Contig Data
morexGenes
Links



Map Locations of contig_36981 (8160 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_36981

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51590 4 1997 bp AK250519.1 Available Available None
MLOC_51591 3 3346 bp MLOC_51591.2 Available Available LOC_Os02g51750.1, FRAME:-3, EVALUE:0.0, 13102.m05887 protein annexin, putative, expressed





CDS Structure of MLOC_51590






CDS Structure of MLOC_51591






Contig Sequence (8160 bp)

>contig_36981 8160 assembly3_WGSMorex_rbca.fasta
TTTACGTATAAACTGATGTGTAGGATTGTGATGGGTAATTGGGGGATGAGGGGCCCCGCC
CCCACTGAAAATCAGGGGGGGGAGAGAAGAATTAGTTTGGAAGGTTAAGTAAACCTTTGT
AAGTCTTTGTAGGTCTAGCATTATTGCCGGTACACACTGTTTTTCTTATGTTGTTATTAA
GTGTTCTCGGTAAACAACTCGTGAAGGATGTTGATATGCCTTTTTATGTTTGCCCGCGAC
ACCTTGACTCCTTCACATATATACTATTGTTGTTTAATTTCTGGAATATTTATCTCTACT
ATGGGTTCTTGTATAAAATAAAGTTGCATAACTATCACCGTTGAGCTTCCTTGCAGAGGT
TTACTTTTGGTACTACACATGCTTATATATTTTCTGTTTTGCAGTACATAAAGTTGTTGG
GGGTCAACCTATGCCTCGACTATTTAGGCTTGCTTTTTCTGCTGGTAAGGCGATGAACCT
GATACTGGCTCTTGTATATTAGTAGTGGCATGCAAATGCATATGCAAGCTTTATATTTCC
AAGTTATTAAAAATATACCGTAGCTAGGCCAAAACAACTTGGCGTAGTTGAGGAAGCATG
TAATCTGTTAGATAGTTGCAGCAGTAGATGGTCTTTCAAAATTTAGATTAAACCGAATCT
GCTAGCTGCTAGTATATTTTTCCTGACCTGGCAGAAAACAGGTCTAGGGAAATAAACCTT
GGGCACGACCTTCAAAATTATTCGATGAATTGAGTCGTATTCGGTCTTGTGCTTGCATTA
AACTTTGTTTTTTAGTGAGATGCTAATCTGATGGAGCAATATTCCAGGTGCTGGTTTGAC
TGCAGGGAGGATGATGTATTATGAATCGTTGCATGCAACTAGCCTATACATATTGGGCAA
TGGAGAGGAGCACTTTGAGCGCTTGAAAATGGAGCTAGCTAATATGTGTGGTTTGCTAAA
TCATACTCTGTACCTAAATAATTGTAGTTGGGGAGAACTAGTCTAGTTCTCCCCNNNNNN
NATTATTTAGGTACAGAGGGAGTAATAGCTATTAGCTAAAAAAATCTGTGTCAACTGTAC
TAGCTAACTGCCTATTTCACTTGCAGAATACTTACAAAGCACAGTGATGAAAAATTATCG
GTTGAAGCTGTAAAAAAGCATTTCTTTGCCGAGAATTTCTACACTGATCAATACCAGGAT
AAAGCACGTTTCCGGTGGCACCCACGTTACTCGTATGTTGACAGCACCTATTTGGAAAGA
GTGAAGGAGATTGAAGCCAACAACTCAGTGGATAAGGACAACGCCATGTCTGTCCAGACA
ATGGTAAAAAAATGCGACTTACAACTGATCTTGCGGTTTTTAAGAACTCAGAACATAAAG
AAGCATCTTTGTTTTATGGAGGGAAATCTATGCAGCCTTTTGCAAGCAAAACTTTATACC
TTTTTTGCATCCATACTACCGAAGCAAATCAAAGCAACATCATTCTTCTCTTCGTGTTTG
TAGGGATCATTTGGTAACCTCATGGAGGACCCACTGGCCTGTATATTAGGTTCTCCAGAC
AGCGACATGGAGAATGATAAACCGCCTGAGCGCACAGCTACTATCCACAGGAAAAGAGAC
CTTCGAGCTCGGAGGAGAAGTCAGCGGCATCATCGTCGACATGCGGCATTGTGAAGGTCC
GATATTGTCACTTCCATACATGGAGCAGTGATACTTGATGTTCGAATATTTCCATTTCCC
TTCAACAATGTTGCAAACATACTTTTGATATTCTATAAAGAGCTCATGTGAGTCTGAGCT
CCATTGCGCCACACACTACATGTGGCAAAGAATGTCAGTACACATTTTTGTTCTCTGGTT
TTTCCATTGTGCTAACTTGAGGATGCTACCGTATCTCGAATTGTAGAATGCACTTTAGCG
CCCAATCTGGATAGCCCCTTGTCGATCCAATCCCTTGTCTAGACTGAGACTCGGCCTCTC
CATCAGGCCATGTATTTGCAAAATACTGGGCCTAATTATGACATTATGTTGACAAAAATC
ATAGTTACTCCTTTTCAGTCGGTTTATTACCATGCTGGCGTGACACGAGCTGTTCACCGA
TGTGAAGATATACTCCTTCCGTTCACAAATATTAGATGGCTTCTATATTTCAATATGGAC
TAAAGATGGATTGAAATAAGTGAACAAACACACTAAAATGTGTCTATATACATCCGAGTC
ACAAAGAAGTTAGTACATCTTATATTTGTGAATGGAGGCAGTATTTCATAAGGCACGTAC
TACTTTCTCTATTCCACATTAGTTGACGCTAAAACGGAGGAAGTGCATAGTTCATTACTG
TTCCCTCATGTGAAGGGATTACTAGCCTTTGCAATGTCTTCAGGTAGCTCATGAATAATA
ACTGGATAAAAGGGCGTAGGTTTGAATCCCTAGGAAATGAAAATGGATATCACGAAAACG
TGTTTTCGGAATGGGGTATTCAGCACTGCATGTGCAAGACTTGGCTTTGAGAAGAAGAAG
ATGCAAAATAGGGTGAGATGAGCATTATGTTGATTAGGATAAGAGAGATTAGAAATATTT
GTCTATCTGTGTGCACTCTACTATCTATAATCAGTTAGTTGGGTTTTGGGGGTTCAGGGG
TATGTTATCTGATTTTATAGTTTCGGATACCATTTTAATTGGCTGAGGTCATTCCAGTCC
CCTCTTGCTCCTTCAGCTAAGTAAACAATATAATCCTGAATCTGGAGTAAACTTTCAAAA
CACCAATGATTCTCTATAGACATACAGTAGTAAATTATACCAGTAGAAACAAATGGATAT
TCTCTATAGACGTGAGCATCCTATGAAGAATAACACCAGTGCAAATGATTATTCTGAATC
CGGAGAAAACTTTCAAAACACCAATGATATTTCTGCAGCTTAAATGACGAAATGATATAA
TTTATCGGAAGAGCACTGCCATGCAGGCTAGCTTATAATCATCCATGAAAAACAACACAC
TCGCCAGTTTTATACGCTCTTAATCTCTTATTCCTCCATCAAACATAAGGTAGATCAAAC
ATATGACCTCAGTACTCTGCTCCCAGAAGTGCAAGCATCATATCTTCATAGTCTCTGGTT
GTGTCCTTGGAAACAGCCTTCTCCAGGGGGACGCTGTTCCTCTTCTGGTACGCCTCCTTT
ATCACCTTCAGGTCCACCTCGGCACGAGTGGTTATCACCCTAGTAAGGGTGTGCTCGTCT
GTACCGACACCACCAAGAGCCAACCGGATGACCTTCTCAAAGTATCTGTCGGGGCAAGTG
AAACACCTTATGATCGCCCTCAGGGTCGAGAGGAACTCGTCCTTGGGATCTTCCTTGAGG
TCCTGTTAGTGATCAGCAAAAATCATTATGAATCGGAGCCATGTCTCCTGAGACTGAAGT
GTGAAGAAATACTCTTCTATATGACGTATGATCATTTGAATTCCAAATAATTGTGTGCAG
TACAAGTGTCTAACAGCGACAATGCTAGTGAACGGAATAAATCATGGAAGCAGTTTTATG
TTACCAGTGTCTAACCAAATTCACCATTAGCATATGACATAGTTCAACTCGAAGGCGCAG
CGTAGATCAGTGTGCTGGCTGTATGATGCGTGTTTTTCTTCATGGTTTGAATGGAAAAGG
CATCTATAAGTAAGCAAAAGGAGGTGAAGAATGGTCGTAATTCTACCTTGGTGATAGGGT
GACTGAACTGATCATTGTAGCTGTTGAATGTTGCAAGTAGCTGAGCTTTGCTCCTTGTAG
TGAGAATCCTGACGACCTCATCATCACTGTAGGCCTTCTCGCTGATCTTCGCATGGAGTA
TCTTGGCTTCAGAGTGCGCCAACGACGTATTCACCTCCGGGCCATCATAGCGGTACGCGC
TTACAAGAGGCACCAAAAGCTGAGATGAAGAAATCACATTTTTAACTAATTAGCTGTTCA
TTGGCAGCGCTGATATGTGCAAATAAGTATTCCAGAATTGCAGGCAGTTTTTAGGCCTGG
ATAAGTAGCACGCCTTAAAAACAGAGCAAATGTAATGATACCAAGCTTACCTTTTTGAAG
AGTAACATGTGACAACCATAGAAGGACGACTGCAAAGTATTTTCTAAGTATTTTGTGAAT
GCTGCAGGTTTTTTAGATACCACTGTTTTATTTACTGCGACCTGTTTGACCAACGTTAAA
AACTGTGTTATTGAAACTATGCACGCTGATGGCAAGGGCTAACCAGCTACCTAGCTATGA
ATGCATGCACGGTGAACTATTAGCTAGTAAATTTTACAACACTTTGTGGCCTAACCAAAC
ATGTCCTCTGCATTGTGATTACTCCAAAAAAACATTGTTATATTAAAACCATGGTATTTT
GTACTTTGGTTTTTTAGTACTTAGCTATCAAACAGGGTTTTTGTTTGACGAGTAGCAAAA
GCATAAACATTTCATCCGTGCCCTTCATCTAGAAGTATAGGAGTGTTCAGACAAAGCGAA
AAAGCACAAACACCATTACTCCTAGACAAGGATGATTAGAGGCTTAACAAAGTCATCTTT
AGTGCGCCGTAGTGATGTGCTAATCATGGCACCGAGAGGGTGAGATTTTTAACTAACAAG
AGGAGAACATCTCGTGACATGGTAATTAAATGATTCAGATATTAACCGGCTGAGAGCTAG
GGAGGATCTCATTGGCATTTCGAAGTCGTATCGTCACGTCTCATGTTTTCTAATTTTGGA
CGCATCAAGACCCACTCTGCCTCAGGCGCGGACGAGATCTCAAGGAAGTACAGTAGGTGG
GATGAATCGACGAGAAGAGAGACGTGACCGACCTTGCGGAAGTCGCCGGTGACGTGCGCG
GCGACGTCCTCCTCGAGCGAGCGCTTGAAGCGGTCGTGGTAGGCCTGCTTGGCGGCGAAG
AGGTGCGCGGGGGTGCGCGCGCAGGCGATCTCGACGAGCGCGCGGCCCCCCGGGTTCCAC
TTCTTGGCCTCCTCGTTGGCCAGCACCGCGTCCCGCTCCGCCGGGTCCAGCGTCCACTGG
ATCACCGCCCTCTGCCACACCACCAGCCAGGCATCGGATCAGGCGATATATAAGATATTT
TACATGGCGCTGGATGGATCGGATTCGGATGGGTGGTGGTTACCTCGAACTTGCCGTGGA
TCTCGTCGGTGATGGAGCGGAGCAGCTCCTCGCCGTAGGCGTCGGCGTAGTGCTTGCGGA
TGGCGCGGCGCTGCGCGGCGTCGCGGTGGGCCAGGATGGAGATGATGAGCCGCTCGTTGG
TGCCCCACCCGGCGAACGCCTTGCGGAGCTGCTCGCAGTCCTCGGCCACGGCCGGGACGG
CGGCGGGGACGGAGAGCGTCGCCATTTCCGGTCCGGTCCGGTCCGGTTCGTCTGTCCGTC
CGTGCGTGTGCGCCTCGCCGCGTTCCGGGGAGACGGATGGATGTGGCCGTGAGTCGCGGT
GCGGAGGGGCTTTTATGCGCGCGTGCGGAGGAGAGGAAGAGATGGTGACCGACCGACCAA
CCGACCAACCGCAATGCCGCGTCCGTCTGGGCAGCGCCACACCACATGGACGGGCCGACA
AGTCTCCGATCCCGATGCAGTCAGTGAAGTGGAGGGGTTGGGCTGGGCCCCCGCGGGCCG
GTCGATCACCCGCCCCTATCAACAATCTTCTTCTTCTTCTTCATGTCTGATTTCGGTGCG
TGTCCGTGCCACGATGGTGGCCACTAGCCACGTCGTGCTTTGGATTGGAAGAAGAAAAAG
AAACAAATATTAAAAAAAAAAGCGACGTCGTGCTGGATTGTAGGAGGTGGCGTCTGCCGG
CCGGCACGGGCACTTGGACCTGGTTAATCAACGATGACACTTGGACATGTAGGAATAGTA
GTTAACTAGCTGAGTGGCCTGCTCGATGAATTATGCGAAAGAAAGAAACGCGGGGATGTG
CTGGCCGGTATGGCATTTCTTTGTTTTTAGTCAGAAGAGTGGCTTTTCTTTCGAGCTAAG
CTATCCCGGACGGCACGTTTTTTCCTTTCTTTTTTTGGGACAGAGTGGGGTACCTGACGC
TGACGAGAAAACGACGCGGCATTCCTCCTCGTCGCTACTCTGCAGCTGGTGAAATTTCGA
GCATGAGCCAAGACAGGCCTGTCAAGGGAAGGCCCGTTCCAGCAAAACTTGTCATGCCAA
GTGAAGTGTGGGTATCCCTCAAAAGGAAAACTGATGTGGGTAATTCTAAGAATGACGCTT
TCAAATATTTGTGTGACAGAATCTGAAACAAAGTAAAGGGTTGGATGGAGAAATCGTTGC
CAGCAGGGGGTAAGGATGTACTGTAAAGGGTTGGATGGAGAAATCGTTGCCAGCAGGGGG
TAAGGATGTACTCGTTAAGTCTGTTAGAGCATGGTTAATAGTATAGCCAACTGCTAGCTA
TAAGCAGTTCTTATAGCCCACCCACCTTATTATAGCTAGCCAGCCTGTACAATAGTTAGC
TATAAAAAAGTACTACTTTAATCATATATGGCCCACGTTTCATTCTCACAAAGCACCTAT
GAGCACGTGCTAGAGCTGGCTCTTCACGAAGAGTCCGCTTCCCTTCTCTCTCCTCTTCTC
TCTCATCCAACTCAACAGAAATATAGTATTTTAATCCTTACNNNNNNNNNNNNGTACCTT
ATTGTACTTGCTCTTACTCAGGCCGTCTCGGTTTACTCAATGTCTCTGTTTCTAACTCCC
TAGAGTGCTACTATGTTAGCACATTAATTCTTTGATAGAAAATTTTGGTGGAGAAGCAAA
GAGGGGGAAAGAAAGGCCAGCTTAGTCTCTTGGGAGGTAATGAGGAGATCGAGATATGGG
GGCGTGCGGCTAGGCTTCCCTGACATTGAGCTGTTTAACCTTGCACCTTTAGCGCGACAT
GCATGGCGCTTACTTTAGGACCCAAATTCTTTGAGCGTAAGAATTTTAAAAACAAGGTAT
TTCCCAACTTCAGAGTTCTTGTAGGTCGAACTGGGCAGCTCACCATCTCAGGTGTGGCGA
GCTATATATGAACGAAAGGGAATTATAGCTCAAGGGTTAATTTGGCGAGTTGGTAATGGA
GAGACCACTCATATTTGGCGCGACAACTAGCTTCCTCGTGAACATAACATGAGGCCCATC
ACGAGTATGATACAAGATCCGTCGCAACTAGCTAGTTAGTGAGCTCATTCTACACAATGT
TGGGGACTTGAACCACTAGTGTGGAGGACTTTTGATGTAGAAGCTATTCTCTCTCCCCCC
ATATGTACGAGAGGGGTGAATGACTTTTGGGCCTGGACCACGATCCCAAGGGAGCCTTTT
CAGTAAGAAGTGCTTAACGCATGCTCGTAATAACAAAGATGTGTCATGATGCACGTCTGG
AAGGGCAGACCGACCCGTCTATCACAAAGACCGAGCAACGATCTTGGTGTCAACTGTGGA
AGATTAAAGTACCGTCAAAGATAAGGGTGTTTGTTTGGAGATTGCACCAACAATCCACAG
ACTTGCTTCATTATCAAAATATGGCAGCCGCAAGTAACTACAATTTGTGTGGGAGCAAGG
AATCATGGCGACACTCATTAACGGAATGCAGCATGTTGAGGTGCGTCTGGGAACTTGAGG
ATGAGGATCTAGTATCCGTGATAAGAGAAACAACGAAACCTGATGCTAAATGTTGGGTAT
TCACGGTTGAAAGTACGTGTAGTCCCCATGTGTGGTTTTGGTANNNNNNNNNNNNNNNNN
NGGACTAATGTTTGCATTGAGTTATACATTTGAAGGAATGTTATATGTGCAATGCGTGAA
GAATATTGGACGAATTGAAGGATGTTTGTTCCATGAAGATGCAAGAAGGAGCTCGAATGA
ATTCGAAATGAATGCCATATACATATTGTTGTGCATGCATCAAGGATGATCTCAATGATT
GAATCAAATATGATNNNNNNNNNNNNNATTCCATGTGATGAACAAGATGTGATATATGTG
GAGTTCATTGAGGATTTCAGACATTCTCATACTTTGGTTTATGGTTTGAACCATGATGGA
TGAAGATTTTGAGAGAATAATTAAAGAGAATAATTCTACATATGTCTTTAAAATAGGATC
ATGAGGAGCTCATATGTTGAGTCATGGATGATTATGTCTTCAAGCAAGTAATTCAAGTGA