Contig Data
morexGenes
Links



Map Locations of contig_37106 (5048 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37106

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51838 1 1230 bp MLOC_51838.1 Available Available None
MLOC_51837 1 1459 bp MLOC_51837.1 Available Available LOC_Os06g36990.1, FRAME:+3, EVALUE:9e-137, 13106.m03828 protein phospholipid-transporting ATPase 4, putative, expressed





CDS Structure of MLOC_51838






CDS Structure of MLOC_51837






Contig Sequence (5048 bp)

>contig_37106 5048 assembly3_WGSMorex_rbca.fasta
TTTTTTTTTGTGTTTTTTTTTTTTAAGTCGGAGAGTGTTTTCTTTTTATCCCGTTGCAAC
GCACGGGCTCTTTTGCTAGTATTCAATAACATGAATTCACAGCTCTATGAATATCTACTT
CAGGTATTTATGGATGAGTGATCCTAATGAAAGGGACACGTCATTCTATGTACTTCCAGT
TAAATTTCTGTATGTGTTGGCCCTTTGTGCCATAGGACTTCATCTGTATATCCATCAACT
GATATGGCATAATTTTCACTTTGCAGTTCCCAGCGTTATATCAGCAAGGACCAAATAACC
TTTTCTTTGACTGGTACCGGATTTTAGGATGGATGGCGAATGGCCTCTACTCATCTCTGG
CGATATTCTTCCTCAACATCTGTATATTCTATGATCAAGCAATCCGCTCTGGTGGACAGA
CTGCCGACATGGCTTCAGTGGGAACCACCATGTTTTCCTGCATCATCTGGGCTGTCAATA
TACAGATTGCTCTGACAATGAGCCATTTCACCTGGATTCAACATCTGTTTGTTTGGGGCA
GCATAGGGACTTGGTATGTTTTCATTATCACATACGGGATGGCTTTGAAGTCCCGAGACA
ACTTCCAGATTATGACAGAAGTTCTCGGGCCAGCTCCCATATACTGGGCAGCAACCCTTC
TGGTGACTGCTGCTTGCAACATCCCCTACCTGATTCACATATCCTACCAGAGATCGTGCA
ATCCACTTGATCACCATGTGATTCAGGAGATCAAGTACCTACGGAAAGACGTCGAAGACG
AAACAATGTGGAAGAGGGAACGGTCCAAGGCGAGACAGAGGACCAAGATTGGTTTCACCG
CAAGGGTAGACGCAAAGATTAAGCAGATCAAGGGGAGGTTGCATAAGAAAAGCCCATCGT
TAACCATCCATACTGTAGCATAGAACATCTCTCGAGTCATCTGGTAGTCTCGTCGACAGT
AGTTGTCGCCTTACTTGCTCCTGCAAGGCAGCGGTTTTTGGCTTCACCGAGTGATCAGGC
GATTTTTTCTCTTTGTCCAGCCTAATTTTTTCTTTCAATTTGTTGCTGTTCTTTTTTCTT
GTCCATTTGTGTAAGAAATGTTGGGTTGTAATTGGTGGCCTTACCCCCCAAGTAGAAGTT
CTGAAGCCAGCCGTGTAAAAAGTATAGCTCCTTTCAGTGGGAAGAGACAAACCTACCGAG
ATAGCTGACAGTATACGTATATCTGCAATTTTGACTATCCTTGTGACTTTGTTATCTGCA
ATGCTGGTAGTAGTAGCGTTGCCCCTGCGTAGTCAACATAACCGAGCATTGTATTCTTTT
TTTTTTGTTGCTGAGCAGTGTTTTCTTGGTTGTTCATAGTATTGGACTTTCCAGTACGAC
AGTGTCAGTGAACATTCATACAATGAGCAGCATAATTTGGAATAGGCCAGTCTTCTCTCT
TCCACATTGAGTTGCTGATGCAGTTTTGCTTGCATTGCTAATGAACCATTTACGTTATCT
ATCCATGATTTTGGTCAGTGATAACATATTCAGTGGCTACAGTATATGTCTATTCATTAC
ACACGGTGCATAACAAGTTATTCTTCACCCAAGGAAATCTTACAAGTGTTTCATAAATAA
ATTAAATTTGAAATACAAATAGTTACATTTATATTGATTCACTATGTAAAATTTAACATA
AAAAAACAAAAATATAGGTGATAATACCAATTTTTTTTATATTTTATGTATATTTTATAC
TATATTTTTATGTTTGTAAATTTATGTGACATAAAATATTTTTAAGGTGATTTTATATTT
TCTTACTGTCTCTTTTTACGTATGAAATAAGACAAAATTTATAAAACGTAAAATTACATT
GCATTGATGTTAAAATAAAGGGGGTGAAGAATAATTATCCTCGTCTAAGATGATGAATAG
CGTGCCCGTAGAGTGGGTCTATTGTAACATTATCCCTTAAAACTCCATTCTAACACCGAT
CTCTTGTTCTGACATCGTCGCATCCGATCCAACTCGCTTCAAAATCGAAATATCTCAGAT
TAATTATTATTTTTTATTAAATTTATTTTAATTTAAACTAATACTACCTCCTCCGTTCTT
AAATATAAGTCTTTGTAGAGATTTTACTAGCGGACTACATACGAATGTATATAGACATAT
TTTAGAGTATACATTCAATTATTTTGCTTCGTATGTAGACATATAGTGAAATAGCTTAAA
AGATTTATATTTAAAAACGGAGGGAGTATTATATTATGTGAACTTATGCGGGATGCCCGC
ATACATCCCTAGCCGGAGCCCTCTGGAGCTGCAAAATCAAAACCACCTTCTTCCCCACCC
TACCCCACCCCACCAAAACCACCTTCTTCCCCTTCCTCTCTCCAGCCCGACCTCCCCATC
TTCTTCCCCTTCCTCTCTCCAGCCCCACCGCCACACCCCACCACCACTACATCCGGCACG
GCCCGATCTCACCTTCCCCACCTACATCCCGCGGCATTCCTCACCTGTCCTTCCCCCTCG
CTGGCCATGGCGCACCTCCCCTCTCCTTCCCGGCGACAGGCCACGCGGCACAGCTCCCGC
ACCAAACCCAACCTGCCCGTCCCCGACCACCCTCCGGATCGAGCCGCCACTGGAACCCAG
AGTCCACCGGCTCCTCCCCGTGCTAGATCCGGCCACCCTGTGGTCGTGGCCTCAACATCA
ACCTCCAGTGGCCCCGCCCCGCGCTGGGACAGCCACGTTCGCCCATCATCGGATCCCGTC
GACGCCCCCACCATCGGGTCCGGTTGCCATGGGCACAGGCACGGCCTAGCGTTGGATCCG
CCCGCCCCGCGACCTTCCACCATGGCAATGCCGTCGGGGCCCGGGTCTTCCTCTCCCTAT
CCAGTAAGGCGGCCCCATCGAGCAACTCCCCCTGCGTCAGGGGCTCTGCCATCGCCGGAT
CCCGACATCCCCACCCTGCTGCATGGACGATGACATCCCCGGCCCCTCCCCCAGCCATTT
GGAAGAGGGTGGTCGTCCGAGTCTGTCAACTCGCTGCAGTCAGCGCGATGGACATCCAGA
GCTCGTCGTTGACACTAGGTGGTGACAGCGGCAATACAGCTCACACACTCATAGTTTGCG
GTCCCAAGTGAGCACCTTCGCGCGAACAGCCGACGGTGGCATCGCCTTGAGTTGAGTCTC
ATGTTGTCTGCATGCAGTGTGCTTGTTCGTGTGTGTGCAGCTCCTTCCCACCTAACGAGC
AGTTCCAACAGTGTTTTTGCATTTTTTTTTGTAGATAAATCAAAGTGCAAATTGCAGTCC
GGTAGCGGGACGTGTGCAGTAATCGGCTGACCAGCGCAATGTCCTTTAGTCTATCTGTGA
GCATTCGATCTGATGTGGTTCGTTGTATAGAGCTATGTGGTTCACTCTGCTAACAAAAGA
AAACCTCACGAGTTCGCGCGTGTGTGCAGCTCCTTCCGACCTAACGAGCAGCTCCTTCCC
ACCTAACGAGCAGCTCCTTCCCACCTAACGAGCAGCTCCTTCCCACTCTGCTAAAAAAAT
TGAGGTCATTTGTGGTTCGCTTTGTAAAAACAAAGAGCAAAGGAAATTCTACTAGAGGTT
CACTTCTTTTTATAATGCACTTCGTTTTTGTGTGTTTCAGAATCGAGTCGACTGCAATGC
TCTTTGTCTTGGGATGTGGTTCACTTTTGAGAGTAAATACGTTCACTTACATCCAACGTT
AGAGAAAACAACAACAAAATTAATGTGGTTCACTTTTAAAAAGTGTTGTGGTTCACTTGC
CCTTGTCTCCGCGTTCCATTCTCGTTCATAAAAGTTAGAAAAAAAAGACAAAACTAAAAT
AAATAATGAAGTTCACTTTCCCATATAATACAATGCGGGTTTTCGTCTGAAGTAGCGCAC
TTTTCTATCTCATGCGGTTCACGTGTCAATTTTGGTGTCGCGAAAAATAGAGTATGTACA
TTCGGTATTTTCAAAAGTACACTTAAACCGTAAGAAATTGAAGAGAGTGATCTACATGAA
AATGTTGCGTCTCGTCGATATATTTCCAACGCCGTATCATTTGCATCATGCCGACGAGCG
GTTTGGAAAAGTTCACGAAAATACGTTCGTTGTCATTCGTAGGCAGCGACACCGTTTTCA
AAATTCTTTTAAAACCGTAAGGAATCTCAACAAATGATCAACATATGAAAGTTGCGCCTG
TTCCATAGCTTTTCCACGCTGTATCACACGCCTCGTTCCGACGAACGGTTAAAAAACTGC
AGCAAAAACAATATAAAAAAACAAAATTTTGCATTTCGGTAAATTTGAAACTGCTCTTAA
ACCGTAAGGAATTAAAGAGTATAATCTACATGAATAAGTTACGCCTCGATGATATCTTTC
TAACGTCATATTCTTTGCTTCATTCCGACCAGTGGTTTGAAAAAAAAACGCGAAAATACG
CTTACTACAGTCCATCACGCGCCCACCGTTTTTGAAACTGCTCTTAAACCGTGAGGAATA
TCTAAAAGTGTTCAACATGGTGAAGTTGTGATTTTTCATAGCTATCGAATGGTACATTAT
ACGCCTCATTCCAACAAACTGTTTAGAAACTAGAGCAGAAACGGTGTCGAAACAATGCAT
GCAGTTTTTTCTGTTCACATTACAGTGCTCGTTTGATAGGGGTGTTGTGCACTTGCGTTA
ACCGTGCAGTGCGGAAGTGGTGTCCGAATAGTTATTCTGCATCGAGTGTATTCGTCACCC
TGGGTGAAGAATAACTAGTTATTCTTCACCCCCTCTATTTTCACATTAATACACCGTAAT
TTTACGTTTCTTAAATTTTAATCTTATCTCATATGTAAAAAAAGACCGTAAAAAAAACAT
AGTCACCGTAAAAAATATTTATGTCACGTAAAATTACAAACATAAAAACATAATGGAGAT
TATACATAAAATGCGATTTTTCTGGTCTTATGATCTATATTTTTGTTTTCTTNNNNNNNN
NNNNNNNTAGTTAATCAATATAAATGTATCTATTTGCATTTTAAATTTAATTTATTTATG
AAATGGTC