGTCATGAGCAGCGCTGGTCATCAGGTCGAGGTTCATCACGAGTGGTT
GCCGCTGATGGCCGTCATCATCTGAAGGTAGTGCTTGCAGTTCCAGGCGAGCATCCATGG
CCAGTATCTCCCAGTCGTGGTGGCGCAGAAACGAAAGCACGCCATCCTCTTTTATTATGC
ACAAGCACAAGACAGCACAAGATAAATCAGACATGAGCCATACATATCAAGGGAGTCTGA
AACAAGAACAAAAAAAAGGAGAGGTGAGTAACCTCCATTCCGGATGGCCTCGATGTGAAA
GACTCCCGACCCCCGTGGGCCGGTCACCGGGAACGTGCACGACACGGATCGGCGGCGATG
ACCCAGAACGACGGACGCATCGTACCATGGCCCTCTAGCTATAGGCAGCCCAATGGCTTG
TACGACCTCTGGGTTGTCGGTAGCCTTGTCGAGCGCCTTCCTGGATGGTTGTAGTTGTAC
GTATGAGCATCATCATCATCATCATGATAGAAAAGATGAAAGATTTAATAAGAGATGTAT
ATGCTTTTTGTTGGTGCATATTTATTTGATTTCCCTAACTGAAAAACCTGCATACTAGAG
ATACAGTAGAGCAGAGTAGAGTAGAGTAGAGAAGAGGCATGATAAAATGTTGAATCTAGT
ACAGTATGTATCTAGCTAGCTAGCTAGCTAGCAGTTGTATATACGTATAATATATGGAAA
GAAAGAAAGAAAGAAAGAAAGTATAATTGATTGAATCTAGACTAGAGAGGAGATGCAGAT
GCAGTAGAAGAGAGGTTAGTAGAAGAGAGAGACGTGGTGCATCCGTGGAAGATTGCGAGG
TCGTTGATGGCACTGAGGGCGACTCCCCCGGCCAGGCTCAGGGCACCGATGGTCACCACC
CTCTTCCTCCGGATCTGACTCTTGCTCTCTCCGGCGGCACCCGCAGAGGAGGAGCTGAAA
CCCAAGCAAACAAGATGAGTGCGGTGCGGGGAGCAGAGGAATCTTAGAGAGGAGATGGGT
TGCTGCTTTGCTTACCGACCGGATCCTTTTGATGGACGGACGCCGGCGAGCCGCCCTAGG
AGCTTGCTCGTCCTCGTCCACGCCGCCGGCCACATTTCTTCCCCCTTGTCACTTTTTTTT
CCCTTTCATGCGAGCTGCGATTGATAACTTAACTGAGAACTGGGTCTGGGCTTCACTGAC
CAGCTCGGGCCTTTATCCAGTGGGCCCGAGGGAAAGGCAGGCCCAACGAAGCTATTTCAT
CTTCTCCAACAAGGCCTATCCA
