Map Locations of contig_369187 (4069 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_369187

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51422 1 768 bp AK359290 Available Available None





CDS Structure of MLOC_51422






Contig Sequence (4069 bp)

>contig_369187 4069 assembly3_WGSMorex_rbca.fasta
TGATGCGTGCCTTTCTTAATATCTTGCTCTCCCACCTTGAGCATCCCATGCAATTNNNNG
AGCTTCTTATCCATGCCATGCATATAATAGTTCGAGATGAACGTCCCATAGCAAGATGGA
AGAGAACCCAGAACTGCATCAGTAGCCAGCTCATCCGAGAGAGCCATCAAAGATCACGAG
ACATTGAACCTTTCGATCCTAGCCTACACCTGAAACATGCTCTTGAGACTATCGATCATA
TCGACAGCCGCGATGTCTTCGAAATGTTGTTGCACATCAGGTTCCATACAAGCCAGCATG
AGCCAGCTCATCTCGTTTGATTCATCAATGACTTTATGGTAGGCATTCTTGGTTGTGACA
TTAGCATTATGGAGGTACCTCTAGAAGTGGATCCTCTATAACATTTTCCTTTTTATCGTG
CTTGAGAATAATTCTCGGATTTCTATACCAGGTGGTAAAGTTTGTTCCATTCAATTTATC
CTTTTCGATAATTGATTTCAATGTAAAGTTTTGAGAAGGTGCTGAAATTGATCTACAGCA
GAAAATATGCAATCNNNNNNNNNNNNNNNNNNNNNNNNTAATTCAAGCCTTAAATAGAAC
TACTACCACTAAAGTCGGCATCCCTCCGCAAACTCTTAGTGATTCAGGATTTGTCTAGCG
CGAGCGACTAGTAAGCTTTAGCATCACTCCTAGCCAACTTTCCTATTCGGTAAGAAACAC
CTTGCTAATCGTAACTCTATATGACTCCTGTCGGTCAGGTAGGTATCTTATACACTGGCT
CCCAACCTTGTTTGCCAGAAGGCCCAAAACCATTTTGATAGCCTTGTCAAGTTAACTTGA
TGCAGTGTATGTCCGTGTCCGTGACAAACCCTCCAGTTCAAGGACACCTAGTAGCACCTC
AATTTTATGTGACCACCACTAGATGTACTTGACGTGCGAAGGTGCAACATCCGGAATGAC
AATGTGCTTGATATTAACGAGTGGTCTTTCTACACTATAACATGCATAGAAAACAAGAAG
CAATATCAATCACATAAATATGTGAAATAGTATGGGTCCTTCATGGACGTCCTTCCAGGC
CGGCTCCAACTCCGATGGCCATGGAGGAACTCCATCCTATTCGTCACGCCTGGACGCCAA
AGCGTCGAACTCGATCTCTGTCCTCCAACTCCTATAACTAGTAATGACTTTACATAGAAT
CAAAAGTCGACACGCAAGTCGTTATACAATATAATGACAACACTTTGGCTCCTACCGGCT
GACAATCATGACACGCAGGTCATGTTAAATTACACACATGCATCACATAAATATGAGCCA
TACTATTCACATCAAACCTGTAAAACAAACTTATGCTTAGAATCACATTCTACAAGTTTA
TGAGCCATACTCCGATCACCCCTGATTTTTTGATCTCACCGATCTCATCGATCATCGGGA
ACCCGATTCGGATTTATGTTTCACTGTAAACCCCGATAGCGGAAACCAACCCGAACGGGT
AGGTTCTGTCACGACCTCATCGATTCTGATTGACAAAAAACTTTGCCTCAACGGTCCAGA
TGTGCGGTTGATCTCATAAACCGTGCACATAGACGATCTCAAGAACGACGAGGGATCTCA
TCCGCCGCCTCCACAATCAAATATACATCTGATCTGAATACCAAATCCTATAGCAGATGC
TCTGATATCACTGCTGAGTTCTACCGTAGGCGCATCACATGCAAACTAAAATTTTCGTAC
GCGAAAAACAACCAAGAACATCCTACGAAGATAGATCACAAATCGTTACCACTAGACGCA
TACTGCCGTGCAGCGGAATTAGATTTAGGGTAGGGCGTTCATGTGGTCCATCTCCTCCTC
GATCGATCTCCCTCGAACGGCCGGTCGCCGGGTCATCTCTCTCGAACAGTCGGTCGTCGG
ATCCCACGTACAGGTTCGCTAGAGCGACGCGAGTGCACCACCTCTAACGGTATCCGCGCG
TGCAGGAGTAACACCGTCCGGTGGACTGCTAGGTCCGAATCACACGGCCGGCGACGACGA
GTGGAGATGTCTAGTTGCAACACATGCAAAGCCCTAATGACAGCACCGAAGCGATCAACC
GAATAGGTGTGCCACACCTCCACTATATATAGGCGTATGACGCGGGCTCAACTCTTGGGC
CTCGTACGGACCCTAAAGCCCATGTGGTCCTTCCCTTGAGCGACCGCAACATCGGTATTA
ATCTTGATCTCGCCTGATTCTGGAGGCTGCCAACCATGCCCCGGAAGAACGGTCGCATGC
TGCAAGGGGATATCAAGCAAGGCCAACGCCTCTTGAGTGAGCCTCACCCCGAGTTGGCCG
GGTCCAGCTTGCCTCCATCATGCGTCCACCAATTACGGGAAGTTCAAATGGACCACATCA
CAGTGATGATCGTTGATCGTTCTCTCGTGGAGAATCTTGGGTCACATAGAATATCAGAGG
CCCAAGTTGATGGGTGAAGCTGCGGGAGTTTGATGTCCAAAATCTGGCGTGCTCCTCCCA
AAGACCTCGAGCGTGTGAGCAGTGAATGAGGGCATGAGTAGTGGCTACATTACATGAGGT
CTCTCGCGACCGAGGCTGAATGGCAGCGGAGTCAATATATATACCAACAGTCGAGGAATA
CATGACAGAAGCGGTTGTGTGATTCGCATTTGGTCCAACAAAAACTCGAGGAGTTCATTA
CCAGAGGCCCAGAGTACAACGAGTTGCTTAGACTAACAAGCATCTGTGACCGTCTCCAGA
ATGACACTCGAGGCTTCGAGGTATTCTTCGTTCCGGTCTATGAAAATACTCGCTCTATGA
ACTAATATAAGACTGTTCAGATCACTGATTACGGAGGGAGTACTATTCATAGCAGTAAAT
TAGCACTGTCGTGCAGATTAATCTTGACACTGGGTAATTCATGTGATCTACTCCCTCCGT
CCCAAAATTCTTGTCTTAGCTTTATCTAGAAATAGATGTATCTAAATACTAAAGTGTGAC
TAGATACATTCATATCTAGACAAGTTTAAGACAAGAAATTTGGGACGGAGGGAGTACTTG
TTGCAGAGGGAGTCCAGCGATGGTAAACTGAACATCATATCTCTGCTTGTTCTTCACAGT
GGTGGTTCCATATCCATAGAAGCCGCTCAAGAGGCGATACAAGAGTCTTTAAGGTCGTGT
CGGCGAGACCTGCTGAGGGTGGTCGTCAGAGAAGAGCGTCTTGCTCCAAGGCCATGCAAG
GAGGTGTTCTGGAGGTTTTGTAGGACAAGTCACTTTTTCTACTGTCAGACGGACGGATTT
TCCTCGCCCAAGGAAATGCTCAGCGCGATGAATGCGATATTCAGAGAGCCACTCAAACTT
CAGACTGTCAGTCCTCCTTTGGCTGCTCAATCAGTAAAGTAATCAAGGATTGCTTATAGT
ATTGTCCTGAATCCTGATCATATATGGATAGATGACAAGTAGATATATCCTCCAAGTGCT
ATATGTGGTGTTGGCCAGTGCGTTTCAGGGTTTTACCTAGTCTTCTTATCGCGAATATGC
ACATCATGATCAAGTAGACACAGGTGTGCAGGGCAAGGGATCACTGAAACATAAGACGGA
TGATACACTGTTTGCTTCCAGCTCTGGAGCCCAGCCATGAACACGCCACAGAGAAGGTTG
GACAAACACAATCCACTAATCCGGCGTTTTTATTCCACGACAAGAGAAGAGATTCAGTCG
AGCATCACACAATCCGGCTACAAATACCTCAATCTAGAGCTACTCGAACTTGTAGTGCTT
GTCGACGGCCTCGGTGACGTCCCAGGTGCAGCTCATCCCCTTGGGGAACACCACCAGGTC
CCCGGCAGCGATCTCCACGAACCCCTCCTCGCCGTCCGGGTACACCTTCACCTTCCCCTG
CAGCAGGTAGCATGTCTCCTTGGCCGAGTAGGTCCACGGGAACTTGCTCTTCTCGCACCC
CCACCTGCGGCCAGCCGCCATCGCATCACCGTCGATGCCCATGCCCCGACAGGAAAAGAA
AGAAAGATCTACTAAGCGGAAGCGATCGGGCGGGGCTTACTTGGGCCAC