Contig Data
morexGenes
Links



Map Locations of contig_36987 (6082 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_36987

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51601 5 1618 bp AK370788 Available Available None





CDS Structure of MLOC_51601






Contig Sequence (6082 bp)

>contig_36987 6082 assembly3_WGSMorex_rbca.fasta
GTATCCAACGGTCTTGAGAGTTGAAGACTTGTGTTTCCCGGAGGATGATCTGCTGTCTCG
AGCTGTGGATCCACCAGAAGAGCTTGAGGATGTATTAGACAATGAAGGAGTTCCTGAAGG
GGATGAAGGGGATGATGGTGTTTGTGTTGGTGTAGGGCCTGTCGGTGTTAAAGACGGTGA
CGCAGAAGGAGCAATGCTGGTATTAAATGGGTTCCCATCCTTTCTGTAGGAAAAAGAATT
AGTCGCTTGATAAGCTGTATAAGTATCGAGTACAGGAAATATTCTTTATATAGATACAAG
CACAATGTGCCATTGTAGAAGACACCAATAAACCTGAAATAGGGAAAATGTTTCTTACTT
CAAATTTGGTATGTTGAGCAACTTTGGAGGAATCGGTCCAGAAAATAAATTGTTCTCTAT
ATTTCTGTTAAAATGGAAATAAATTATCATAACGAAGCACATATATTTGTATTCATTACA
AAAGTCAAAGCTAAGATCTGGATTGGAAACTGGATCGAAGTAGTTTGACTGACATCAATA
TTCTTTATTAATCACAAAAATCATCTGCATTGCAGTGCACATGCATCACATGAAAGATGG
TACTGGCTGGTTATTGTTTTGTAGAACTGTTTGTAGGAAATAAACAAAACACTGAGATGC
CACTGTCCTGATAAACAACTGGAGCACAGAGCAGAACTGGCAGTACAGTACATAAAGGGC
TCAAATAAGAGATGCAAAATTACTTATCTAGTGAGTTGTTCCTTCTAACCAGTAAAAATG
TTGCTACATACATTTTTTGTAACTGATTACACATTGTACTTACAGAGCCAAGTGCGTAAC
TGACATATACATTGTTTAAGGATGTGGAATTGGACAGCCTTGACTGAGGAAATTCGAGGT
TGACTATGCTAAATAAGGCAGAAACTGTGTGCCATACTTGTACGCAACTCCAGAATTATA
TCAAATTGCAGTCAAATTCGATATCTATACAATGACTAAACGAAAGTTTCTGTTTAGCAA
TCAAATTCTTATAAAATCAACAATTAACTGATCAAATAATTGGCAATGTTCTGTTTTATA
TTTTTTGTTGTGCTAATATAAGTGAATCAGCAAAGAGAATGTGGATATACAAATCACCGA
GGGGCAGACTCTGCAACACATCAAGGGTCCCAGATAGTTGATTATCTTGCATGCGCCTGT
GAAATAGCATGTTATTAGAAAATCTAAAAGAAAGTAGCCAAAAAGGAAAAATGCAAGAAA
GAAGTTGTAGGCTAGACATACAGGGTAACTAGAGATGACAGGTTTCCCAACGAAGTTGGT
AATGGACCACTGAAGTTGTTGGAAGAAATATCCCTGTGAATTGTGATGAAAGCTCAAATG
TAATCAGCAAGCTGGATGAAGATTAAGGGCGAGTACCAAAAAAGAGAGAAATATGCTAGT
CCTACAGGTTTATAAGTCCAACAAGGGAACCAAAAGCATCTGGTAGTTGTCCATCGAGAT
GGTTATCATTGAGTGACCTGAGAAAAGAAGGAATGACAGATCTTGAGTGAGACAGCTTGC
AGAGGAAAGTAATATGTGGCTCTTTTGCTTTCAGGGAAAATGATAAATTACATGGCTGTT
AAACTGTTAAGTTTTGATAGCGACATCGGGATGCTTCCAGTGAGTTGGTTGTCCGAGAGA
AAACTGCGCAGTATGTAATCAGAAACACTTAAAAGGAACTGCACGATTTATTTATTTTTT
GAACAAGGAGCTGCACAATGTAAGAACAGAACTTACAGATTCCGCAGTGTAACAGGAAGA
TCATCTGGTATAGTTCCGGTGATTTTGTTGTTGCTAAGATTTCTACAACAAAGGAGAGTA
AATACTCAGAAAGCTCAATCAGGATAAGAGGACAACGTAACTTCTGCCTATAGTTACATG
TACCCCTTGAAGTTCTTAATTCACCCATGGAATATAGTTTTTTTTTTCTCAAACACCCAT
GGAATGTATGACAGGATAATTAGATGATACAACTATCAAACATGAGTGAGGGAATAAAAT
TGACGACGAAGGCCCTTACATTGTGGTTATAGCCGTGAAGTTTCCTAGGCTTCCAAGCTG
TCCTCCCATCGTTGCAGCAACAAAATTTCTACAGACAATGAGTTGATAAAAGCCCAAAAT
ATAAAAGTTCTACCAGGGAAAGGAATTTAAAGAATAATTGACGTACATCGCATCTATACT
TGAGCCAATACAATCAACACCCTGCCACTTCTCACCGCAGGGGTCTCCACCATTTGCAGT
CCATCCGGGAAGAGCTGGCGATCCAAGTGCAACATACAATCCATTTATAGCAGAAACTGC
ATGCAAAAAATGGAAGGGCAAATAAGCCATTAGGAACGAACAAGATGTATCGTAACATCG
GTAATGCATAAAAAAATACATCCACATACTGAATAAAATGCAACTGCATTTACAAATACA
GTGCCACTTGTGCACAAGGAACAGCCAAATTTAGCCACATTTTACATGACAGCTTTCTAT
GACTGAGACCTATGTTGGCCTTATTAATCAGAGGGACTGCAAGCGCAAGTTAGATCAAAG
CTTGCGTCCTACCACAAGCAACCTAACCAATCTTCCATGACATTATGCTGCATTTTTTGT
TTTCGCTGCAACCAAATCCTAACTGAAAGCAGACACGTATCTCCCCCATTGCCATCGGCA
ATGATGATAGTCTGCAGAACAGGCCACCACATTGCTTCAGTAGCAAAAACATCGCTCTCA
GCCTCCACCCTCCACATCGAAAAGAACATTGGAATTGTCTGATGTCACGACATCGTTGCT
TCCACGAACAGGCACACAAATCGAATGGGCCCATGACCTCCAGGAGTACGGCACAAGCCC
ACACCCCTACCCCTCACCAATCTGCCGCACCAAGCTGAATAATCAGCGGAACCAAAACCC
AGCACATTTCTCACCACCCACTGGTGCAACGGTAGCGCATGGAAATCAACGCCCCCTCCA
CCGACAAATCGTACGCCCCTCCCGAACAATCGCTGCACAGCAGCACAGCCCGTTCAAACC
GGGCTCGGCGGTACGAAATCCAATTACTAGTAAGCCAGAGTAAGCAAGCAGAGCAGAGCA
AAGCCAGCAACCAGGGTCCAGTGGGGAGCTCACCGTCGGCGGCGTCGGTACGAAATCCAA
TTAGTAAGCCAGAGCAAGCAAGCAGAGCAAAGTCAGCAACCAGGGGGGAAGCTTACCGTC
GGCGGCGTCGGTGAGGGCGAGCGCCCGCGGCAGCAATGCCACCGTCGTGGCGATCAACAG
CAGCGGGAGGAGCAGCCGACCCCCCGCCCGCTCGAGGCACCCGCCTCCCGTCCGCATCCC
TCCCTCCGGCCTCGGGTTAGCGGACCATCAGCAGACGCGCGCGCGCGCGGGAGCAGCACG
GCGCGGCGGGAGCAACCGCGGCGGGCAGCGATCGCGGAAACCGAGGCTCGCGCAGATCTA
GAGAGAGAGGGAGGGAGGGAGGGAGAACTGGCAGTGGTGACTTGGGGTTTTGCTTTTCTG
GTTCGCCCCCGTCTGGTTTTGTTGGCTTCTAGAATCTAGCAGCTGTAAGGGGGAGGAGAG
AGAGAGAGAGAGGTAGGTCTCCTCCGGCTGGCTTCTGGGAGTGGCGGCGAAGTGAGAGAA
ACGGAGTGAGGGAGGGACGACTACGAGTGGCGTGCGGGAGCAACGGGCGTGAAAAAGGCG
GAGGGAGGGAGGTAGATAGGGAGCGAGTGGGGAGTGGGTGAGGGGTGATGGGGAAAGGCG
ACGAGAGGGAAAGAAAAGGGTTTAGGAGGATTTTTGAGGGGGGAAAAGGGGAGGGAATTT
GCGTCCTGGGCGTTGATGGGTCAGGGCGTTGATGGGATTTTTATTCTCGCGACGGGAGGC
TGGCTGATGATACCCACCGAAGCCGAGCAGGGGAAAGGGAATGGGGCCCTGCTGACACGG
AGATCCGTTGGGTCGGGGGCGGAACCTTGGATGGATGCCATCGTCATGTTTTGCGTGCAC
GTGCTAGCTGTGGGGCGGATTGTCCCGTTTGTCTACCCATTTGTATTCCCAGTATATTAT
TGTTGGCTTTAGGGAAAAAAATGATCTGGTTCTTCCGTTATTTTACTGCAAAGGTAAAAA
AGAAAAGTAGGGAAATGTTATCTGCCGAACGTTTTGTAGAAGGCGTTTTCCCATCGAGCG
CGCCAAACTTCTCATGTCATACCAACTGAAGTTGTCATGGCAATTTTCATAAATTTGAGG
ACTAGGTTGTAGCCTAGTGGCAAGGGTGGGTAGTGGCTCGTTATGCGGCTAAGGTTCGAA
TCCCGTTGTGGTCGGATTTCTGATGCTCACCCTGAACGGGATTATTCTATAAAGCTAAAT
CCTGGATGCTAGTGTTCATGGATCTCATTTTTGACAATTTTCATAAATTTACCATGATTG
GTGGCAAAAGCTGCCATGTAGCGGAAGGAATGGCAGAAAAATCTCCATGTTGCACAGAGG
AATTGGCATTCATTCGACTGTGATCTAACAGCTTCAAGGACGTCCGTTGGAGCCCTAAAA
CTCTGATTCTCCATCAGTATTGGGGTCCAAAAACTAAAAACACATAATTACAATGTCACA
CTTTCAATGATGCGGGATTTTGCGTGCAACAAAATTCATACAACTGCAAGTTGAACATTA
CAAACAAAGTTTCTTTTTACGAGCGGGAGAAAAAAATCCTATTAATATGTGATGCAAATA
ACAAATCCTTAGGAAATTGTCTAAATATTTGAATCCACCTAAGTTCTTATACAACCTTTG
AAGCTAGAACAAATAAATACCGCTAGCTATTTTTCGCCTATCCACCGTGGGCAAAAATAC
CCTACTTAATTGCGACAGAAAATAATCAAATCTACGGAATATATGTGATTGCATATAAAA
TATGACCCAAGCAATACGAAAGAAATGGCTTCAATCTACATTGGGATACTGCAAACTATG
GAGGAGTTTCAACCTACCATGGTAGGTTGCTGATTGTGTGCTAATATAGGCACATCAGAG
ATCAAAGCCTTGGCCGAGGCGTATACATGTGAGGTTATTCAAAATTGGATGGATGGCATC
GAGATCAAGTTTGAAATTTTAGTAATAATGATTGCTCCAATAGGCTAATGTTTTCATCGA
GTTATATATGAGGAATTATTTCATATGTAATACATGGAGGTTATTGGACGAATATGTGAT
GAATCTCATCTAGATCAAGATATGCATTGAGATCATTGAGTTAAAAGAGATGAGTATATT
ATGATCGGGAAAACAAGTGAAAAGAACTTTCAAGGCATAAAGATTGAGTTCAATGAGTGA
AGCAAATATGGCAAGGCAAAATTTATGCGAAGAACAAGAAATGGTCATGATGTAGTTCAT
TGGAGGAACTCATAAGTGGCCATCAACGGGCTTTATGAGTTGAGTCGTGAAGGACCAAGA
TCTTGACTGGATGAATAGAAGAAAATAGTTCAAGGTAAAGCCATGGTGAGCTCAAGAGTT
GATAAATTATCAAGGCAATTGATTGAAACGGTCAATTCAACCTGTCGTTCAAGAGATTGT
GATAGAGAATAAGGAAGATCCAGTGATGACCAAGATGATACTCATGGTGAATCAATGATG
GGTCACCGATGATCATGCATGGCCTTGCATTGAAGAGACAATCCTTAATAGCTCATGTGA
AGATGTCATCAAGGTTGAAAAGACCAAGTTCAAGATAAGAACCCCGAGAGAATACATGCG
CAAAGCTTGTGGTCCATTTTTTGTAATGTACAAGTGAAAATGTGCTTAGTGAACTGCTTG
TCATATTAGAAATCGAGGAGTAGATTTATTAGCTTCACCAAGCAATTGTGATCTAGAGAA
GGACTTTGGCTTGAGGTAAGCATACGGGATGTGATGTCTACTACGCAACTTTATTCTTGT
AGACATTGTTGGGCTTCCAAGTGCAGAGTTTTGTAGGACAACAATAGTTTTTCCTCGAGT
GGATGACCTAAGGTTTATCAATATATGGAAGGTGTAGGATGAAGATGGTCTCTCTAAAAC
AAACCTGCAATCAAATACAAGA