Contig Data
morexGenes
Links



Map Locations of contig_368878 (5273 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_368878

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51295 2 1578 bp MLOC_51295.2 Available Available LOC_Os11g39990.1, FRAME:+2, EVALUE:0.0, 13111.m03952 protein patatin, putative, expressed





CDS Structure of MLOC_51295






Contig Sequence (5273 bp)

>contig_368878 5273 assembly3_WGSMorex_rbca.fasta
TAGTCCCGCCTCTTTGGTCCCGGTTGGTGAACCGGGACTAAAGCCCTTACGGGCCGGGAC
TATAGGCCATGTCCCCACTAGTGGGTTGATTGTGTGTTTCTCATCAAAAATATAAGACAC
CCTTGTGCCTATCAGAAGGGAAGGTTGGGCTAGAGAGGAAACCACAAATAATCTTCCATG
TAGGGATATTGCCTCATCGCCATGGCCATTGTTATTGGCCTAGGTTTTCCTTGGTCTCAA
GAACCCCACCACCACTCATATTCTTTACAGAGGACCATATGCATAGACATGAGTCGGTGT
TCATAGGTTTGGCGCCATGCAACGCGAACAAGCAGTGACAGAGCTACAACAAGGCTACAT
GGGCCATGGCCCAAACAACCTTGTAGCATTTGCTCCTATTACAACTAACTCATGGCCCCA
AAAAAGCCACTCATGGGCCATTTTGTCCCACCCAGGTTTTTATTGTAATCTTCGCCACTT
CAAACAAGCACGCCCATCCACGGACATCTCGCCGTCCGTGTAGGAAAAGACCAAGACATT
TAGTGAGACTCAGCTTGAGAAAGAGAGGTTGCAAATCGCACGGGACGCGGAGGATGCAAA
GATCATGTTGGTGGACGAAAGCCTCTTGGATGAGCAAGAAGAGAAGTGGCTTGCGAACAA
AAAGAAGAACAATAGTCGTAGGGAGTATGAGGGGGCGAGGACGGCGTCGGCGACAGCGGC
GCATGCGACAAGGATGCATGCGAAGTATGTGGCATGGTTGCACGCCGGAGCAGGACACAA
TGATGGTCTCGGAGTAGGCCACGTGGTTGGACCGGCAAGTGATCTTGTTAGCTAGCCAGC
GACTGATCAGATATCAATTTCATTTTGGCTTGTCCAGATTATTGAACTATGATTTGTTTT
GCTTTGTTTCGAATGATTGAATTCGAATAATTTTATATGGTATGATCGGCGCACATGAAT
TACATGTATTTGGGGTGTGTGGATGTGCGACAATGCATATAAGGGATTGTCTGACGTCAT
CTATGAACGCGCCCGCAGCCGTACATGAAGAGTGGATTTGTCAAGTCCGGTTATAGATGC
TCTAAATCAGGCATGTGTTCTTGGTCTTCAATTGACCAAACGAACATGCGTAACATGCCA
ACGAAAAATTCAGTTAGTATTTTCATTCCACTAAGAATCTCAAGATATGCTTTTTGTGGC
ATACAATATATATTTTTCCAGTTAAATTGTTTGAAAACGAGCCCCCAAAAAGTATACTAA
TATGAATCGTCCGAGAGCATTGAGACGTGTGTGTTCTATTTAACTTGGATGATAGTAACC
AGTGAACGTTCCTTGGGGGGCATGGCATTTGCGAACATTTTTTATTACGAATTCTTCAAA
CACACGTGGCAAATTACGGAAACACGAGTTCGTGTTGTGAAATTTGTCGTGGTCGCTTGA
AAGAATTAACATGTTCCTGCAGTATAAAACACCGTGAAAAATGTTTGCAAATGCCATTCC
CCAGCTCACCCCCGTTTAATTATTATTTTCTTTCAATTCCACTTCTTTGTTTTATTATTG
CAGTCTTGTTAAGTCTCAGTTGATGCTATATCTGTGAGATCTTATATTAAAATTCATGTA
AAATAAATAAATTTTTTACATGTGAGATATTTCTTGGTTAAATCGAGACCTAGCCACACC
CTTGTTATTAAGATGGAATGTGTAACTTCTAAAGAAAATCCGATACGATCAAGCATCGTC
GCTGCTCTTCATTGTGCCAACAAATCATGCTGTCGACCGGTACAGCGAGTAGGGATTCCA
TTCCAGGAGTTGGCCGTCGGTATCCATCAAACGTGACACACGCGCACCATAAAATAAGCG
TGAAGTAAAATGATTCCTTCTTAGCCACTGACGCCATATTTGGAGTTAAATAGCTCGGTA
CCCCGGGTAGAGGTTCCACATCGGAAAGCACAAGAACACAAGAGCCACGATCACGCCCCG
GAAATCTTGACGTACTGGAGCGAGCTGGCCTGGTCTCGTTTCAAATTGAAGGCTCTCCCA
CTGCTAGCAGTAGCTAGAGCTAGAGCAGAGCAGGGCACACCCCGTGCGAGGCTAAACATG
GGCAGCCAGGCGGACACGACGACGACGTGCCCGCCGTCGGCGCAGGGGCGACTCATCACG
GTGCTGAGCATCGACGGGGGCGGCATCCGCGGTCTCATCCCCTCCACCATCCTCGCATGT
CTCGAGTCCAAGCTCCAGGTACGCCCGTCCGCAGCTCGATTGCCAAGCTGCACCTTCGTC
ATCCTTGATTGATTGTTGTTTGTGACGTGTGCTGCGTTTGACAGGAGCTAGACGGGCCGG
ACGCGCGCATCGCGGACTACTTCGACGTGATCGCCGGGACGAGCACGGGCGCGCTGGTCA
CGTCGATGCTGGCGGCGCCGGGCGAGAACAAGCGGCCACTCTTCGAGGCCAAGGACATCA
ACAACTTCTACCTTGAGAACGGGCCCAAGATCTTCCCGCAGAGGAGGTACGTACGCACGC
ACGCACGCACGCACGCACGGTGTCCCTTCTCTTCTCTCCTTCCGGCAATACCGTCGTGTT
GACGCCAGCGTTGCTTCACGTACGTACACAGGTTGGGGTTCCTGACCCCGATAGCGAACC
TGTTCGGCGCGGTGAAGGGTCCCAAGTACGACGGTAAGTTCCTGCACGACAAGATCAAGA
GCCTCACCAACGACGTGACGGTCGCCGACACCGTCACCAACATCATAGTCCCGACGTTCG
ACATCAAGTACCTGCAGCCGGTCATCTTCAACACGTACGAGGCCAAGGTGGACCCGCTCA
AGAACGCGCACCTCTCGGACATCTGCATCAGCACGTCGGCGGCGCCGACCTACTTCCCGG
CGCACTACTTCGCGACCCACGACCCCATGGGCAAGCTGCCGGACCGTGAGTATCACCTGG
TCGACGGTGGCGTGGCCGCCAACAACCCCACTATGGCCGCCATGTCCATGATCACCAAGG
AAGTGTTGCGCCGGAACCCGGACTTCTCGCACGGCAAGCCCGCCGAGTACCACAGGTACC
TCATCATCTCCCTCGGCACAGGGACGGCCAAGCAGGCGGAGAAGTACACCGCGCCGGACT
GCGCCAAGTGGGGCGTCCTCCGCTGGCTCTATGATGGTGGCTTCACCCCACTTATCGACA
TTTTCTCCCATGCAAGCGCCGACATGGTCGACATCCACGCTGCTATATTATTCCAAGCAC
TTCACATTGAGAAGAACTACCTACGCATCCAGGACGACTCACTCACGGGCCACACATCCT
CTGTGGATATCTCCACCAAGGCGAACATGGAGGCGCTCATCGGAATTGGCAACATGTTGC
TCAAGAAGAAAGTGGCTCGGGTGAACATCGACACAGGGATTTACGAGCCCGTTGATGATG
AGGGCACCAACGAAGAGGCGCTCGCTCACTTCGCCCAGAAGCTCTCCGACGAGCGCAAGC
TGCGGCTGAGCCAACCCACCCTCAACTCTCAATAGACAAGAGAACGATTCGAAAGAGAAC
AAAGACAAAGAAAACTAGCTGCTATGCTAGATGGACCGATCTAGAGTTGTAATATATTGT
TATGTAATGTAATGTCTGGTGAGTAATTATTTTTTATCCAACAATATCGTTGTTTAAACT
TTGAAAAATAATATTCTACTCCTACTACCTAAAACGAAGGATGCAAGTTGGATCCAACAA
TATAGGGCAATTCGTCTCATGATTATCAGCTTTAAGATTTGTACGGAGTTGGCGACTAAT
CGGTTGAATGGCATGGTTGACCATGTAGCCCATCTCACTCAATCATCATGCATGCAAGAA
CGAAATATACTTGATAGGGTTGGTTTCCTACATGAAAAAACTATAAATGAGCTTCACCGG
AAAAAAAAACAAGTGCGTCCTAAAAATTGACTTTAACAAAGTTTATGATGAAGTGAAGTG
ACTTACGTCTTCTATGAACTCTTCGCATATATAGGTTCTCATCAAAACGATGCACATGGG
TAAGGGGCGTTGTTCTTGAAATAGTATCGCCATCTAAATAAATGATGACATGGGCAACTA
CTTCCGAAAGGGTCTTCGTCATGGTGTCCCGCTATCCCCTATCATGTTCAACATTGTAGC
GGGTATGCTCTATATACTAGTTGTAAGCACTAAAATGGCCGGACAGATTGGTGGGGAAAT
TTCTCATTAGTATAGAAGATGATCTATCCATTCCATCATATGCAAATAACCTCAAACCTC
AAGTTGCTTTTATTCGCTTCTGAGAAACTTCTCGGTTCGAAATTAATTCTCATCAGAGTG
GATTCTTTTCTTCGAAGAGATCGTGGCGATCTTTAGTTGTTGCCTCGGGCAGTACCCAAT
TAGGTAGATTGGCATTCAAATTCACTATCAAAGACTTGATCAACCTTCTTACTGGAGAAG
GCGTGTGGTAGAAAATCATTTGTTATAAGTACATGAGATTCAAAGTCATATTTCTCAACT
CCGCTCGAAACCAGGGGATCCCTTTTTCTGTTGGCCTGGTGAAACCTAATGAATCCATTT
CTTTCAATTTGATTGTTTCTTTTTGAGGGATGGTTTCCAAGTTAGATTCTGGGAGGATAC
TGATCTCTTGCAAGAGCACAGAGTTTGGTTGTAACTTTTCAAAGTAAGAGTATCAATTCC
CATGAAGAGGTAAGTAAATGGTACGCGTTATTGTAAGTGCATAGAATTTTGCTAGAGGCT
TCTCTTTCATAGAAAGCATACAGTGGGTAAACAAANNNNNNNNNNNNNATTGATAGAAAA
GCACATAGTTATACAATATTTATTCCATATAGGCATCGCCTCCGTAAGCAACTAGACTGG
CTCCTCCTGCATATACTACTATTACACCACCCATCGATCGCTATTGAGCACACAACTAGA
GTATTAAGTGAAAACAGAGTAATGCTTGGAGAACAATGACATGACGTAGACAAAGTAAAT
CCAATTAATATGAACCAACCCCATCGTTATACCCATAGTGACAACAATACAATACGTGCC
ATGTCCATTTCTGTCACCGGGGTTGAGCACCACAAGATGGAACCCACTACAATGCACCTC
TCTCACTCATGATAGATCAATCTAATTGGCCAAACAAAATCAATAGATCATAGAGAATTA
TTAATCTATCACAATCATGCATATAAGAATTCAGAGAAGACTCGAATATTATTCATGAAT
AATCTGAACATAAAACCACAATTCATTCGATCCCAACAAACGCACCGCACAAG