Map Locations of contig_36977 (9036 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_36977

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51583 2 2253 bp MLOC_51583.2 Available Available LOC_Os03g12030.1, FRAME:-3, EVALUE:0.0, 13103.m01366 protein 3-ketoacyl-CoA synthase, putative, expressed
MLOC_51584 1 147 bp None Available Available None





CDS Structure of MLOC_51583






CDS Structure of MLOC_51584






Contig Sequence (9036 bp)

>contig_36977 9036 assembly3_WGSMorex_rbca.fasta
TCTAGAGGGATGCACTGAAGCGATGGGAAGTCCACCGCCGCTGCTACCGCATCTCTCTCT
CCTTCCCCACCGTCGTCATCACCTCACGACGGTCTCTGGAGGGAGCTCATCGAGTTCATC
ACAAGATAATAATCTACTCCGTACTACATCATCCCAAACACATCTAGCCTAAGATTCACG
AGATCTATCACTAGCAGCTCATCGCACCTTTATCTTGTTGCTTCTGCTTCTCAATTTTAT
TGAGCAGCATCTAGTCCAGAAAGATAAAGAGTCGCTGCTGAAAAATAAACCCTTACGTAA
AATCACTCTCATGCTTTTGTTTCGCACAAATGCAGTGCTGTAGTACAAACGAACTGGCTG
TTAGGTCATTGACAAGCTGCAGTGCGCCATCAGACATGCATGGCGTTAAGTTGAGGCGAA
TGCTTGTACTGCACTAGACACGGCACGTCGACTGCTGAGAAAATTGCCTGATTTTTCTTT
TGTTGCAAGAAATGATTATTGGCCTAAAATTCCCGTTGGAGTACATACGAAGTGAATGGT
TGACGTCGTCTTCTGAGTTCTGATATATAGTCGTCTACTTCAGTTTATGGAGTCGTTGTC
TACCATAGTCAATGGTTGTTACTTTTTACGCCAGGAAGGCGATCTGGCGTCAGTCAGGCT
TGCAACCAAACAGAGGGCTTATTCTTGCGAGACATGCTCGACCCGGCCAATGTTGTTGGC
ATCGCATGGGGACCTGGTGAAGCCGAGACCTTAATCTGAGCTGGTCCGTGGGACACATCC
TCCCGTTTCAACGTGGGCGAAGCATAGGCGGGTGCAGTAAAGCTCGATGAGGATGATCGC
CAAACCAGGACAAGACTGTTGGTAAGGAGATCTCGTCCCCTCTCCCTGTACTAGACATCG
TTGTTTGCCCTGTTTTTTTTTTGGGGGGTACTAGTAGTTATATATGCTCGTCTTCTTTTT
CTCCACCACCACGCAACTCCGTTATGAGATGGTGCTTTCCAGCGTTTGTTTTACTGCTGT
ATGTCGATCCAAAAACGCCTGGCTGATAGGAATAGGATAGGATAGGAGCGCAACGACGAC
AAGGAGACCCTTTTGCTAGCACGGGCCAAAACAACGGCGAGCGAGGCGAACTCAGTCGTA
CCACCACTGGTACTACGTGCCTGAGACTCTGAGGTCTGAACAGTGAACGGAAGCCTGAAC
CGATAACGGACGGAGCAATAAATTTCGTCCGCCCTGCCCTGTCCCCACTTCCACGGCGGC
CTCCTCCCCCACAGCGAAAGCGAAAGCAAAAGCGACGCCAACGACGACGGACGGCCGTCC
CTCGGCGGCAGCGCATTAAACCCGGCGGCCCCTTCCGCGCCAACCGCGGCAGGCAGGCGA
AACGAAAGCGTGGCGGCCAAAAAGGTCAAGGCCAAGGCGAGGGCGAGGCTGGTATCGGCG
CAACCAACACCCACCCCCCGGCGCCAGCCAACGCATTTAACGCCTCCCAACCGCGACCAC
AGCCCAGTCTCAGACCTTGCCGCCGTCACGTACGTACGCCTTCCTCCTCCGCGCCGTGCT
CGCCGCCGCCGCCGGCACCTACCCAACCCGATCGATCCACGGCCCCGGCTCCGCCACACG
TACGATTAACACCAGCTACCCAGGTAGACGTAGACGTAGACAGACAGACAGGCATAATAT
CCTAGTAGCGTGGGGCTAACCCGTGGCCGGTCACATGGCCAGCCATGGCAGTAGTTCTAG
TCGTATCATCATCAGCTCATTGCCGCCATAAATACGCGGCCCGCCAGCTCCGTGAATTCT
GTCTTCTTTGCGTGCGTGCTCCGGCAGGCGGGCGGTAGAGAGCTGAAACAGACGATTGAT
TGATTGGCTGGCTGGCTCCCGATCTCTGAAAGCCTCTCTCTTCTCCTGTTCCAAGGAAAG
GGCCTCTTCTGTTCAGGCAAACTTGTCGCCGCTGCAACTCAACTGCATTTACTAATTACG
TACTGTACTTACTCCTCCTCCTTTAACCATGCAGCTCGTGCAAACGACACATAAACATCT
CGAAGAAAGTCGAACTTAGTACCAAGAGGGGACACCTGTACGCGCATTTCCCAGTCAGAG
TCGCGGCATTTCTTTCAGCACATCCGTTTCCAAGTCAGAGTAAGCTCTAGTAAAATACCA
GTGGTTGGGGGCGCATGATTGTAAACCTAACGACCAGAGTTCGATTCTCTGTCAGAGACG
AATTTCTGGAATTCTCATGAGGGATGCTTCTTCTATATCAATAAACCATNNNNNNNNNNN
NNNNTGGAGTTTCATTTTTTTTTTTTTTAAAATACAGAGCTCACTCTGACTTGGAAATGG
ATGTTGAACCCCACCAATCGGATTTATCCGCGCGTATTTGGTCCTAGTTAGCGAGCTAAT
TGCCTCCTGTAATAACTTTGTTGCCGGTTTCTTTAATGGGAATCGATGAAAAGGCTCGCT
CATGGTGCAAATGTATTTTTGTTTTTGGTACTAATGTAGTACTCTTATATGGATGGTGAG
TTTTATTATTCCGATTAATACGACCATGAATTCATGAGTACCTCGTGATTGCGCTTACAG
AACATATGCAGAGAAGTATACTCATGCATAAGAACTGAAACCTCGAATGACACTCAACTG
CTGACACCAAACAGTATTGCTCTGACAGTTACTACATCATCTGACCTAGTATAAGCAATA
CCGAGCGGTACATGCATGCATGCACGAGAAGAAGTCATGCATGAAGGGAGGCTTACAAAT
CAGGAGCGAGCATGCAATGAAAGTATTCCTTTCACTGCAGTGAAAATCTGTGACACAAAC
AATTTAACAACCACGCCCACGTTAGCGTCGTCCAATCCAATATAAATATACGTGTAGCCG
ATTAATCAACCTCCTTGTGAATGATCCGATCCCCTCCTTGTGTGGACGCATCCCACGAGT
ATCCATTTAATTTAATTTATCGCGAAGAAAACATAAATAAATAGAGAAACAAAAAGGAAA
AGAAAAAGCGAAGGAGAGAGACTGGTTTAATTTGGTCGGGGCCCCCCCACGGAGCTCCAG
GTTTTGGGGGACACGTACGTACATGCAGGCGACTCAGGGAAGGATACGGCGGTGCATGCG
ACCGCCGGCGGCGAGCCCGTCCGTCAGAGCTTGACGACCTCCGGGATGTGGACGGGGTAG
CGCTGGATGCAGTCGTCCCATGGCCCGTCGGTGGGCGTGTTGACGGTGCGGAGGCACTTC
CAGACGGCGCTGTTGCACTTGAACCCGCTGCCGAAGCCGATCTGCCACACGCGGTCGCCC
TTGCGCATGCGGCCCTTGGCCTCGATGTAGGCGAGCTCGTACCAGAGCGAGCTGCTGGAG
GTGTTGCCGAACCGGTGCAGCGTCATCCGCGACGCCTCCACGTGCCGCGGCGACAGCTCC
AGGTTCTTCTGCAGCTCGTCGATGACGGCTCGGCCGCCGGCGTGGATGCAGAAGTGCTCG
AAGGCCAGCTTGAAGTCCGGGATGTAGGGCTTCCACTTCTTGTTGATCACCTTGCGCCCC
ACCAGGCGGAAGAAGAAGAGCAGCTGCTCCGACATGGGCAGCACCAGCGGGCCCATGGTG
GTGATGTTGGACTTGAGCGCCTCGCCGGCGATGGCCATCAGCTCCTTGGAGAGGGAGATG
CCCGAGTGCCCCTCGTCGTCCTCCTCCTCGTACACGCACCGGTACGCGCGGTCGTCCGCG
CCCTTGTGCGTGCGCACCACGTGCACCAGCCTGTACTTGGCGCGCCGCGCCTCCCGCCGC
CGGTTCGACAGCAGGATCGCCGCCGCGCCCATCCGGAACAGGCAGTTGGGCAGCAGCATG
TCCCGCCGGCTCCCGTGGTAGAAGTTGGGCGTGATGATCTCCGTCGAGATCACCAGAGCG
TTCGAGTTGGGATGCACCTATTGGTTGGATCAGATGATCAGATCCATATATACCCAACCA
ACATGTCACTAGTAGCTGGTGATCGAATTACTACTGTAGTTGTGAAGAAGAGTGAAGAGT
GAAGAGTGTATTGGTTTGGTGGTAGTCGGTCTCCCGGTAGTTGGTACTATTCCATATACC
AAATTAATTAAGGAGAAGGTTTACGTTTACATACCTGGAGCATGTCGCGCGCGAGGTCGA
TGGAGATGAGGCCGGCGCTGCAGCCCATGCCGGAGAGGTTGAAGCTGCGGATGTTGCTGC
GTAGCTTGTACTTGTTGATGATCATGGCGGAGAGGGACGGCGTGGGGGAGAAGAGGCTGC
AGTTGACGACGAGGATGTCGATGTCCTTGGGCTTGATCCCGGTGCGGCGGACGAGGTCAT
CGATGGCGTTGAAGATGACGAGCTGCGCCTCCGCGCGGGACGCCTCCATGCTGGGGTTGG
GCGGGATGTAGTGGTTGGCCGGCGGGAGGCAGGTCTCCTCGCCGAGGCCCGAGCGCTCGA
GGATGCGGGTCTGGAAGCGGAGGCTCTTGTCGTTGTTGGAGATGAGCTTGATGTGCTCCA
TGAAGGTGGTGAAGGGCACCCTGAAGCTCGGGGAGGGCTTGTAGCAGCAGTAGTCGACGA
GGAAGACGGGCCTGGGGCGCGACATGAAGTAGACGGTGGCAACGAAGACGACGAGGAAGG
CGGAGCAGAGGATGTGGACGAGGTCGAGGTGGAGGGAGCGCCAGAGCGTGAGCAGCTCGT
CGGGGCCGAGGCGCGCCAGCTCGAGCGCCGTGGCCGCCATGACCGGCACCAGCAGCAGGG
TGAGGAAGTGGTTCACCAGGTACTGGTACCCCAGCTTCACGTACTTGAGCTTCACCGACC
CTGCCAAGCCGCTCCCCAGCGCGCTCGGCATGATCGCTCGGTCCATCCGCGCTACTTACA
GCCCCCCCGCGCGCGCCCCCGCTAGCCCGTACGTCACGGCTCTCTGGCTGGCTGGCTGGC
TGGCTTCCGTCCCGCCGTGCACCGAGGGGAGCAGAGCTGCCTGCCTGCCTGTTTCTGCGG
CGCACCGCTGGGGGTGGACGCGGCACACGTATGCGTTCACGGTGCTGGGGGTGGGATGTG
GGGCTGGATGCGATGCCGGGATGCCGGGCGGAGCGGTTGCAGAGGTGGTGGTGGCGTGGT
GGGGTTTAATAGAGTGGCGGGGCGGAGGGCTGGGGCAGATGGGCAGTTTAAATGAGGAGA
CTGGCTACCGCCACCAACCGGAGTAGCGGAGGAGAGTGAGCTCGTTGGCGCTCATACACG
GGCGCGGGATCTTCTGCTGCGTGCGACTACAGTCTTCCTCCTGGTCCTGGACGGGGGTCG
CTTTCTCCAGCCTCTGCGCCGTTTCCATCGCCCGTCTGCTAGGTAGGGCGACGCTCAACG
CCAACACGCTTCAACACGGACCGTTTCGTTTTAGGAGGGTGGCCGTATTTCTTTCAGCAT
AGAACGACCGTACCTCTGGAATTTTACAAGCCATTGTTAGATGCACATGAACATGAATGA
AACTCACATTATTGGTTGTACTACTAACTCAACCATCGGGCCAGTTATCCAGCACTTGCA
TGATCAGGTATTATTTTTACAAGTCATTGTTAGATGCACATGAACATGAATGAAACTCAT
ATTATTAGTCGTACTACTAACTCAACCAACGGGCCAGTTATCCATTACTTGCATGCAGTG
GCGGAGCTTGATCAGAATTATAGAAGGGGCTAATTCATGTAGAAGGGGCTATTCAATTAA
AGATTGGGCAAAACACCATCATCTTGTCTAATTATGTGCTAATAATATAAGAAAACTACA
CAAGCAGGGGGGCCATGGCTGGCCCTAAGGAAGCTCCGCCAGAGCTTACATGGCCGGGTA
TTATTTTTACTAAATGGCCTCTGAAAGGATCTTATGTTGTGCGCTGACCCCCAAAAAAAT
TATTTTGTCGTCTCATCCCGCCTATTGTGTCTACCCGTCCGACGTGTAATGTATATGTAT
GCACGTCTTCCATCTTAGCGCTTTTGACTGTCGACGAAGATCGGCCCCAGCGTGGCAAAC
ATTGAACACGCCAACCCGGTCGACGTGATATGGCTGGATGAGTTGCGTTTCTATGCCTGA
CTCGTTTAAATCATGTGATATATCGAACTACTAGTTGCTTTCGTATATGCAGCACACCAA
CATATTGGATAGTCCGGTGTGCTCCAATGACACGCATATCCGTTAGGCGTGATACAACTT
TATGGGCCCGCGCTGCACGTCGCCGCGCGTGCTCACTAGGCGCTTAACTGCAAAAAGGAA
AACTTGTCAGGATTGAATTAAAGTTTGAGACGTTCTCGCTTTTCATTACTCTATGACTGT
TGTGTGGGTCCCGGTGCCATTTGTTTCGTCCTATTTTGCTTTTGAAACCCCTTTTTCCTG
AAACCGTTTGGCAGGACGCGACAGAGCTCATGGGCGCTTGCATGGACAATGCCAAGCTCC
GCCAACGTCGTGAGGAGGTGAAAGAGCCCATCACCGCTCGCCTTGAGAAAGCCTAGTCGA
CCAAGATCCTTGAAGACTAAGTAGACTATAAGGACACGCCTGATTTGTGTTTTTTCTTCT
TCTTTTGCGTCAGTATTTTCGGAGTTCTCGCATGTGGCATTTTCAATATTAGGCGGTCAA
ACTTGAGACTATGCATGAGGTGTCCTATGTAGTTCCTACAATTAGGCGCTCTATTTGAAT
ATTCTAGTACGAATAACATCCCAGCTCAAAACCGGCAACACGAAAGAAGTGCAAACACTT
AAAATTAACAAATGAACAAACAAGGAAAGCTTGCAACTAAATTTAGAACACAAAAGGAGG
CCCAACACTAATTCATGATTACAAAAGGAGTCTGCATAACTTCATAACACAAAAGAAGCG
CATAACATCATAGAAGATAAGATTGAACACATAGAAAGCTAACAAGACAAGTAGAATGAC
GCCTAAGAGCATCTATAACCGGACCCCTCAAATGACTCCTCGTACGCCTACGGACGCGCC
CAGTCAATGACCTGTCAAGAGAGATAAGGAAAAAAGTGACCCAATCGGACCCCTCATATC
GTCCCTATATGCTCGGGCTGTCCGCGAATCCTCATATCCACCTCAAATATGGGGAGGATA
TGAGGGCTCGCGAATGCGCCCCCGCAATCCCGATCAGTCCGCCACATAGGACGCAACCCC
ACCCCGGACCACCTTTGTCTTTTCTTTATTCATCCTTTTCTTTCTCTCTCTTCCTCTCCA
CCAATCACGTGCAAGTGGCCGGACATATGAGGAAGAAAATAAGGAGTGTGGCTGCATGGA
CGGACAAATAGGGGACACGCCTGGTCACCGACCGGGCGCGTAAGGGGTCATATTAAATAT
GTTCGGCTGTAGATACTCTAAAGAGGACGGAAGTCCCTCTCCTTCTCCAGTACAACGACA
CGGCAGAGGCAGGATGGCACCGCCCATAGCTCCCGCTTTTGATCGGTCGAAGCCAGCTCG
TCGAAGACGTCGTCCAATGGAAAAAAGTGGACTCGGTGACGCAGCCCGGAGAGGATTCAC
CCCGCAACGGAGATGATAGCACGCACGCCCTCCATGCGCATCAATATCCGAACATTCGAG
CCAAGATAGTCCAGCTCGTCGTCCATGTAGGTGAAAAAATAGATCAGGTCGGGAAGCTGC
AGCTCGTGGAAGTCAACGAGATGGTTATAAGGGGTTGTCCCCACGGCCGGCAAGGTGGCA
CCTACACAATGGTACACGTCACATAACAGCAACACTTGCAAGGCAACTTGGTCCAGCAAG
CGATTCAGGCGATCCTGGGCCTCCTCCTTCTCGGACCGCTCACTCTCTACCTAGCTAAGC
AACAGGGACATCTGGTTGCCTAGCGCATTCGCTGCCTTATCAAAGAATGACTTCGCGTTC
TCAAGGGAATTAGTATTTGACTCAAGCAGCTTCCAAAGCACCGCCAACTCTCGGTGCTGA
CGGAGGACCTCGTCGTCCTTGGCACAGAGCTCAACATCCTTCGCCAGGAGAACCTCCTGT
GTCAGGCGCTCTGCACCCTTCACCAGGAGCTCCGCATCCATCACCAGGTGCTCGCCCATA
AAATGGGGAAACCAAGGACGCAATGTGACGGGAGGATAACCCCGGGGTAGGCTCATCGGG
CCTACTCCTTCGCACACTAGCTCCATACGGGGCAAATGCTGCCTCGTATGTCGGCTCCTC
CCTGGCCGGAAATGGTGCCCATGCCGGCTAGGGACGCGCTACCCGGCATCCGGCCAAACG
GCCAGCCGTGTGGTGGGCGGCGAGCATCAGTCCCATCAGCCCCTCTGATGATCATGGGCT
CATGACTAAAGGCAAGAGGGTGTCAGCTCGGGTACCACAGGCTAACATACATGCGGCTAC
AGTGAAGGCGGTCGTACCACTGACCGGCGCCGGCTACGATCTATCAGCCTCGCACAGTTC
CTGCACGCCTCCACCCACTCGATTACCTGTCCCGGCGTGGCTACACTAAAGGCGGGCGTA
CCGCTAACCACGACCGGGATCCGTAAGACAACGGCAACAGTGTAGTCCACGCCGAGCGTG
GAGAGCATGCACCAATCCCAGTGGAGCGCCAGCGGGTCCGAGCACTCGATGGGACCCGAC
AGACGGCGGGACCCGCAGGCGACAAGACTTCTCAGTTGAGGGGCCCTCTTGCTGGCCGGA
GAAGCTGCTAGCTGGGTCCCCTCATAACACTAAATATCCATATTGTATGCCAGGGGGTTC
GCCTATAAAACCCCCTGGCCCTCCTCCATGGAGAGGGTGAGCCATTCTTACGCATGAACA
TACACATAGGAGAGGCAGATAACAAGCCGGCTAGCTCTTTCTTCCTCCTGTGACGAACAG
CTCAAGGAGCACTCCTAGTTCTCTTGGTTCATCAACCACTCCGACAGGACTAGGGTATTA
CCTCCCCCGGAGGGCCTCGAACCTTGGTACATCGTGTGTCTCGCATTGCTAGTTACCAAT
CTCGTTCCTGGAGCCCGCCAGTGTCCTTTTGGCTCCAACCACTCTCGATTAGCCTACTCA
TGGCATCTGTCATGAGAAAACAATGACAGTTGGCGC