morexGenes - Barley RNA-seq Database

Contig contig_37062

Source Contig contig_37062

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_37062 (2606 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_37062

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_51764	1	662 bp	MLOC_51764.1	Available	Available	None

CDS Structure of MLOC_51764

Contig Sequence (2606 bp)

>contig_37062 2606 assembly3_WGSMorex_rbca.fasta
TTTTATAAATTAAGAGCGTGTGCCGTGTGATATTTCTTTCTCCCGTTGCAACGCATGAGC
CCTTTTGCTAGTACATATAATAAGATATAACTGGGTTTCAACGCGTGCTCTCCTTACGGA
TACGTCAACTCTCTGTAAATACTGTATGTTCTCTTTCTTTTCTTGCGGGGTTACTTTGTG
TTCTCTTCTTTGTTGATAAAAATGAAGTGTTCATGTCGGTTACTCAAAATAAAAATTTAA
AATGTAGTTATGTATGTTGCTCTTTTTTGCCGTAAAAAGTTATGTATGTTTTTTTTTAAA
TGAGATGGGTCGCCCCCTGCCGCAACTTTATTTCAAAGCCAAGGAAAAAAGCATAACCAA
GTCTAAGGAGTTCTCGGCAACAGCCAAAAGTAACTATCACAGAAATAAAAAGCAGCGAAC
ATTACAAGTTTGCTCAAGGGGATTACAAGTTTTCTATAGCACATCAAGCCCCCCCCCCCC
CCCCCCCCTCCAGCAAACTAGACTACCAGACAATTCTAAGCACCTCCCCTCTCCGGCGAT
CCAGCAGCCTGATACACCGGAGAAGAAGAGTACCCTGGGCCTCTGAACATAATATTTTCC
ATTGCTTGACCATAGCCCTCACCAAATCCAGCACACAATGAATACTGCGCCACTTCCATT
GCATAAAAACAGTCGATACAGGGAACAAAAGCACCTGAATATGGGCATATGGCTTGATGT
CGATTTGTTGGTGTAGCTTTCCAGATCTGCATGGCTTCAACACTTATTCCCCGTGCCGTC
TTCTCATCCCTGGATCCAATTAATCTTTTAAGAACAGGTCAACGGAAGAGTAGGAACAAG
GAAGACAAGAATTAGGGATGTCACATGGAGCAATCAGACGCGGAGCGCATGACTATTTGA
CAGCGAATCAAAAGAGTAGTACTCAATTAGGGTATAAAGGAGGTAGACGAACCATCTCTA
ATGCGGTGATGCCTAAAAAATCTAGTTGATGGGGAACATTGAGGATGCAAAGAGAGATGA
TTGGGGAAGGGAATAGCACCTTTGGTCTCCATTAATGGATGATGCACAGAGCGGCTCCTC
GAATTTGGAAGTGCACTTGAGCGCGGCACTGTTCTTTGGCATAGGAGAATTTTGGGGAGG
AGACGAGGAGGCTGGAGACGTTATTGGAGGAGACCGATGGCGTGCTCCATCAGCGTAGTT
TATTTTTTTAGGTAATACAGCAACATAGTTAACTAGCAATTGATTTTTTTGGTCCGTCGG
TGCTAACTAGGTAGTATCTTGGGCCTTGTTTTTTTCCTCTTATTTTCTAAATCTAAGTCA
GAAATATCGCAAAACGTATACTGTGCTACTTTCTGGGCTGGGACCCCTACCTCCCAGGGG
CCCAGGGCGGGCGACCCGTTGCCCCGGCCTATGGGCGGGCTGTGGTTCATTTTCAGGGGC
ACCTAGCTAGTTCAGTTTCGAGAAGATAGCTTTGATAAAGCCATGAATGAATACTACTCC
TTTTGTTTCGAAATAAATGTCTCGATTTTATACTAGCTCTAGTATAAAATTATACTAAGC
TTGAGACACTTATTTTGGGACGGATGAAGTATAAAAGCAGCATATGTTTTTTTTTTCCGG
TAAAAAGTAGCATATGTTGGTAGATCAGCTAGCACATAACTCATCTTGCTTTATTAGGAA
CCAAACAGAAGCACCTTTTTTTTATTCCTTGATCTTGCCACTTCCTCATCACACTTTAAG
TGATGCTGAAAAAGGAGAAAGAATGTTAATTTTGCCACTTGTTGTTCGACTGTACTCCCT
CTTTTCCTAAGGAAATACTTGTTGAAAAGAAGGTCGGCGTGCCATCTGCTTCATGGTGCT
CTGCACAGACAGAGACAGAGACGGTGCCGCCAGCCGCCGTTTTCTGGTAGGTAGGCAGGC
AGGACGTTGGCATGGACGCCTCTCTCCTTGTCCGCGTGTGTGTCGCCTTCCTCACTCACG
TCCATGGCCAGCAGCTCTGCTTCATGGGGTGGTGCTCAACCAGAAAACGGTGCCATTTCA
GCTGTGTTCTCTTGTGCTCCGTGCCTCTGTCTTGTCTGCGCACGCCACGCCACGCTCCAG
TCCTGCAAAGACAAACCGGCATGGCGCCACTCGTGCACTTGAGACCCTTTCTGATGAACC
TATGCGCTTTTGTTCATCACATCACTTGTCTGATGGTATGCCAACTGACAGACAGGGATC
GTAATAAGATGCCACACTGAAATCAGCTTGTTCAGGCCAACAAACAAGCTGCCAAATGGA
TCAACTCAATCAAACAAGGAGATGTGCGCAGCAGCAACAAGAGAAAGAGGAAAAATTCCC
CTTGCAATCACATGGATGAACACAAGAACAGAGTATAGGAATCGAGTTAATCAGCATCAT
CGATCGGGGGTGTTGGATCCAATCGTCAAACCCGGAACGCATATATGTATCTATGCATGT
ATGTATATGCACATCTCTATAATTAAAATTGAATCTTTGTTTTTTTGCTTTGGTTTGGTT
TGTAGCAGCAGTCACCTCCTCATCTCATGTCATCTCATCTCATTGAGATGCCAATGCCAG
ATGCCGATGCCGGCCTACCTATATGT