Contig Data
morexGenes
Links



Map Locations of contig_36951 (4984 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_36951

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51513 4 3887 bp MLOC_51513.3 Available Available LOC_Os01g12810.4, FRAME:-2, EVALUE:0.0, 13101.m01397 protein retrotransposon protein, putative, unclassified, expressed





CDS Structure of MLOC_51513






Contig Sequence (4984 bp)

>contig_36951 4984 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCGCCTCCGGGACCCCACCCGGGGGCGTCGGGGCCGCCGCCACGCG
GAAGCGCCCCCACGGCCACGGCAAGGGGTGGCACGAGGTCGACGTGATCGACGAGGAGGA
CGCCGAGGACGCCGGCGTGGACCAGGAGCGGGAGCTCTCCAGGAGCTGCGTCGCCGCCTT
CTGGTTCTCGGTTTTCGTCCTGGCCTTCACCCTCGTCTGCCTCGTCGTGTGGGGCGCCGC
CCGCCGAGACAAACCCAGCGTCCTCGTCAAGGTACATTTCACTTCTCTGTCGCCTTAAAT
TCAGTATCTTTCTCTGTCACACCTTATATAATTTGCTTCTCCTGCAGAGCCTGACAGTGG
AGAACTTCTACGCCGGCGAAGGGACGGACGCCACCGGAGTGCCGACCAAGTTCGTCACGA
TGAACTGCTCGCTGGAGATGGACGTCGACAACCCCTCCACCATGTTCGGCATCCATGTTT
CTTCCACCTCCATCCAGCTCTACTACTCGCAGATACCCATCGCCAGCGGTCAGGTAACGT
TTAGCACCTCAAAAAGCATCAGACAATTCCCATTTCCATCAGAATTCCGCTAGCTAAATG
CCTCCTCCTGCTGCTGCTCTGCAGTTGGAGAAGTTCTACCAGCCCAAGAAGAGCCGACAC
GTCTTATCGGTGAACCTGCACGGCGAGAAGACGCCCCTCTATGGAGCCGGGGCTACCTTC
GTTCTGACTGACACCGACGGCGTGCCCCTGACTGTGGACTTGGCGGTGAGGACCAGAGGG
TATGTCATCGGCAGGCTTGTCAGGGTGACACACGCCAAGCGTGTGAGATGCCCGGTTCTT
GTGAGCTCTCTTACCGACAGGCCCATCATGATCGCCCAGACTGCTTGCAGCTACACTTGA
TGCGGTGATCTATTGCTTGAGATGTTGTTAGTTTTAATAAGTACTTATAAAGGTTGTGAT
CGTGTAGATATTGTTGAAGTCGTTCATGACATAGGAACAATCTGATTAATAATTCTTCAG
CATTAGTGTTTGATTGAGAGCATAGCATTCAGTTGGTATCATAGATCACACATGCTGTTT
GAGGAGAGTCTGCTCTCTGGAATGCGAGTGGTGAGACATCTGAATCGAGTTCCCGGCGAA
GCAGAAGACCAATGTGTGTGCAGAATCATACAAAAATGACCAGCATCTTCGGTCAGGAGA
TTGGGGAAGAATTGGGTTTTACAGGTAGTGTACATGTGCTGAACAGTAAACATGGCCGCC
TCTTAACTGAGGAAGACCATCTTGATTGAGCCGATGCTGTGACTGTACAGCCCACCCTGA
TTCTGCCTTTGATTCCTGCAAAACCCTGAGGATCGCAGTCGGAGCTGACACGATCGCCAC
AGCGATGACGACGAGGGCGCCGATGATGCAAACTCTCCAGCCCTGCATGTCCCTAGCGCG
CTCGTCACCTGCACGAAACTGACATGTGATGATGGATCACTCGTTGCCTGCTCATTTCCT
CTTCTTGATCTCTGCAGCTTGTCATCGTCGTCGTGTGGACGGCTGTCCGGCTCGTCATGA
TCGTTCGCGTTGGGGCGACGACGGTCATCGGGCGAACCGACGGTGCGGTTGGCGTTCTTG
ACCAGGCCGACGGCCTTCCACGCATCGGCGACGAGGCTGTAGGTGCTCTGCTTCGGCCTG
ATGCCCGCCTCCTGCATCATCTGGAGGACCTCCTCGGCCTTCCACGGCTGCTTCTGCTCG
CTGTACCCCCAGATGAGCGTCTCGAACGTCCTGAGGTTTGGGCGCACGCCGGCGTCCCGC
ATCTTCCTGTACACCCTGGTGGCGTTGTCCATGTCGGCGACGCTGCACCAGCCGCTGATG
ACGGTGGTGAAGGTGACGACGTTGGGGCGGACGCCGAGGCGGCACATCCGCTCCAGGAGC
TCCTCCGCCTTGCCGGGCTGCTGCGCGCGCACGTGGCCCTTGGCGAGGATGCTGTACACC
TGCGGGTCCGGCTCGATCCCAGCCTCCACCATCTTGTCGAACACCTTGCTGCACTTCGCC
ATGTGCCCCAGCGAGCTGAAGGCGTTCAGCTGGTGGCTGTACGTCACGATGTCCGGCTTG
ATGCCGAAGTGCTCCATCAGCCCGAGAACCTGCACATCATCAGTTCAAGAATCAATTGAG
GAGTGATGGAATCGATCGGGATTTTTGAGAGCTCTGAGCTCGCTCACGTACGTCGTCGGC
GGCGGCCGTGTCGTTGGCGTCGAGAAAGCCCTTGAGGAGGGTGTTGAAGACGATGACGTT
AGGGAGGACGCCGGCGTCCTTCATCTGGCGGACGCACCGGAGCGCCTCCTCCAGCCTGCC
CTCCCTGCAGTATCCGCCGACGATGATGCCCCAGGTGCGCTCGCTGGTGCGCAGCCTGGC
GCGCACCATCTCCACCACGAGCTCCTCCGCCCGCCACGTCTCGTCGTTCTTGGCGTAGGC
GCTGGCGACGGTGTTGTAGGTGACGACGTCGGGCTCCACGCCGCGCGCCCGCATCCTGCC
CACCACGCCCCACGCCTCCTCCAGCCTCCGGTGGTCGCACCAGGCCTTCACCAGGATGTT
GTACGTGGTCAGGTTCGGCCTCACCGTGGACGCGACCCTGTCGCGGTCGCCGTCGCCGTC
ACCGCCGGCCATCATATCGAAGATGCGCTGCGACTCGTCAGGGCGGCCGGCAATGCCGAA
GCCCTTGATGAGCGTGTTGAAGGTGCTGATAGTGGGGCGGCAGCCCGGGTGGTGGCGGCT
CATCTTCCAGAAGGTGCTGGTGGCCTCGCCCATCCGCCCGGCCTCCACGAAGGAGTTGAT
GAGGGCGTTGAAGAAGATGGCGTCCGGCCGCAGCCCGGCGGCGTCCATGCCGGCGAGCAG
CGAAGGGATCGCCTCGAAGGCGCGCTGGTTCGTCACCGCGGTGAGCAGGGTGGTGTAAGT
CACCAAGGACGGGCGGTGGCCCTCGTCGGCGAGGTGACCGAAGAGGTCCTGCGCCTGGTG
AGGCTTCTTGGCGTCGATGAGGCCCCGCATCTCCCGCGTCCGGCTGACCACTGCCTGGCA
CGTGTGTCCCTTGGCGCACGTCGTGCAGGTGCTCGGCGGCGGCTGCGCGTCGCCGCCGTT
GCCTTGGCGCTTCTCCTCCTCCTGGAGCACCCAAAGAAACCCTTGACTTGTTTGAGATCA
CAATATGGCCACAAAAATCGTAGGTAACAGCACCCGATCTGTTATGTTTACAGCAAAACG
ACATCGAAATGTGCAGGCAAGAACTGAAATCTGGTCACAGCTTGTCACTCTTCTCTACTG
TATTTTGTAGGTGCAATCCGGTGCTTACCATGGAGGCAGATCCATTCAGCCCTTCCCCAT
TGTTCCCTGTCTTGCCCGTGCTGTTGGAAGTGGAGGCCGGTGTCAGCTGTGTGCCGTTTT
CCAGCATTGTGGTGACGCTACTATATGATGCTCAACCTGGCCAACAGTGTCAGGATTCAG
ATGCCATAGTTCTGAATGATGTTTCTGAAACCAAGTGAAACGCACACAATGCAGAACACA
AACCCACTCTACATTCAGTGTTGCTATAAATACTTGTATACTGGAGGAATAATGCGGGCG
GGAAGGGAACGCAGAGGAGCAAAAGGAAAGCGCACATAAACCTCACTTTGGCAAAATAAT
CTGCTTGAACAATTTTACTACTCTATCTATCGGCAGGTGAGGTGAGCACGCATCCCTGAA
TTTGTCGTTGGTATCATCCATTCTTGGGCGGGTAGACCGGAGGAGGAGGGCGAGATGCGT
GCGTGGCCACGTTCGGAGCTCGCCGTCCGGTGACTTCCGCGGCGCAGTTTAGCAAAACAC
AGCAAGTGGAAACACCACACTGCGATTCTAGCTAGCGTCATCGTCTCGCAGCAGAAACAC
AAGGAAAGGATCCCGCCTGGTTAGGTACGTCACCTCATCCGATGCGGCGGAGTGTCCAAG
CGTGCCCCCACGGTCAGCCGCGCGGCGTGATTCCGGCCAGTATGGCCGGAGGAGGAGCAG
GGGCGTAGGAGGGGGAGATGCCAAGGCGTGGCTGTGAGGGGCTGCGCTTCGTTTTTCTTT
ATCCGCAGGGGACGGGGCTAGGAAACGATAGGCGTGGCCGTGCGGGCTCCGGTGACAGCT
CGGCGGGGAACCCCGAGCTTGTGGTGGGACCCATGCCCTGGGAGCCTTTTTCTTGAATCT
TTACCTTATTTAACACAGTAATAACTACCCCTCCGTTTTTAAATATAATTTTTTTAAATA
TTTTACTAAAAAACTACGCACAGAGTAAAATAAATGAATGTACATTTTAAAATAAATCTG
TATACATTCGTATATAGTTTATATTAAAATCTTTATAAGATCTTATATTTAGGAACGAAA
AAAGTAATAAATATGTCTGTACGTTGTAAAAAATAAATAAATAGAAGAAACGCAAAAACG
ATGGATGAGTTGAGAGTTGTGTTCTTCATAAGTGCGGCAAGGATCTGTGCAGCATTTGCA
TGTTTCAGCCCAACTACAACCACAAGCATCACCTTTCACTAATCAAGATCTCTTGGACAT
GTCAAGAGTCACCGCAACCCCGTCTACTCTTTGTATATCATATTCACCTATTCTTATTGT
GTATTCAAATATCCTCGCATCTCGTCAACCGCAACAACTAAGAGCATCTACAACCAGATC
CTTCAAATCCTTTCCAAACATCCGTGCATGTCGTCCGGTCACGAAAATGCGATCCAGACG
GACCTTTTAAACCGGCCTCAAACGTCCGGAGACACCTCCATTTTCAGGCTAAATATGAGG
TGGATATGGGGGAGCCCGGCCGCGCTCGCCACGTAGGCCTGACGGCTTGGCCCCATGCGG
ACTTGTCGGGAAACCCGACGGTCCGACGGAGCCTCGACCGTTGGCATAGTGTGAACGCAG
CATGGCGTCGTTCCGGCTCCCTGACCGAGGTCGTGGCCGACTATTTAAGCCGGCAGACGC
CCCC