| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_369102
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_51389 |
1 |
905 bp |
MLOC_51389.1 |
Available |
Available |
LOC_Os08g31680.1, FRAME:+3, EVALUE:2e-20, 13108.m03285 protein retrotransposon protein, putative, unclassified |
| MLOC_51390 |
2 |
1968 bp |
MLOC_51390.1 |
Available |
Available |
LOC_Os11g05730.1, FRAME:-1, EVALUE:1e-15, 13111.m00557 protein histone H3, putative, expressed |
CDS Structure of MLOC_51389
CDS Structure of MLOC_51390
Contig Sequence (3897 bp)
>contig_369102 3897 assembly3_WGSMorex_rbca.fasta
GCGCGAGGCGGAGTCGGGCGTGATGAAGTTAGGTTTTTTTTTCAACCAAACCGCCAACGT
GTGGGTGACATGGCGGGCATACGACGGGCGGGCGGACGGCGCGACATATACGGTACAGAA
CGTGCAATGACCATACTGCCCTTATACGTTTAGGGGGGAGGTTGTACCGAAGGAGACCTC
GTTTCAATAACGTGCTCAAGGGTGCCCGTTCATTACCGGTGACTGCTATCTCTAAAGTTC
TTCACGAAGATCGGAACCGAGGATATAAAGTGTGCATCCAGTTAGGGAAAGCCATATTCC
CATGTTTTGGCATGATAGATGGTCGCTGGGGAGCGCTCCTAAGGATATTGCCCCATTCTT
TTTTCTGGTAGCTTCGAGGAAGAATTTGTCGGTTGCGGATGCGCTGTGTGATGGCAGATG
GTTGAGTGGTTTACACAGGATTAGCTCTGAGGCTGATCTGTACCGGCACATTCAGTTTTT
TTAGAAAAGGACACATTCAGTTTTGGAGGGCCACTCAGAAACTCCAGCTCACTGATACTC
TTGATGCTATTATGTGTCTGCTGCCTCTAATGGATGTACACTGTGAAGTCTGCTTATGAT
TTTCAGTTTGTCACCAGAATTCCCTTGCCACACTTAGACAGTTCTTGGAAGATCAAGGTT
GAGCCAAAAATCCAATTCTTCATTTGCATTTTGCTGCAAAACATGATACTGACTGCTGAC
CGCTTGCTGGCTAGAAACTGGAAGAGTATTGGCAAATGTTGCCTCTGTGACCAGGAGGAG
TGTGCGAGCCACTTAATCCTCTCTTCCTCGTATAGTAAACAGATCTGGTATTCCTTCAGG
GCCTCCTATCCTGGAGCTGAGGCTGTTCTGGCCAGTCACCTTGTACAGTTTTCTCCCCTT
CTTAATGCAAAAGCAGAGAACCTGTCGTTTCTAGTCCAAAAAAAAAACTCATGCTTTAAT
TCACTCTGTAATATTTTTTTAGTAGCTCATGGACTTTCTGTGAGTTATAGCACAAGAAAA
AGGAATTGTGGTCCGAAATGGCGATGTTGCGAGCTAGGAGGTTAAAATGAGCTGTGTGTA
TTAACTTCCGGCACTACCTAGAGTTATTTACCCAAAACCACCACACTTGGGGATAGCTTC
ATTGGTGAAATATCAATTTCAGATACTTCACACGGCCAGGTACCACACCACCTGAGCTTG
ATTATGTGCATATGAAACCTGTAACAAATCATTGAAAGAGACCCAGCTCTGTAAATGTGG
CTATGGAAGATAACATAACACAGTTTACATATCAATTGCACTGCAAACACCAGAGGTTAG
GCCGATATTGAGCCAGTAGTGTGAAGATTGCCCTAAAACTGAATGCAGTAACAACCAAAT
GTACAGAGAGCAGAATTCAAAATATGTCACTTCATCTTCAGCTAGCTAGCTAACCCAAGC
ATGTACTTAAGCATTATGATATGACACACCAAATTCTAAAAAGACAACACTTACTCAATG
TAATTTAAGCTGCTCCAAGTGGATGCCATTTATGCATGAAATGGTCCACGTGCTTTTTCA
TGCCAATTAAGATCCATTCACCATCACTAAGTGGTACTATCTCCGTTCCTAAATATAAGT
CTTTTTTGCAGTTTTCAATTTAATTATATGTCTATTGAAGTGAGAGGAGCAGGAATTCAA
ACCCATTAGTTCTTAATTCATTAGTCTAGCAAGCATCACACTAAGAACCTTATATTAAGC
ATTATTCTACCCCCTCCGTCCCAAAATAAGTGACTCAATTTTGTATTAAAGTTAACGCAA
AGTTGAGTCGTTTTTTAGGCACCTATTTTGGGACGGAGGGAGTATAATTTAAGGCCATAT
TATGATAAAATAATTTAACAGTCTCCCACTTGGCCATTGTGAATGCATGAGGCAATGTTT
TTAACAGAGGTCCCAATTGGTTAACAAAACAGAGCACCAGGTTATGTTGATTGCTATGCT
GATTTCTAAATTTAGATCTCATTAATATATTTTCTATATTTAAATGATGGTTAAATATTT
CGGTGTGATTACAAAATGTGCATATTGCAAGTGATCATATGCTACTTTTCATAAAGTGGT
GAACTGGGATTCCAAATGTAATAGATTAAGTTCCTAAATTTTGAGTTTTTGATGATCAGC
AAACTAATAAGGGCCTCTATTTTCATGCATGTGAGGATAACGGTACTAGTAACTTCTCAA
GATAATCTCCAATCTTTATTGGTGAGTTGCATTACATACTGCATCTCACCTACCAACTTT
GATTCTATGCTACGCAAAACCGCCTAATATATATCTATAGAACTGCTAGTGCAAGAAAAG
TGATTGTCGACGCAGTAGTCGGTATAAAAGGCAAAGCTCATATGTGTTAGAGAAAAGTTG
CTTTCACCTTGGTTGAAATTCGAGGAAATATTCCCTCTCTCCGTTGCCACATTTGTCCGG
AGATGGTTCCAGCACAGTAGGAATCCCCCTCTCATTTCTCATATGAAGACCAACACTACA
ACTGGAGGTACAAACACAAAAGGATCCTAGTCTAACCAAGTGAAAACTAGCCAATACCAT
ACCCAGGACACATATCCATGCAATGCTAGTAAAGTTATGAACATGCAATGGTTTCTTAAA
CTCCCATAGATGCCTGAACTGAAAGAGAATTGATTGTCCACCTAGCTAATATCTCTATAG
AACTGCTAGTGCAAAAAAGTGCCTGTCGAACAACAGTCAGCATAAAAGGCAAATCTCATG
ACTGTCAGACGAAAGTGGCCTTCACCTTTGTGAAATCCGAGGAAATGTTCCCCTGCTCGG
TGCCGCATTTGCCCCGGCGATGGTTTCAGTAGAGCAGGAATCCCCCTTTCATCTCCTTCT
CTTCCTGCCCGTACGCTCTTTTGTTCTTTGCTTCTCCCAGGTAAAAGATGGACACTGTCG
GTTGGTCTTGCAAATTGTCTAGTGCTTGCTGCTTGCAAGGTGTCCTAAAATTCCTGATAG
AATAGCGCACTCTGCAGCCGCACACAGATGTCTTCATTGGTGAATGGTGAATTATCAATT
TCAGATACTTCACACAACCAGATACCACACGGCCTGAGCTTGAATTGTGCATGTTAAACC
TGTTACCTGTAAGAAATCATTGAAAGATGCCCAACTCTGTTAATGGCTATGGAAGACAAC
ACAACATAATTGACATATCAATAGCACTGCAAAGCACCAGGGGTCAGGCAGATATTGAGT
TATCAGTAGTGCCTAAACCTGAATGTAGGAAGGACCAAATGTACAGAGGGCAGAACTCAA
GATCTATCGCTTCATCGCATTGAGCGAAAAGCTCAGACGCGTTCATCAAATCACATCGCT
AACCCAGACATAATTCGAAATCACTTCTAACAGAGCCAAAAGCTCAGATGCGTTCATCAA
AACATTGTACAGGCATGGGGAAATTTGGTGCAGAAACACTGAACCACACAGCTAGCAAAC
AAAAATAACAGGGCACACAGGCAAACCCACAAAATCAAGACACTGGATCATGCATTGTTC
AACCCCCATCACTGCATAACCGTGCTAAGTTTTGCAACTACGACACTGAAAAATCACAAA
GCAATCAAGCAGCAAACAGAGGCATCACATGATAACTGAACTTTTCATTGCCATTTCATT
CCAGCATCGGGACAGACAAGAGGACACATCATATCAACACCAGCCAACAGAAGAACCCGG
CAAAGATCCGGATCGTCAGCCGGTAACAACAACCACCTAGCATCACCGGCGGCGACCGAG
AACCTAGGCGCGCTCCCCGCGGATGCGTCGGGCGAGCTGGATGTCCTTGGGCATGATGGT
GACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGCCCCACGAGGTA
