Contig Data
morexGenes
Links



Map Locations of contig_36905 (5118 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_36905

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51368 2 3066 bp MLOC_51368.1 Available Available LOC_Os09g09980.1, FRAME:+3, EVALUE:0.0, 13109.m00870 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed





CDS Structure of MLOC_51368






Contig Sequence (5118 bp)

>contig_36905 5118 assembly3_WGSMorex_rbca.fasta
TCGAGCGTTGTCTCGGGAATTACCGAGTGCCCAGCCCAAGCGCCGCGCGCGGATCGAACG
GCTACGCATGTAGATCAGACGGCTATCAAGGTGGATGATATTTTCTAAACATCATCCGGT
GGATGCGTAGCAGCCGTCCACTCAATCACCTACCATGTGTATTGCATATTTGATACTAAT
AAACATTACCTGTAAACTATTGAGTCAGTTTCACATGATTTATATCTATCATAATTTCAA
AATCAGATAAGATGTTCTATATTTAAAGATGAGGGTGAGTATGTTGTTGGAACTTGGAAG
TGCCTTTGAAATACGAATGATAACTCCATACTTGGTCAAGGTGGATTCCATATTTGTATG
GAAGGGTATACCCATATATGCGTAGTCAAAAATATGGTATGTATATCTTTTTAAGTCGTT
GGGGTTGATGTGAACCCTAGATTTAGTCTGATGACATGCTTGTTAATCGCCATTATCCTG
TTTGAAGACTATCCATGCTTGGCATATTACATTGCACAATACCACACTGTGATTAAATTC
TGCTTTAGGCTATGAAATCGCGGGAACAATTTTACTCAACTTTCTGTTAATAATCCCTAT
CTGCTGCTACAGTACCAACAGTGACAAAATCATCAGAAATTCAACTTGGAGTGCCTTCAA
GTAATTTGGATTGTCCAATTCCTGTCATTGGATGCTCTTTGTTTTTCACTGATCACAGAT
TTGGATTCAGAAGATTTGCTAATTTAGGTTTGTAATGTTTGCACTGAAGTTATGATGGTG
TCGTAGCTAAAAACTTTGATGTGTGATAGTCTCTGTGTTTTAATTTGCCAAATTTCATGT
ACAATAATAAATAAGGTCTGTGTAGTCTTGGACGACGTCATTTATCCTTTCATCCATTTA
CGGGGACATGACTTTTCAGTTTTTTACTAGTTCAGACTTATTTACTGCATTGAAAAATAA
CGCTTTGCGAATTTGATACAGATATATTGCAGTGGGAAATGAGCCATTTCTGACAAGCTA
CCAGGGCCAGTTTCTGTCATACGTTATTCCAGCAATGGCGAATATTCAGCAATCACTGGT
GAAGGCTAATCTTGCTAGCTACGTGAAGCTAGTAGTCCCGTGCAACGCCGACGCATATGA
GGGCACCGTTCCGTCGCAAGGAGCGTTCAGGACTGAATTGACTCAGATAATGACCCAGCT
TGCAGCATATCTAAGTTCCAACGGAGCTCCATTCGTGGTCAATATCTACCCGTTCCTCAG
TCTTTACCAGAATTCCGACTTCCCAGAAGATTATGCCTTCTTTGAGGGATCAACTCATCC
ACTTGTAGATGGCTCCAACGTGTATTACAATGCTTTTGACGGCAATTTCGACACGTTGAT
TTCTGCTCTGGGTAAAATCGGCTACGGGCAACTACCCATTGCAATTGGCGAGGTGGGTTG
GCCGACTCAGGGAGCACCAAGTGCAAACTTGACTGCAGCAAGGGCGTTCAACCAAGGACT
CATCAACCGTATCATGAGCAACAAAGGGACTCCCCTCCGCCCTGGTGTTCCTCCGGCTGA
TGTCTATCTTTTCGGCCTTCTTGATGAGGAGCAGAAGAGTGTGCTACCAGGAAACTTCGA
GCGACACTGGGGGATCTTCTCATTTGATGGACAGGCCAAGTACCCGTTAAACCTTGGGTT
AGGCAACCCAGTGCTGAAGAATGCTAAAGAGGTGCCGTATCTTCCGTCGCGGTGGTGCGT
CGTGAACCCGGCTCAGAGCCTTGACAAGGCGTCAACTCACCTGAAGCTTGCTTGCGACAT
GGCGGATTGCACCACTCTCTACTACGGAGGGTCGTGCAACGGCATCGGAGAGAAGGGCAA
CGTTTCCTTTGCTTTCAACAGCTACTATCAGATGCAGAAGCAGGATGCCAAGAGCTGTGA
CTTTGATGGGCATGGGCTAATAACTTTCCTTGATCCATCTATGGGTGAATGCCACTTTCT
TGTTGGCATTGATGATAGCAAGAGCTCTGCGGCTGCCTCTTGCGGCCATTGCTGCGGGGT
CTTCTGCGGGGTGTCGATTTTTGCTTTGTGGGTGCTCATGTACCTTAGGATGATGGGCTC
TGCCTAGCGTTGGAAATGGTCTGTTGGGGCACGATAGGCGTGCCTTTGTGAAATACTACT
AGCTTGTACGCTTGACTTTTTAGTTCTAGATGACTAGATATGAATCCTAGATTATCGTGA
GATTAGCGAAGAAGACAATTTTAGTCATATATGGAGATTAATTTATTGTTTAAATTTCTA
TCTTCAAGTAGCAATATTAGTTTAGAGGACAAGTTGCGGTGAGCAGTCTTGATTTGATGT
ACCACCTGACCTGAATGAGGCAGTCATTCTGAAGGAACCAAGAGATGTTTATTGCTGGAA
AGTAATAGAGACCATTACATGCTCACACAAGAGCAGGTAAGTCTGGGTACAACATCATTC
CCTCTGGATTTTTTTTTTATTTTCATTTTTTACTTCTGTATCACCGATGAACAAGTCTGT
GCATCCTTCTTTTCAGCCTGCCGATGGGGTTGGAGCGGGTGGGCAGCAGTTGTCACCGCA
GCAGGCGTGGCCGCAGGTCCTCGTGGGATGCTCCACGATCCAGCAGCACTGGCACGCTGA
ATCGAAACGGAGCGCAAGGTGAAGCTCAGCCCAAAAAGAAGCAGCCATGAAGATGATGTG
AGCATGCCAACAGCAGGCAGGAGAGCATGACTGTCTAACAATTAAACAAGGTTAAACAAG
GTTGTGATGAAGAGCGCAAGCAGCATGAGCCAGGACACCAGGCCAAGGAGAGTGTTCCTC
CTCATGCCTCCTTATGCTTCACGGTTGAGGGCTTTCAGGGGATCTACGTACGTGTTTGCA
AACAAGATGTGGGTGTGTATATAGGCGACCGTGTATGGCCTGGCTCGACTTGTGATAAGA
TCCGGCCCAGCCGCTTTGCTTGACTTGGACTGATTCTGGTTGGGATACGCCGACTGCCGG
AGTGTACATGTTGGACTTGAGATGGCAGATGGCAGCCTATGTGCCCCCCGTACCGACTAG
TCATGTTTTTTTTTTTTTTTTGAGAAACGACTAGTCATGTTGTTCGTCCAACGACGCATT
TGGTTCCGTCCAACGACGGCTGTTTTTTTCTGGCCGTCCGGCATTACGGGAACGAAGGTC
GTATACATCTTGACAATGAGTATCTCTGAAACAATGAGTACTAGCAGTATTAGACCTTAC
ATAGCATAGCTTTATCCATAGAGATCTCTTTTCTCATATTGTTGGAATTCATGAATACCG
AGCCTCTTTACAATATCAGCAGGATCTAGTGATTTGTCGAATGAGGAATCAATAGATCTC
AATAATTTCTTCACCATCGCATGGTAGGTGATGTCAATGGCGCCAAGAGCTTGGAGCTAA
TTGGAGATATCAGTGAGGCAATAGAAAGTTTACTGAAAATTTTCGTTGTCGAGTCTTTTG
AAGCGGTTGAAGAGATTGCGAAGAACATCAATCCGAGAGTCACGTTGAGTTGAGATTCCT
TCATTGACTTTTACAGTCTGTTTCAGATGAGCATTGCAGACCCCAAAGCACCCACTCTGT
CATGCTGACCTTTGCTCAGATGGTCACATATGATATTGTTTACTTGGGAGTCAAGTTGCT
TGAATCTCTTCACATCAGCAACATTGATAGAAGGGGTGACAGAGGGAACGCCATTTTTCA
CAACATAAGAGATCATTGTCAATTGCTTCAAGATGCATGCGCATCTTGTTCTTCCATTAG
GGATAGTTCGTCCCTTCGAAGGTAGGACAACCCGGAGAGATCTTGATCATACCTGTAGTC
AACATAACCAAAACTCTAGATGGTTAAACCAAAATCACAGAGAACAAGGAAGTACCTTGC
TCTGATACCAATTGAAAGTACATTATATCAAATAGAGGGGGGGATGAATAGGAAATTTTT
ATAAATTCGTTACTGAGAAATTTGCTAAGTGACGAACTACTAGCAGCGGAATAAGTACTC
AGGTGTAAGCATAATATACCAGTAGCATAATCGTCATGATGAAATGAAACATACAGATAG
CACAAGTGGCATGTAAACATGATAAGCATGTGAAGAACAAGGTGACTGGAGAATTTGAGA
TGAGGAAAATGAGAAAGTCTTCAGTCAAAGTCTTCAAATAATAACGACCAATTTCATCAA
GTACCCGAGGAAATGAAACAGTTGAGGAAATAGAACCAGGAGCTTGATGAAGACAATGGT
TTGATGACCCAGTTTCAACCGTTGTGGCAGTTGTACGTCTAGTTTGGAGCGGCCTGATAT
TAAAACCAAAGGACACACATTTCCAGGATACATAGTCCCGGTACATAGAATCCTTACCGT
ATTCTCCTTGAGCTAAGGTCACATAAACCTCGCCCAACACTCGTGTTAAGTCTCCAGGGA
AGACTTCCCAAAACCCCCTCAATCACCCGACAATCCACAATTTCCTCTTGGTTGCTCTAG
ACCATGACGTCTAACCGTCTGGAAGATACACAGTCTTAAAGGTAACAATCGTCGGTTCAA
CACCTGAACGGTCTCTTTAGTGTTGCTCAATCACTTTGGGTTTTAGGTGTTTGGGTTTTT
GGATTTTGCCTCGCTGATGATTTTCTCTCAAAGTCCTCGGAGGATGGGTTGCTCTCAAAT
GACACTTGTCAAGTTCTCTCTCGGAGCAGCCAACCAACTAGTGGTTATGGGGGGCGTCTA
TTTATAGCCAGGGTGCAACCCAACATGATATGACATAAATGACCCCAATGATATGACCAT
TATGTGGATAAGATCTTAGGAACAGCTGGCGCGAAGCACAACAACGCTCGAAATTTCGAA
CTATGGAAGTCCTCAGATCTATCACGTTCCTCACTTGTAGGCAATTCGCACTAGCAAAAT
CGTAACTCCCCAGTTAGAGCAATTTCCTTAGAGATCAAAAGAGTTATGTCTCTTGTCACT
GAAGAATTTGACTGAACTGCAAGAGATTTCCAAAGGCTTCACTCGAATGATTGATTATGT
GTAGGCTTTGAGATGAGCATCACTTGGAAATTTTTCCTTAGTATTACCTCATCCCCCTTT
AATAGTACGGCGTTCCTA