morexGenes - Barley RNA-seq Database

Contig contig_37036
Source Contig contig_37036
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_37036 (8551 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_37036

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_51714	4	1206 bp	MLOC_51714.3	Available	Available	None
MLOC_51713	4	3534 bp	MLOC_51713.1	Available	Available	LOC_Os03g63480.1, FRAME:+2, EVALUE:1e-147, 13103.m07037 protein ankyrin repeat domain containing protein, expressed
MLOC_51712	1	2251 bp	AK356315	Available	Available	None
CDS Structure of MLOC_51714

CDS Structure of MLOC_51713

CDS Structure of MLOC_51712

Contig Sequence (8551 bp)

>contig_37036 8551 assembly3_WGSMorex_rbca.fasta
CTAAAATGGCGGTTTACCGCGCGCGCGCCCCCTTTTCGTGCGTCTGTTGGAGATGCTCTA
ACTACAAGGGTTCCCTAGACATGAGGTATGGCGACATTCAACTACAATGACCAAATGAAT
AATCTGCAGATGATGAAGTGTAGTGAAGTAAAATAAATAAATAACAGTAACTAGAGAACA
TTGATATCCAATGCAGCAAGGGGAAAGTAAATTGAGATATAGATAAAAGTAATAGATGAC
CTAAATGCAATCAAAGAAAGGGTGATCCTAGATATGGATAAAAGAAAGGATGATCAATGC
GGAAAGATGACTATGAACTGGTAATATTTTGTTGTAGCAATATGAAATTAGCAAGCTTCT
GATTTTTATTTTATGTATTTCCTACTTATGCATTGCCTTCTGTGATAGCAGTAGTTTCGC
AAAAGCTGACACTATGGTGTTCATCACTTGAAACGTTGACACTATTTCCTACTTATGCAT
TGCCTTCTGCAATAGCAGTATTTCGCAAAAGTTTGACACTATGGTGTTCATTGGCACTTG
AAAAGTTGACACTATTTCCTACTTATGCATTGCCTTCTGCAATAGCAGTATTTTCGCAAA
AGTTGACACTATGGTGTTCATTGGCACTTGAAAAGTTGACACTATTTCCTACTTATGCAT
TGCCTTCTGCAATAGCAGTATTTTCGCAAAAGTTGACACTGGTGTTCATCACTTGAAACG
TTGCACGGGAAACCGGTGTGTGTAACCTACGATACTATGGAGAATTAATTCATATGGTGC
TGGAGCTGCATGTTTTTTTCGTTTTACTTTAAGCATGTTTTCAATTATAATATTTGTACT
TGCAGACCATCTATCTCCTTGCTTAGCACTACAAATTGCTTCTCTTCAAAGCAAAGATGG
CCTGAGGATGTAGCTTGGCATCCGGATGGTGACACAATTTTTGCTGTATATACTGCTGAT
GGTGGTGACACACAGGTTTCAATGATGAATCTTAACACATCAGGACAAGTAAGAACTCTG
TTTAAACTTTAAACCTTGAAGTAGCACAGCATATTCCATCTATTATCATCCATTACTGGG
TTTTGTAGTTGTTATAAAACAACACTGTTACAGTGAACTGGATTGGTTTCATAGGAAGTT
CAGATACAGCAAATCTCATTTTAGGTAGAAACACTTGCATATGAAGGAGCGTTTTCATAC
CAAAATTTTGCCCTCTGCATGGTTTTGACTCACAATATTTTGTTATTTTAAATTAAATCA
GGTAAGGTAGGAATTGGTAGGTGCCCTTAAGTTATTCCTGTTTTCATATCCACCAAATAC
CTTGAGTTTCTACTTCTCCTTTGTGCCTGGTGCAATAATAGTACCTGATTTATCCACAGA
TAAATCGAATTCACAACCATGGCTATCAAATTAGGTCTTATCAAACGACCAACTAAAATA
GTTCTGTTAGTGTGATTATGTTATCTATGGATGCATCAATGACCCAATGTGATCTGTAGT
TATGTTATGTAAAATCTTGCAAGAACCCACGCTTTTATGTTGTTTCTTTTTGATAAGTAA
CAGATGGTTTACTTTCGACATTAAAATATTCTTTCCCTTTAAACAGAAGAAAGTTACTTA
CCTGCAAGCGAAGCCTCATACTAAGGGAATCATAAACAACATAAATTTCATGCCCTGGTC
TGATACATGCTTTATGACCGGTGGAAGTGACCATGCTGTCATGCTCTGGCAAGAGAAAGA
TGATTCATGGAACTTCAAGAAAGTGCACAGGGATCAGCATTCTTCTGGTGTCATGGGTGT
TGTCGGATTGCAACAGAGAAAAACAATAATATCAGTCGGACTTGACAAGAGGATAATATC
ATATGATGTTGCAACTGAAAGGACAGAGTACAAGAACCTAATTGATAGCAAATGCTTGAG
CGTATTACTTAATCCAAGCGATTTCAACCTATACATGGTACAAACAGGGTAAGTGGACTT
GTAATGTTGCTTCTGATTTTTGGGTTCCGTTTCACACCTAAACCTCATTGGCATAAAATC
CTTCATATGTTTGTGTACAAAACAAATGTCCTTGTATGTTTCTCATTTGCAGTCCTGGGT
GCAATCGTTTCCATCCGTGCCTTTTGGGAGTCGGTGCTGCAAGCTAAACCTGTTTTGTTT
CTAACAACAGGTCGCCAGGCAGGCAGCTTCGCTTATTTGACATCAGGCTTAGGCAGACCG
AGGTTCACGCGATCGGTTGGAAGCAAACGAGCAGCGAGTCCCAGTCAGCCCTTGTAAACC
AGTCATGGTCTCCCGACGGCTGGTACCTGTCCTCTGGGTCAGCAGACCCTGTGATCCATA
TCTTCGACATAAGGTACCAGGGCCAGAAGCCCTGCCAGTCAGTGCAGGCGCACCAGAAGC
GGGTCTTTAAGGCCATTTGGCACCAGACCTTCCCAGTTTTGACCTCCATCTCGTCGGACC
TCAACATCGCGATCCACAAATACTGATGGAAACAGCCACCTGTGGATTCTTGGCCTGGCG
GATCATCACCATTTTTGTTGCGAGCTCGCGAAAGACGGCGCGTCAATGCCCTAGGAAATT
TCTTGGTCCACGGGAATGGGATGCATCAGTGGAGCTCCAGACGAGAGGCCCCAACGACAT
CTGCACTTTTTGATGCATCCGCAGGCCTCCCTGGTCGAATGTTTTGCCCGTTGCTGCCTG
TGGAGAAGTAGTACGTGCGTCGAAAACTGTTCCGGAACCATTTCCTTTCCTCTCCTTAGC
ATTTTATTTTTGTTTGTTGGCAATGTAAGTCTTGGTTCAGTTGGTACTGTGCGTTGCAAT
TTACAAGTGTCTGGAGATGTGATGTCCAAAGTGACAGTCTCAGTTGAAAGAAACGTGTCC
ACCTGCTGTCAGCCCAAAAACTTGTGTGGTCTGAATCTCATACTCTATCAGTGGTTAGTG
AGTTAGTTGTCCAGCAGAACTTGACAGGTGGCGTGCTGCATTATTTGAGTTTTTTTTTAT
CGTTTGTATGTTTTTCAACTATATATGGACACGTAGACGTGTATCACGGTGGCTCCAGAT
GTGCCAACCTGTTTGCTGAATAAACAGGCACGTTGCCTTCTGTTTGTCTGACGTGGCACG
TTGGCCGTCTCTTCTGGCTTGCATTTGTTCCATCAAGCTCATATAGGATCCCAGTATGTA
AATTCTGAAATATAATTGCCAGAGCAGAAAATATACCCTGCTAAGCTCATCTAGACCAAC
TACATTTATTTTGGGACAAGCTCATCTAGACCAACGACATTTATTTTGGGACGGAGGGAG
TAATAGTTTCATGGAGGACCCCGTTGTAAGTAGTGATCTAAAGGATCTTATATTAGTTTA
CTAACATTTTATCACAAGTTAATAAACAGGATCGGTGACATATTTCTTTAAAAAAATGAC
TAAAATCTCTCTCACACACACACATGCACACGCCCCCGTGCGCGCACACACAAAGCAATC
GGAAAATAATTCTAGTCGAGGCTGATCACTAGCAATTCGGCATCTGAAATGCCCAAGCCC
AACAAACACAAATTTTCCAACGCATGCGGTGTCGAATTTATGCATTTGATCATAAATTCT
TGTTATTACGTTTGAAAGGGCGAGTGGGAATCTGGTGGCGATAGCAACGGTTTCTGAGAG
AGGCTACTCCATCCGCACATTTGTTATCGGCATCCATCCCCTGATGACTCCCTGTGGATT
CGCATGGGACCTTTGCACCTGCATTGCATGGGACACAAGCATGGCACCTCTCCTCCTCTG
GTGTGGGTCACACCACAATAAACAAAGTTGTTGCTAAAGGTACCATGCACCAGACCGCAA
GCAAGGAAAATTCTAGAGGCTTCTTCACCATGGCATCAAAAATCAAAAAGTTAAATTTAA
CACAAATGACAAGTGCACTATATGTGTGATTTTTCCTCTTCTGAATTCTAAAATAAACCG
GTTAGCTTGCTCACCCGCCTCGGCATAAAAAAGATCGAGCGGGTCTATTTCCCGAGGAGT
TGTACGGCTAAGTCGACTTTCAAGTACTCCCTCCTTCTCGAAATTCTTGTCTTAGATTTG
TCTAGACATGAATGTATCTAGTCATGTTTTAGTATTTTGATACATCCATTTCTAGACAAA
CCTAAGACAAGAATTTTAAGACGGAGGGAGTAGTTATTACTTCCCACGTCGACAACTCAT
GATCATTCAATTAAAAAGCCATTCGCCCGGTCCCTTTCGCAATCTTTTGTCCCCGTGCGA
TGGCCAAAAATGTTGTCGTTTATTTCTTTAGTCGATTCGCTTGAGAAATCACGTGATTAT
TTCATTATCCTTTTTCCAAGGGTAATAGGTCGACGCCGTCGGAAATCTCTTTCTTGTGGA
TGAAGAATGTATAGAGAAATTCAGAAAAAGTTATAGTTATTTGCTTGTGGTGAATGAACA
TTCTTATCTTTGAGGTCTCACACCTGGCACTTCTAGAAAGATCTACTACTGCTGTTGTAA
ATCAAAGTGATGTGTCCAAATATTAGTCGGCCAAGCGTTCCTACATAAACCGCCGGCCGA
AACAATACACCAGCCGGTTGGCTTTGGTTGGTTGGTCGCACTCTTCTGCTCCCCATCCAT
CACCACCACCACCTTATCATCTTCTCCATCCATCATCGTCATCCTCGCCACCACCACCGC
CACTTCTGCGTGTGAGCACGGCACCAGCGCCGCCGTCGTCGCTCGACATGGCCACCACTC
AAGGTCAGGAGCCACATGTTCTCCTGCTTCCTTCCTTCTTGCGTGATTAGTCCATGGTTT
CTTCTTGTGGCGGGAAGGATTGGGGACATGATGGAGAAATTAAGCTTGCTTGCGAATTGT
TTGGGCAGAGGCGGAGAAGACCAGCGTCGTCGTCAAGGCGGAGGAGGAGCCTTCCCCCAC
GGCCACGGCGGCGGCGCCGGCAGAGGAGAAGGCGAGCGTTAAGGCCGTGGAGGAGCCTTC
CCCGGCGGCTGCAGCGGCGGTGGCGGAGGGGCAGCGGCCGCAGCCTGCGGCTACGGCGGC
GCGCAGGGCGGGTGCTCCGGCCAGCCCCTTCGACTTCTCCACCATGATGAACTTGCTCAA
CGTAATGCTCTGTTTATTAGCAAATACTCTGCTTTTGCTCTGTTCATTTCAAACATAAAC
ATGAGAATTATTGGAAGATTTGAGCATACAAATTTGAACCGGTTGTTAGTTTTGGTTCGA
TTTCACGGAAGAAATTTGGAATCCTGAATTTAGTGGTGTGGTGTGGGGGGGGTGCAGGAC
CCGAGCATCAAGGAGATGGCGGAGCAGATCGCCAAGGACCCGTCCTTCAGCGAGATGGCG
GAGCAGCTGCAGAAGACGGTGGCGCCGGCGCCGGCGTCGTCGGCGCGGTCGCCGCAGGAG
GTGGCGGCGGCGCTGGACCCGCAGAAGTACGTGTCGACGATGCAGCAGCTGATGCAGAAC
CCGCAGTTCGTGGCCATGGCGGAGCGTCTGGGCAGCGCGCTGATGCAGGACCCGGCCATG
TCCTCCGTCCTCGGCGGCCTCACCAACCCCGCCCAGAAGGAGCAGCTCGAGGCCCGCGTC
GCCCGCATGAAGGACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGTCCGGCGGC
CCCGCCGCCATGATGAAGTACGCTCGTAAACACCTTCATTTCCTTCCTCCGGCGACGACA
TTAATGGCCACCGGTTCTTCTTTTCAACTCAGGTACTGGAACGACCCGGAGGCGCTGCAG
AAGTTCGGCCGCGCGATGGGCGTGGGACCGTCGGGCGCCGCCGCCGCCGGGGCGGAGGCG
GAGGAGGAGGAGGTCGTGGCCGGCGGCGAGGAAGGGGAGTACGAGGAGGAGTCGGTGATC
CACCAGACGGCGAGCGTGGGCGACGTGGAGGGGCTGCAGAAGGCGCTGGCCGACGGCGTG
GACAAGGACGAGGAGGACTCGGAGGGCCGCCGGGGGCTCCACTTCGCGTGCGGCTACGGC
GAGCTCAAGTGCGCGCAGGCGCTGCTGGAGGCCGGCGCCGCCGCCGACGCCGTCGACAAG
AACAAGAACACCGCGCTCCACTACGCCGCCGGCTACGGCCGCAAGGAGTGCGTCGCGCTG
CTCCTCGACCACGGCGCCTCCGTGTAAGCAGCCATCTCTTCCTCCCGTCCCGCCGCCATG
ATCACATCACCTGCTTGCTTGCTCACTGACGATGGAGGTCGATCATGGCGGAAATGCAGG
ACGCTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAGGCTCAACAGCCAGGAG
GAGGTGCTCAAGCTGCTGGAGAAGCACGCCTACGTCTAGGACGCCATCGCCGTCGCCATC
GCCATCGCCATGCCATCAGTCGATCTTGCAGTTTGCTTAATTTTATCATTATTATTATTT
CAGATTACATATGCCCTTATTATTATTATTCCAGTACATCTTTTCCATGGAAGAAAAAAA
AAGGTTTCTCTTCGGCTGTAATTCACATTTTATCGATCTGTATCTATTGAGTTGGAGTGT
GTGGGTAGAATTTATCTGGTTTCTGGATTACTTGTTGATCTTGCATTTTGTTGGTCGTTT
GAAAGTGTTGCTTCGTGAATAAAGAGATAAATTTTATGTGTCATAATTTATCTTGGGCTA
CATACTAGTTAATTTCATACATTTCTGTGCTTGCATTTTACCTTGTGTTTTCCTTACATA
CTAGTTAATTTCATACATTTCTGTGATTGCATTTTACCTTGTGTTTTCCTTACATTTTTA
AACTCACAGTACACGACATCTAGCTGTGTCTTTCATATTTAAACTCACGGTACCCACATT
TACTTGTACGGTTTACTCACGGTACCCACATCTACTTGTGTTTTCCTTATATTTTTAAAC
TCACGGTACCCACATTTACTTGTATCTCTCATGGTGTTGGTTTTTCGATATGCTAGCTAG
GTCGGACCATGTTTTAAGCGTTCATTTCTCTCATCTGCACTTGTAAGGTTTCCGGCCCGT
TTCCTTTATAAACTAGTAAGCTGTTGCACGAACATAATTCTTTTTTATCATTTGTTCTAG
AAATAAAATATATCAAAAAAAATCAGACAATAGAAAACTGTTTAACAATTATAAAAATAA
TATTTTATTAAATAGAGGCAAAAACTTTGTCTCATCTCAAATTCTCAATAATAAAGAAGT
TGTTTGCCTAGTTAGTTACGGAAAACCAAAAAAAACCGATACAACCCACAAAGGGGTACA
ACCAGCCAACCTGAATATCCCGTCACAAGAGGAGCGCCGTCGAGACGGACTGTGGGATTT
TCCCATATTAATCCATATGGCATGAAGAAACCATTAAATTGAGAAAGAGCAAAGATATTA
CCTCCTTTCATTCAGTAACACCGCCATGTACACATTATATAGCTTGCATATTTTGACAAA
AAGTGGCCTCTTAAAAATGTCGCACTCCATGATTTCTACTGTATTTGGCAACATCCTGTC
CAACTTGCTGGAAAAATGTCGCACACCATGATATCTACTGTATTTGGCAGTGTGTGATGC
AAATCAGACCACACATATAATAATCTCAAAAAGAAAGGGAAAGGGGCCAAGCTTGCTGGA
AATTGAAACCGAAGGGAATAAAGGAGATGGATTTGGGGATGCTCACCTAGGAAATTGTAG
AGATACTGGAAACTCCTGTTTAGAGATATTGGTATACACAGAACAGGACACTGCAATGAT
CAAGTAGTACTTCTGTAGTTCTGCAGCACAAAAAGAATTGAATAATCCGATGATCCAAGT
CTGAATATACAAACCAAAGAACAATTAATGGGTCAGTTGAGAAAAAGTTCCAACTATATC
TGCAAGGAAGCATTTCAACAAACATATGGTGGGCACGATTGTAGGGAAAACCTGCAGATA
CTGGGTCCTCGCTTCGTGGACAGCCTAAACGAGAACCATAGTGCCTTGCCGCTGCAGTCC
GGGCCTCCGGGGTAGAGGAGGCAGTGAAGTCGATGGCTAGCACGGTCGATCTCGGGCAGC
TGATCAAATAATGCAGAGGAGGACTGCTCAACGACTCGGCAGTGCTCCCAACTCTAACCA
GAGGTGGCATACGAGCAAGTGAAGGCGAGTGAGGGGGGACTCTGGTGTGGTTTTCCGGCG
GCTCATGCTCACCCTCTCGTGTGGTTGGGCAGCCATGGCAGATGAAGAGGCGGAGAGCAG
CAGTGATGCGTCCCGGTGAAGGACGAGCAACACGGTGGTGCTGCCGCGCGCCATCCAAAG
GCTGTAGAACCACCGGCTCCATGGCGCTCCTCCTCCCAGTGCCTTCCAAACCAAGCTCCA
CCAGGAGATGCCTTCTCACCGCACATCAGACGGCAGCGGTGTCCTCGACAGCAGGAAAAT
CGGCGGGCGCAACCCCAGGTCGACAGGCGTCAGGGGCCGTGCGGCCTCTTCCGGGTGTAG
ATTAGGCCGGCGCAACCCAGGTCGGCCGGCGTAGGGGGCGCGGGCGCGGCAGCGGCCAAG
GGGGGCGCGACACGGCGAGGGGCGAGCGGGG