Contig Data
morexGenes
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Map Locations of contig_36941 (4628 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_36941

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51484 2 2302 bp MLOC_51484.2 Available Available LOC_Os07g02090.1, FRAME:-1, EVALUE:0.0, 13107.m00130 protein Ser/Thr protein phosphatase family protein, putative, expressed
MLOC_51483 1 876 bp AK364297 Not available Available None





CDS Structure of MLOC_51484






CDS Structure of MLOC_51483






Contig Sequence (4628 bp)

>contig_36941 4628 assembly3_WGSMorex_rbca.fasta
CTCTCTCTTTTCAATACAATGAAACGCAAAATCTCTTGCGTTTTCTCGAAAATATTTTAG
AGTATAGATTCACTCATTTCGCTCCATATGTAGTCCATAGTATAATCTCTAAAAGGTCTT
ATATTTAGGAAAGGAAGGAGTATAATATAAGATGTTATTACGACCAATTTACTAATATAT
TGGTTATAATATCTTATATTATGGGACGGAGGGAGTAGATAATTATTAGCCATGCGTTCT
TCATATGTATGTATTCAGTGCTATCATGTTTAGTTCTTTTTGCTGCTCTGCTCTCGAGTC
TCCACACATATTGGTTGGTCGTGCGTTGTTTGAAAGACTCTGTTCTTCTCATTATGTAAC
ATTTCATCATTATAGCTTTTGGCTTGCAATTCATTTATCAGTTAGGAATTTATATTTGGT
ACCTTGGATGGTGCAACAGGTAACCTGCCTGAAAATGATGAGAAATAAAGATGCTAAATT
GAAGGACTTGGAGATATCAACGGTTGATGGGTTTCAGGGTAGGGAGAAAGAGGCCATAAT
CATTTCGATGGTCAGATCCAACCAAAAGAAAGAGGTAAGCTTCCTTGCATGATCTTTCTA
GGTTAAGAATTATCCTCTGTTTCAGTGTCTTGATGTACACGGAGACATTGGTGTTGATTT
TGCATTGCATGGTTGATCCAAACAAAAGGAGACATACGATTTAATGTCTAATAAAATTGA
GCGAGCATTTTAGATATGACGTAAGTGATCTGCAAATATTGGGGTGCCTGCGGCCCTGAG
TTAGTATGTGTAATGAACAAAAAGTCTGTTTGTTCTTAATTATGATTGAAATTCATATCC
GCTACGTGGGCAGCTTGGATGCTTGAACTGTTGTCTAGTTGGTAAAACTAAAACCTATAT
CCATTTGTTTCTCCAGGTTGGGTTCTTGAGCGACCATAGGCGGATGAACGTCGCCGTAAC
ACGAGCAAGGCGGCAGTGCTGCGTAGTGTGCGATGCCGAGACCGTAAGCAGCGACAGGTT
CCTGAAACGCCTGGTTGAGTACTTCGAGGAGAACGGCGAGTACCTGAGTGCGTCTGAGTA
CCAGAGCAGCTGACCGTCGCAGCATGATACGCTGCTCTTGTGCCCGCTATGCGACCACTG
CAGCAGAGATACCGGAAACAAGCAACATGCGACAACACAAGTGGACATGTTGGTGCAAAT
CACAGCCGATGCATACATTGCCACAGAATGCTACAGCTGAACAAGCATCTGGTTAAATTG
TTCACCGTGCTGTGTGGAGTGTAGCAGTTGTAGCCACTTTGTCGACTCCTGCTCTTGGTA
TGAGTTTCTTGTTATTATTATTTTCGGAGACTACAAAGTACAAGTAGTACCGATTTTTAT
TATGAGATTGATCCAATAGTCATAATCTACTCCGAATGCGGAGAAAATCTCCAGCCTTTG
CGCCTTTGGGCAGCGGTAAATATATCGACATGGTAATCAAATGTTCAAATGAACGTCTCA
CATACTTGGACATGAAAGGTACAGAAACCTACTGGCTTTCATTCAGCTCAAGACACATGA
GCACTAGACTTTTTTTTATTATAACTGTACCCGGGTAGTCTACATGAGCACTAGACTGGA
CAATCAACACACCACAATGAACAAGATGAACAGATCTTCCATGGATACATTCATCAATAA
TACATCAACCATCTAGTACATCAGCAAGTCATCAGTAAGCGCTGGGAACCAACCACTCAT
CAGTAATACATCAACCGCACGTCAAGATCGTATTACTTCATTCAGGCACACTGGTGACAG
TGAATCTGAGAGACTCCGGTATTAAGTTGCTGTCGTCTTTACACATTCAATTGGTGTTTA
CATATGTTACAGTGGAAAAGGAAGATCAATTACCAGCACAAACGAGTAAGCAGGGTGGAG
TAACTAGGACTCCTCATCTTGTACAGGACTCCATCCTGCAGACTCCGCCTTCTTCTTCCT
TCTAACAGCAAAGCCAGCCATGAAACCGAGCAGCAACGCAAGCACCACGCCGCCGGCAAT
TCCCAGGTACCTCATCTTCCCCGGCAACGCGCCGACCAGCTTACCAGGCGAGCCGTCATC
GGCGCCGACTTGCGGCGACAGTATTTCGACCATGTCATGGACTTGCCCATCATGGTTCCC
AATGTACATCAGTGTCAACTTCTCCCTCGTGGCCACAAGCTTCGCGTACCCGAACTCACC
GCCACGGTACATGGACCGCTGCGGCTGAGGGAATATGGGGACGTCGGGGTGGTCGGGCCT
CGGCTCCCAGCTCGGCTGGAAGTCCTGCCCGGCCATGCCGATCACGACATGAGCGGGAGC
ACCAGGGTACACGAAGCTGGACGACGTGTTGAGGCACCGGTAGTTCTTCATGGGGCAGAA
CCTCTCGTACCTGTGAATGTGCCCCCACAGGGCGAGCGTCACGCCGTGCTCCACAAAGAG
GGGCTCCAGGTGCCGGATCATCTGCTCCCTGTGAGCCGCGTCCTTGGTCTCGTTGCTCGA
GGTGTACATCGGCCGGTGGCCCTGGAACACCACGAACGGCGTTCGGCTCCGGTTCACGCG
CTCGAGGTCGGCTTTTATGTAGCTGTACTGATCGCTGCCATGGGTGAAGTCGGTTTCGGT
GGACATGTAGACGAAATGGACGACGCCTGCATCCAAGGAGTAGTAGAGGTTCCGGGTGTC
GGGGGCGACGGTGCCGGTTGGGAGGGATGAGTTCCCGGGCATTCTGAACTTGATGCTGTA
TGGCACCCCGCACTCGCCGCCGCCGTCCTTTCCGTTGTATGTGTCTGCTGCCCAGGTGGG
TTTCCAGGGCTGGGATGGCCAGTCATACTCATGGTTACCAATGCAGACGTGGTATGGCGT
GCTGGCGGCGATGGGCTCGATCTGCTCGAAGAAATGATCCCATAACCATGCATAACCTTT
GGCGTAGCTGATGTCACCGATGTGCGAGATGACCGCCGGTTTGTCGCCGAGGGCCTGGAG
ATCGCGGAGGATCCATTTCACGGTTGACAGACTTTCTTGAGGTGTTCGGAAGTAGGTGTT
GTAAGGAACGTGGGTGCCCAGGTCACCGAAGAGGAATGCGATGGTCTCGCTGGCCTCGGC
GTCGCGTGAGATGAAGCTGTGTGTCTCACTCCAGCCACCTAAATCATTGCCAACCTATGA
ATAACATTTCAAAGTTCAAAAGATCAGGTGAAATGTGGCATAGATTGGAGTGCATAATTA
TACCAAATGCTGATGATGTTGGATGCTCATTATGGTTGGAACTTGAAACAATGAGCTATG
AGAAACAATTCTTGCATCATAAACTAGACTGCATATCAAAATGGCTAGTGTTCTAAAATG
AAATTTTGCACAACATTCAGACGATCCCATATGATTCTTTTGAGGCCCCAAATTGAATCT
AGGATGTTTGGATTATTAGTTCAAATCTAAAGTTATGTGGACTTCAAAAAAATCTGAAGC
TATGTGACTACTGTACCTTGTAGGAGTACCTTGTCCCAGGCCGCAGCGCCTTCATGACGC
CGTCGAAGACGAACCCGGGGTGGCGCCACCCGACGCTGTGGTTCGCCGGGTGGCCGCACA
TGTGGCGCCGCTCGTACGTGCTCGCCTCCGCCGGCACCTCCTCCCACTCCTCGCGCCGGC
CGGCGGCGGCGGGCCAGTACCGGACGGACCTCCTCCCGCCGTCGCCGCACACGAACAGCA
CCCGCATCTCGTCCGCCTCGTCGGTGAACGCCAGGTGCAGCTGGGCGGGCCGGGCGCCGG
ATCCCTCGTGGGCCACGTCGCCCGAGACGGCGGCGCGGCGGCTGGCGTCGGGGAGCGGGC
CGCCGTCCTGGTCAACGCGCGGGTTCTGGCCCGGCGGCCCCCGGAAGAGGCGGAACTGGT
AGGGGGCGCGCAGGTCGGGCAGGCGCGGGAGGGTGACGCTGCCGGCGCCCGTGGCCCATG
AGGCGGAGGAGTTGAGGAAGAGGAAGCCGAGGTAGTTGAGGTCGCCGGAGGTCGGCGGGG
AGTAGACGGCCACGTAGTCGAGCGGGCCCGGGTCGGGGAGGTTGGACCATTGGAGGGTCA
CTGCGTGGTCTGGGTTGGTCAGCGTCGCCGGGGTGGCGGTGAGGGTCGTGGTGGAGGTGG
CCTCGCCGGCGGCGAGGTGGGCGGCGAGCAGGATGAGCAATGCCGATGACGACATTGTGA
TGCATCTGTTTATGAAAATGGGGCTTAACTTAGGCTTGAATTAGTGGCTGTTCTCGGGAA
GCTTGGATCAGTTTAAATAAATATTTTCACGATCGCAGTTCATGTGGATTGAGTCTACCC
AAACGAGACGCTAGGACTGATTTTTAGAGAGTTGCTCTGCATTAGTTTTGGGTAAGTGTG
TTTTTCTTAAAACGGTACAATCGAAGTCGTTTATATAAAAACACATGTTTATCCCTATGG
CTATCGCTAAGGCTGTCCGTAGTATCATACTCTCTCCATTCCTAAATACTTCCTCCATTC
TTAAGTATAAGTCTTTGTAGAGATTTCACTAGTGGACTACATACGGGTGTATATAGACAT
ATTTTAGATTGTACATTCAATCATTTTGCTCCGTATGTAGACACATAGTAAAATTGCTTA
AAAGACTT