morexGenes - Barley RNA-seq Database

Contig contig_36933

Source Contig contig_36933

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_36933 (2549 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_36933

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_51462	1	1072 bp	MLOC_51462.1	Available	Available	None

CDS Structure of MLOC_51462

Contig Sequence (2549 bp)

>contig_36933 2549 assembly3_WGSMorex_rbca.fasta
CTTTAGGGCATATTTCCAACACTCTCTTCAAGATGTTTATGAAAACTTAACGAGGCAAAG
ACAAGCAAGAGCATCACGATCGTAGGCGCCCTATAATGTTATAAATAGTTTATTTTCTAG
TTAAAAGTTGACATTTAATTGTGTTAGAAGCCCCATGCGTAATTGCCGTAGAAATCTCCA
TTTTTTGAAATATAATGGAAAAAGAAACCGACGATAAACTTCACGTTTGTGCTTTTTTTT
GGCTTATTTTCTATTTGTATCGCTCGGAAAAGGAAAAGAGAAAACACAATTAGTACAAAG
GGTAAATTGTGAAAGGTATTAAATCAGAAATAGGAAAGAAAAAAAAAATCAGACACTCCG
TGCATTTGTTGTTTTGCGGCCACGGAATCGCTCTATGCATAACCATTATCATACATGGCC
CATCATTATCATACATGGCAAACGGGCCGGCCCGACACGACACAACACGAAGCATGCTAA
ACGTGCTTGGCCCAACACGGCCCGTCGAGGCACATTTAGTAATCGAGCCGTGACGGATCA
GCCCACGGCACGGCCAGGCACGATCCGGTTACTAAACGGACCGACCTGTTGGCCCCATTA
ACACGCTGGGCTACATAATTTTAATCTCATGTGCTTATTTTTAAGCTTATTAGGTCATAT
TATGTATATATTAAAAACATGTAAAAAAATAAAGGGCCGTGCCGTGCCGGCCCGCGAGCC
CGGTCTCCAGACCCAGGCACGGTCTAAGACGTGTGCCGCGTGTCTGGCACAACCCGTTTA
AATCATGTCGTGCCTGGCCTATGGCAGGCTCGCGGGCCGGCCTGTTTAGTCCGGCCCGGC
CCGTTTGGCCAGGTATGACCATTATCACGGACAAAGCGTTTTCGAAACGTTTCTCGTTTG
GTTTCGAAGAAGTATTCGCTGACTAGTTATCCTTCCAAACTGGCTGCGTACGTGGAGCGC
GAGGAACCGAACGCCTGGCCCAAGGCAGCAAGCCCGGACCGAGCCGAACCCAACGGCCCT
AGAAAGTCGGACCGGCTGATGGGAAGGACAAGCGGGGACGGAACAAACTCAATCAAACCC
AACCTCAAACCTACGGGATCGCAATAAAGCGTAACAGAGACGGAAGCACGCAACTGATAC
ACCGGATTTCCCCCAACGACGACCTCCCATGGAGAGCGAGCTGCGGCGGAAGCTAGTTTA
GCTCAGCCGCCGACCCAACCTCACCGCGGCCCGCTGCCGAGCTGAGGACCCCAACCCGCA
GATCTGGTGGAGATCGTAGCCAAAGCTGCCGCGAGCCAACCTCTCTCTGCTCCTCACGAC
TCTTCCTCCAGCGTCGGCACAGGTCGCTTCCACTCATCTCTTTCCTTCTCTGCAGTCTCG
GTTAGCATTCCATAGTAATAAGGGTATATGGATTGGGTTAAAATCTCTGTCAAAAGATGA
ACTAAGATTTAAGCATGACTGCACTCTGTGCTGTATCGATCAAACTATGTCGGGTTAAAT
TATGTGCAGATGAATGTATGGATTAATATTGGATTTCGCTGCAAATCTCACATGTTTTAG
CATGGCAAATCGAACGCCAGAGATGGCAAATTATGTCGTCGCGAGGATGGCAAATCAAAC
GCGAGACGGCAAATACTTGCCGTGCTCAGTTTCTTTTCTAGGAACTGCCATGTTTGCTAA
AGGAAGTTCCCATTCCCGTGACAACTTAATTTGACATAAAAAACATTTAAAAAGTGTGAC
ATCAGATTTTTAGCATTTCCGTTAAATTTTTGCTAGTCATATGTATGCATGTCATTCTAG
TATGTAACACATGACATAACATGAATACATGATTACTAGCAGGCAGAAGGCGCGACGGCA
TGCCGCGCCCGTGGCTGAGCCCGCCCGGACGTGTGTGTTGTTTTTTATTCTGAAGTAAGA
GAAGGGATGACAAGGGTATTGAGGTAGATCTGGCTATGAAGAGGTCCTTCTGAAAAATTC
CAGAAATTTTCATTACGCATTGGCAGACCATGAAAAAATAATTACAATCTGCAATCAATT
GTTCGTTATTTGACACTTCCAACTTTTGTCTAGCTATCAAAATCCGATGCATCGTTAACA
TGAATTCAATGCACATGTCTCTGTGGGAAGTTTAACTTTGTAATCGTTGCAAGATCAGAA
TCGAAGTATCTTACTATTAACCTAGGAAGTCTGCAGCATGATAATTATAAGAAAAACATT
ACTGCAAAGAATTTCATCTACTCGAAAGATTTTTCAAGATGGAAAGTAACATGTAATGTT
GGAGCATGGATATCCCTTTAGAAATGGACAACAGTCAATTACAAATCAGTATGTTTCTCA
TTTCTACTAAATAAGTAAGGCTAAAAAAGGTAAAGGAGCACAGCTACCCCACAACCTAAT
TAGTCAACTGCCAATCTATGTCTGAATGCTTTAGTTCTGTCATCGAACATGTATTTCTAA
AAGATAAATCTGGAGTATTTGAAAATAATGGCATATAAATACTATGAGATTGATAAATTG
GAAGACCTCATAAACCAATTTTAAGCAAC