Contig Data
morexGenes
Links



Map Locations of contig_36990 (6898 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_36990

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51610 1 1542 bp AK367129 Not available Available None
MLOC_51611 1 1254 bp MLOC_51611.1 Available Available None





CDS Structure of MLOC_51610






CDS Structure of MLOC_51611






Contig Sequence (6898 bp)

>contig_36990 6898 assembly3_WGSMorex_rbca.fasta
GCCGTTTTTCAAATTTAATTTGGACCAAATTCGAAGAAATTGACTCGGTTTTGGACAAAA
TTTAGGCGATTCCATTTAAATTTGTTCAAATTTGAAGAAGTACATAAAAACATAAAAAAA
ACTACACCATCGTCGTCCTACCGTCGCTAGCCTAGTTCATGCCGAGGAGGTGGTAGAAGG
TTGTGTAGTCGCCGCCCTGCGCGCCGCCGTCCTTGTTGCAGCCTTGCGCTGGATCGCCGT
TGAGGACGGGTGCGATCTGCGCCGGCGTCTCCTCGTCGCTGTCATCGAGGACGATGATGC
CACCCTCTTCGGGACCGCGGCGCTACGCGGCGATCACTTCTAGAGCATGGCGCTGGCGCT
CCCTCTCCTTCCGAACGTAGTCGTCGCACAACCACTTCAGGCCGGTATTAAGGTCGGCGA
CCATCTCGGCATCCTCCTGCTTGACGACGAGCGGCGTCACCGGCTCCCTTTGGCCTGACC
AGGCGAAGGTGGCCGCAGGGAGGTGAAGGTTTGCGGCGGCCCTCGTCTATAACGAGGTTA
TCGCCACGGCTGCGATGACGCTTCGACGTCTCGTGGGACTAAGTCTTCAAGGTGGCGAGC
GGCGGCGGCGGCATGACAGAGGAGGACCCTGCCATTCACCTCGACAGCCACGAGCTCCCG
TTCCGGCGCGAGAGCGATGGCGTCGGGTACTCCAGTAGTGGCTTGTTGTCGCCCTTGATG
TGCTCGAGGACGGCGTGGAGCATGCGCCCGGGGACGCCCTACCACTGTCGGCGGCCGTTG
GAGTTGTGACGCCTCCTTTGAGCCGGAAAGCCGTTGGTGGAGGCGAGCTAGTCGGTGTGG
CGGTGTTGGAAGTACACCGTCTAGAGAGTGAAGTTGTCGGTGGCGTACCTTTCTTCATGC
CGTGCATGCTCCGACGAGGACGCCCGGATGCGCGCGATCTCGTTGCGGCGTTCCACGGCG
GATGATGGAGGGGGCACAGGACGCCTCCGACGCTCAGTCCCCACACGCCCGGCACGCGGA
TGTGTGATGGCGTCGGGTCGTTGGCCTCGTGGAGGGTGTGCGCCTCCCACTCGTGCAACG
ACCGACGGCCAAAGCGTTGGCAATTGCTCCATTGTCAGGGAACCGCTCCGACATTGACTC
GGTAAAGTTTTTCAACGGTGAAGGCCAGGGAGATGGGAGAAGAGGATGGAGGGGCGAGTG
TGCGGTGAGCGGCAGCGACACGCGGCTTTTATAGCAGGGAAGGGACGAGAGCGGTGTGCA
CGCGTGATGAAAAAGGTCGAGACGCACGGTGACTTGCCATCACTACACCGCTAGACCTTG
GAATCCGACGCATTGAACCGGCGCGTGAGCCAAGGCGATGATCCGACGCATTGAACCGAC
GTGTGAGCCAAGGCGATGAAGAGGACGAAGGTTCTCGACAACGCCCAATCTCGTTAACTC
GGCAGGTCCACGCAAAAGGAATTTGACACGGTTTGTTTTCGCGTTAAATTTCTTTCTCCC
GACACCAACCAAGGCGTTGGGTTAAATTTCTTTCTCCCGACACCAACCAAGGCGTTGGGT
TCGGCATGGGTCCGCCGACGCCAATTTTGATCCAAATCAGCCGGGCGCGTGAGCCAATGC
GATGAAGAGGACGAAGGTTCTCCACAACGCCGAATCTCGCTAACTCGACGGGTCCACGCA
GAAGGAATTGAAGGAATTTGACACGGTTTGTTTTCACACCAACCAACGCGTTGGGTTCGG
CATGGATCCGCCGACGCCAATTTTGATCCAAATCAGCAAAAAACGAGATCCCAGGACACA
ACTAGACGGATGCGACAAAAAAGGGGCCTGTTGGGGGCGTGGCTGAAGATGCTCTTACAA
GGGAAGTCTGCTGGCTCTGGCTCCTTTGCAAGAGCAGGCCAACACAAGTGAAAAGAAATG
GCACGTAAACATGGTATTCTTTTGGGAAGACAACTCAAGGCATTTCATGATTTTCATCAA
CAGTACAAATTTATTCTTTCACAACAACAAAAAAACTGTAGATATTCATATCGCAACAAT
ATGTGACATGGCAGCATAAGATGGCACCAGGAAGGGGTTGCATGCCCAAAAGCTTAAACA
ACAGTCGAGCTCTTGCTATCAAAACTGGTGATGATAACTCAAGGCCATTTTGTTACACAG
ACAAGGGGTCCTGAACCAACCCGTCAAGAGGAATAACCAGGGAGGTACACAAGTGAACGT
ATTTTCTAAAGTTACCTCCGCCTGGGCGGATCAGAGGACCTGCGGTGTTGTTGTTGTTTG
GCATCGGTATCCGGTTTCTCAGTGTCTGACTGTTTGAGCTTTCTCACCATATCATCCGCA
TATCGCCGCCAAATTGCCTCTCGGTCTTTGCTTGCCACTTTTATGTACCTTGGATCAGAT
CTTAACAGGTCTTTTGCTTCGCTCCAAGAGATAGCCGCAGTCTTTCCTCCATCTGTCGTC
CGAGTTGCTGCCTCTGGGGCAATGGCCTCAGACACAAGTGCCCTGAAGTCACGGACACAG
CGCTGTGGGGAAATTATAGGAACATCAGATCAGGTCAAAAGCATACCATAATTTTAGCAT
TCAAGCTCAGATGATACGCATCGTGGCCAAAATGCTACCACGTCTGCTTAAACAAAGAGG
GTTTATTGAAGTAGCAATGAACCAAGCATTGAAGCTCAAACAAAAACACATGAGATAATA
CCATCCATAAAGACTTCCATACGATAGTTCATGTGAATCTGCTGAATATTTTGGTAAATT
CCTCTTATCAAAGAAGAAAATGATTGGAACAGGCCAACAGGCTCAGAGCCCAAGAAGCAG
ACTCAAAAAGCAAACAGCTAGCACCAGAGAGTTAGAATTTTTATTACAGTAGCTACAAAC
AACCACCTTAGTAGGAATATACCTCATATAAGTCCTTGACATGCTCACGGAATAACTTCT
CGGCCTCACCTTGGCCTAAGTCCGGATTTACAGCACGACCTTGCGGATCCTTCTCAAGTT
TTGGTTTGGATTCAGTCCATGATGCCTATGGAACAAAAACAACATAGTTAATGTCAGTTT
GTATTTTTGCAAAGAGGCAACACGCCAATAATCAAAAGTGAGTGTATCCTAATATATGAA
AAGGAAGTCACTTAAGGAGCAAAAGAAACAGATCGGCTGAACGTAAAAAAGTACTCTGAC
AAGTACTTAAGACCAAGAAGCATGTACAGTTAAATTAAGAATAAGTAAGTCAACCTAATC
ACCTTTGGATCTTTTATAGTTTCAACAAGCAAAGCCTGATACGAAGACGTGGCATCTTTT
CTGCGGATCTTCAATTTTACTCTCTCCATTTCCTGCTCTTCCCTTTCTTTCCTTTTGCGA
GTTTCGCGTTCCCTCTCCCTTAATTTGGCCTAACAATGCATACCACAGTATGTGTGAAAC
CACAATCGGTAAAATAAAGCATCGTACAGTTCATCAGCTAAGTTGACATACTTGTTCATC
CACTTTAGCCTTTGCAGCTTGCTCCACTTCCCATTCAGCGGATTTAAGTTCTGCTATGTA
TTCATTAAAAGCATTTTCTCTCTCTTCGTGCTTTACAGCTTTGTACCTTGGATCACTCCG
GAAATTTTCTTTCACCTGTATGCAGTAGTATGATCCATGAGAAAAATGACAGATCAAAAT
TACATAAAAATGACAGTTCAAAATTACATACTCCTACAACACTATACAAGTTTGACCCAA
GTAATCAATCGGCTGTTTTATATGAAGTTCAGAAGGGGCTGTTGTAGGGCCACAATTGGT
TCACACCAGCTAAACACAGTGATGCCATATGTCATGTCAATGTAAACGCCGGAAAGATGA
AACCTGTCCATGTGAAGATATATGGCTAACGTATCAAACAGACAATCATACTTCGGTAAA
TAACATCCAGATGATTACCCGTCAGGCCCCGCTTGGAATAGGGGTAAATTTATACACCCG
TATTACTTTTACAAGTGTATATCACCAGCCATGTGTGATTTTCAACGGGAAATGAAAACG
ACTGATTGAGGTCTGCATCTTTTACAGGTGTAAAAGTGTGGAAAACGGCAATCCGATCAG
GCCCTCAGTGGTAACTTGAAAATAGGCATCAAAACAGCAACTTTAAATGATAATCTTCAC
TAGACAACACGACTCCCTATGTCAGAGCCTCAGAGGCAGCTGTTTGACTTGGTCTATTGG
TCAGTTTCAACTTTCCAGAAGAAATGGGGAAATCGACAAGTTACACAAATTGTGTTACAA
AATATCATGTGCATGCAATATTTTAAATTTCACAATAGGAGAACAAACCCATACCTGCTG
TCAATATTAGAAGATAACAAAATGAAATAATCTCTCTTTAATCTAAAATTGATTCCTAAT
CCTATTTTATTTTTATTTTACATGCAAGGAAGGTGCACTGCCTTCCTTGATGAGAAGCTT
GTCCAACATCATCGGAGATGGTTTGGGCATATTAAGCGCAGGCCTCCAGAAACTCTAGTG
CATAGCGGACTGCTAAAGCGTGCTGATAATGTCAGAAGAGGTCGCAGTAAACCGAATCTG
ACATGGGAGGAGTCCGTAAAGAGAGATTTGAAGAACTGGAATATCACCAGAGAACTACCC
ATGGACAGGGGTGCGTGGAAACTTGCTATCCATGAGCCAGAACCATGAGTTGGTTGCGAG
ATCTTATGGGTTTCACCTCTAGCCTAGCCCAACTTGTTTGGGACTAAAGGCTTTGTTGTT
GTTGTTGCAAGGAAGGCGCACTACCTATTTCATTAAGAGAGAAAAACAAAAACAGAGTGG
CCCGGTTTATACAGGAAACTAAGCCGAAAAAACACACAACACACCATTGCACAAGGCACA
ATTGTGCAAAGATTAAACCCGTGCCAACATCGGCTAACTCAAAACTCCAACATCAACATG
CCTACAACCTGAATATGTGTGGGAACCCTTCGAAGACGCCTTCAAGAAGTACCGTCATCG
GTATCCTTCGACCCCCATCGAACCAAGGCTTTCATCCAAAGCCATCCACGACAACTCCGT
TGGACCTCGGGGAAAGTCAAGCCACACCAACAGCCTCCACGGTAGTCCTCGAACCAACAA
ACTGTAGCCTAGTGAAGAGGAGGAACTCTTCGGCGACAGTTCCAAGAAGCATCATCGCCG
ATATCCTTCGATCCCCATCAAACCAAGGCTTTCGCCCAAAGCCCTAAGCCCCTCCACCTA
TAGAATCCCCGGGGAAGGAGCCCACCCACTGCCAACAGAGAGCAACCCTCAGACAGAAGC
AGACCAACGACGCCGAACCCGAGAAACGACCGATTGAGCCACACAACACCAAGGAGACTA
GCAAACCCGAACGACATAATCCCCCGACCACCACCGCCACCACCAACGGACCGAAGCTGG
GAGGCGGTAGCGCCGCCAATACACACCATCGGCCGGACCACCCACACCACGTAGAGGTCA
CGACCCAGGTAGACCAGCAACCCAAGCCAACACCACGTCGGCCGGAGCACACCACAGCAC
CTCACCAGAAAGCCAGCCCAACCGAGCAGGCCGCCTAGCCCGCCGGGCAGGTCGGGAGCA
GCAGCTCCACACACCGGTCGCCGCCCCTCCACAACGCGCATCCACCCTGCCGCCCATCCA
GTCCAGGACGACCAACACCGCCTCATCTCACCGACAGTGCACGCCAACTGGATCTGAGCA
TGGAGCCCCGATCCACCACCAAAGACGACCAGTCGTCGCTCCTCCACCGCAGGAAGGAGA
TAAAGACGACGCCGCTGCATGGGGCCGCTGCCCTGGCTTCCCACGCCGCGCCGCAGATGG
GCCAGGAGGCCAGATCCGCTCGATGCGCAGCTCCGCGATGCACGCCACGCCGTCCAGGAC
CGGCCTCCATGCGCGACCGAGGGAGAGGAGCCAGCCGCCACCGGCTGCCGCACAGGCTTT
ACCTGGCAAAGTCGCCCGACGGCAACGAGGGTGGTCGGGGGTAAGCGGGGGAGCGGCGGC
GGGGTTGGGTTTCGCCCGAGTCGCTCCCCCGAGGAGCGACGCAAGCGGTGGGAATCCTGG
ATCCACGTCATTCCAAATATAGCCAACTACCATCTCAACTCGAACTGTAGTGTCACTCCA
GTAACTATCGCGTCCAATCATGTGCTCAATCCTCAAACCGCCACTTCACACCATACTGCA
TATACCTCTCACTGTTCTTCTATTTCACAAACAAGGAGCAATACTCAAAATTTCGTTGAC
GGTTCACCGATCTGCAGCTGCCGCTTCTGTCAATATTGAAAGCCTTTGGGGCCGCGTGGG
TAGGATAGCACAGGGAAGAGCGTACAAGCGGCGATAGACACAGAGAAAGCCATGCACATC
TGTGCCTGGCTGTAGATGCCTTCAGATGCAAAGCCTGACACTACTGCTGCCGGCGAGTAA
CCCAAGGAAGGAAGATGGGGTATATTAAGGAGATGGGCGGTTGTTCACTAATGATGCATT
GCTACACATTACTATTTGGTTTCTGCAAGAATTATCACATCTTGATGAAGCAATTTTCTA
TCTCCCAACCAACGTTCCCTTTATGAGGGACTGATCGAGCCTATGTAGTGTTCACCGTAC
AGCCTTATTAATTGTGTTCAAGTCATATCTAATCCAAATATGCAAACACCAGAACATGTG
AGATACTGTGCAACTTATAAGCAAATGCTTTGATTTAGGTATATTATTATTATAACATAA
CCAACTCCGCCTATGTTGCCTCAACATAGCAGGTCCCAAGCCCGGGTAAAGGAGGATTGT
GATAGGCTTGGCGAGCCAACGTCAAAACTCAGCCACTCTTATGGAGATGAAACCCCAAAA
GATTTTTGTTGGGGCGTAACCCTCTCAGCGACGCACCACATCGGAACCCAGGTGTGGT