Map Locations of contig_368877 (5536 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_368877

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51294 3 2085 bp AK375226 Available Available None





CDS Structure of MLOC_51294






Contig Sequence (5536 bp)

>contig_368877 5536 assembly3_WGSMorex_rbca.fasta
CCTCTCCTTCTTCCTGTATCGCACAGCCAACGAGCCGCACCTCCTGCACAGCCACGCCGC
GCCTCCCAGATCCACCCCGCCTCGTCGGATGCCTCCCAAATCTGCCGCCACCTCGCCAGA
CGTCGCCGCCGTTTCCTCAGGCCCCACTATCGCTAGCCTTTGATACCATGTAGAAACGGG
AGGGGGACAGGACTACCTCCAGATGGGACAAGCTTTGTCTGGTCGCCCGCGTGTGGTGTT
GTGGATGTATAGCAGCTTGCTCACTCGAAAGGACTGAAAACACCTCCTTCTAGGTCATCT
CAAGGGNNGGGCCTTGTGGGCTTAAGTGAGATGGACCAAACAACTCATACCGATTCTCAA
CAAATTTACTTCCCCATGCTGTGACCAATATCATGGGGATCAGGGCCTGATGGGGAACTG
TAGTAGTCAAGTTGGCAGGCATGCCAAAAATTTGCCAACCATCCAAACAAACAAAATCAC
AAGTTTCAGCTACTCAAAAATGAAATCAGTGCTCTTGTCCATGAGAGGACACCCATCCTT
CACTCGGGGACATAAGGCCGTAGGGCAAAATCAGAGTCACAGAACAATCAGGAAGAAAGT
TGAAGCAAAACCAGATGGGCAGCACAAAATTCAAGCATCTTCAACTCAATCAATATAACG
GCACACTGACGACAAAAGGGCGACTCTGCTCCAGTTACATGAACGGGGGCATTTTACAAC
GCTGCCCACAGCGACAAGACATGGCTGGGCATGCTATTCTAAGAGACTGTTAGAGGCCAC
ATGTTGCCGAGACACGGGTGAAATTTCCTTTTCCTAACCTACTAAAAGATGATGCTGATG
AACTTTGAAGAAGATGGTGATGATCAGTACACGGGCGACCGCAAACAGAACTCTATACTC
AAATTAGTGGCAAAACCAGGCAGGTTCTAGCGCAGGCAGCGGCGTGTCGTGTCATCCTCT
GTGTGCAGTCTCGGCCTTGCTAAGTTGGGCTGGGGAAGCATAAATTTGTACTGTCGTTAG
AGATTATCCACAGCTATCTCATCTTTGACAGGGACCGGCTGGACATTCCATGCAGCAACT
TGACAAACCCAAGGAAGCTGAGCTTCCCATCGGTGTGTCGGATCCAGTCCTGCAGAACGA
CGTGCAGCGGCACGGAGGGACTGAGACCCAGTTCCTGAAACACCAAGTAACACAGGACAT
GCGTGAAGGGATTCCAAATTTATCATTTTAGAAAATGAACATGGACGGGGAGAGAGGTAT
CACATACTGAAGCCAGTTCATCGATTACAATGGCTCGATTGCCATCCTTCTCGAAAATTT
CATAAGCGGATCTCGCATGTTGCTCCCATCTGTCTAATGCTTCAAGCTGGTGAACACTTA
CCGCAGCCGCACAGAACTCATGGAAGTCCATTCTTCTGTACTGAAGAGCGCTCAACTGGA
AAGATAATTCAGGTATACAGTGAGTCCAGTTTGTGGCGGATGAAAATGCCGGCTTAAGAC
CAACAACACACGTACCGAGACAAGAATCTCCTGAACTCGTGTTTCTTTCATCGCATCAGT
GGCTTCTCTCGTTAAGGCCTAAAGAGGATAAACAGGAAGAGTCAACACCATGGCTTCAAA
ATGAATGGGAGAGAACATTTCAGAGCTCTAAGATGAACAAACCATTCTGATATTATCTAG
GGTGATGCATCCATTTCTATCAGGTTCCAATAAGGAAAACTGTCCTTTGAGATAAAAAAG
CTCATCAACAGTCAAAGTCTTTGACAAAGCCTGTAATGGATCAAGAAAGATACGTCAACG
GCTGCTGCTTGCAAAGAATAGCTTGATACCACCACTTTGAGGTTCAAATAAAGCGACATC
CCCTCTTTATGTTATTTTTAACAGAGAGAATTGCCAAAAAAATATAACTGTCCAAGCATT
TTATTCTGGAACTTATAAAGGTATGGTACAAAGAGTAGGCTCCCGAATATATTTTTTATG
AAAATTGTATGCATGTAATGATATTGATCAGGAGGCTGTTTGAGACATTTGGAATTGAAA
CCAATAACCATCTAAAGAAATACTAGGTTACTGCACAACCATTCAAAGCCCCGGGTAGAA
AATGTTGTAGTATAGAAGCAAGTCCAACTCTGAAGCAGCAGCAGCACATGTCTATGTGGA
ATAACAAGAGAAAATTCAGAACAGGTTTTATCAATGCAGACCTTCAGAGCAGCTTTGCAT
AATGATGAAGAACGAATATAAGCTTTGATAAGACGAAATATAAGGACATCCAGTGGCATC
TTAATGTCATTGTAATTTCTAATCCATGGATGACCTGAAAAACATAATATAAGACAGAGT
TAGCAATGTAAGTTTAAACTGGATCCATATAGACAGATTGAAACTCACCTAAAGCTTGTG
CTGCAGTCATCCTTCTACGTGGATCCTTACACAGCAAGCGCTTAACGAAGTCCATTGCTT
CTGGAGTGAGTGAAGGCCAAGGTGCCTCATTATAACTGGGGTCAGCTTTGAGAACAGAAC
GGAATATGCCAGATTCAGTGCGTGCCCAAAAAGGGCGGCTGCCACAAAGGAGGATATATG
CAATGACACCTATACTCCAGACATCCGCTTCTGTGCTATAGCATCTATGCAGAACTTCCG
GAGCAACATAATAAGCACTTCCAACAATATCATTTAGTCTCTCATCTGCATAAGGTATTA
GAACACTGCATTAAAAAAGTGCTAGTGGATACTATTATCTTCACTGATGGCAAGTACAAA
TCAACAAATTAACAGATATGCACATTGATGAGCAAGAAACTAACCTGGTTTTACAAAATC
TGATAATCCGAAGTCAATCGTCTTAAGTTGAGAGTTCTCATCTTTAGAAGTAAAAAGAAA
ATTCTGAAGAGAAAAAACACAACATTTTAGAAATTTATTGCAATGTCAAATGCAAAAACA
GTAAAAATTAGATCATATTCGCGAGAGAAGAGAAAGGCAATACAATAAATACACATCTAA
GGAACGCCATGAATAAATTATACGTCTTTTGGAACAGTGTAATTTTTTTCTTTCAAAAAG
GAGGTTCGAACATCGGAAGTAGAAACAGGTAACCATAGCCATTACCTTAAAAGACATGGT
ACCAGCAATATTTAAATCATCACTTTCTAATATCTCAAACATGGTAATGATGAGAACTGA
CGAGATGCAGGTAAAACTGAAAAGGCACTTCACCTCTGGTTTGAGATCCCTATGAACCAC
TCCTTGAATGTGGCAAAAAGCAACAACATTCAATATTTGCACCAGGACAGACTTTGCATC
ATCCTCGGAGTACTTTCCACCTCTACTTAAAATGAATGCAAAACATGAGTTTCGTAATAA
ACCATGATGCTGTACAACATAATGTAAGTTTACTTGTAGCATACCTGGAAAGTATTCTAT
CCAGAAGCTCCCCGCCCTCGCACAACCTAAACAACGGGGGTTTTAATTAAATATTTAAAA
AAACTAAACATGGCCGGCATGGCATTTGAAATCCAGAATAGAACATACAAGGATCACCAT
CAGCAGAAGGTATATAAACTAAATATAGATGCCAACAAAAAACGATGCCTAATATAAGGC
ATCATTGAACGACCTGTAGTAATGACATTATCTGGATTTGGCCATATCTGGAAATCCTTT
TTATTGGCGAAATATTTGTTGTCAGGTTTGGGGAATTGGGCGGGAAAATAAAAGAATATC
CAGTTGCACTGCAAGCATATTTAAAACAGTGTGGCTGCCCCAAATGACATCAATGTATGT
TCATTTTCATCATGCATTATCAAGTCATAACTGGTACTCCCTCTGTAAAGAAATATAAGA
GTGTTTTGATCACTAAAATAATGATCTAAATCTCTTATATTTCTTTACAGAGGGAGTACC
AGATTATTTAAACTGTCACTAAATAACCTAAGAACAAGAACTAACCTAAGAACGTGAAAA
GGTAACTAACCATCCTAGACATATGGATGAAATAACATAAAGTTTTTAGGCACACAAGAT
AACACATTATATGCTTCTGAAAGGTAATTATTGCCCCATCAACAATAAGTAGATCAAAAA
ATCTTAATAAAAAGGGACTGTGGAAAAGTATTGAAGTTGGGTTAATAAAATGGAACTGGC
TATTCAGTGAGTTTGTTTTCTATGCTTGTAGTTCAGAGTGTTGATAACGAGGGCTAAAAG
CTACTCTACTCTACTTGACATATTATGCATCCTCATAGTATGTAAAATTGAAGTCAAAAC
ATATTGTGACTATCAAGGTACCGGAACTTACTCCATGACTATGTAGACCTTTTCGTTGTC
CTCATATGCATCATAAAACTGAACCAAGTTCTTGTGTCCAGCCAAAGCCTTCAAAATTTT
CACCTCCCTCCGGACATCCTCTATAGCAATGGATGTTGTCATCTGACAAGAGAGCAGAGC
AACCTCAGATGGTACTAAAAAATTGTACATATGAGGCCTGAGGGACTAAGTTCACGCCTA
GCTGCAACAAAATGAGGACATTTATCCTAGAATAAGGTATTGAAATGTGGTAACCCCCGA
ATAAGAGAGGTTGCAACTATTGAGAGCTTAAGCCAGACCGCACCGTGATGAAGTAGCAAT
ATGCAGAGTAGTTAGGGAATATCGAGTGTGAATTCCATAACAGAAACTGACAGGACTTAC
TCAGATCTCATCATTCAAGTGGGCATATTTAATATTTCATTACTGTGCATGATTTAATAT
GTTACCTAGTACGTGCTATGCAACAATGCTGGACGTAGAAGATCTCGTAATCTATAATAT
TCATACAGGTATACGGCACGCGATAAAATTAGAGGTTCCTTTTACAATGCACAATGTGGA
TCAATAGCATGTCAGTAGATGAACCCATGATGTCAGGAACATCTGTAACAAGGCACATCT
ACTCGTGTAGACAAGAAGGGGCCTCGTTTCCTAAGAAATGAACAGGCATGCATCCAGTTC
TCGAAAACTTTGATTAGATTAGTCAGTGGCTGCTTTCAGGAGAAGATGATTTACCTTTCT
CTGTTCAATAAACATGAAGGACATTTATATAGCATTCATTCATTCAAAGCCACAAAAGGT
CATGAGAGTATGCCTCATTAGCCAGCAGAAATTCACAAATCTAAACTGGCGCGGCATCAA
CTTTCAGGAAACCAGCGAAGGGTCTGCAGAGGTTGCGGGTAGGTCATCAGTACCTTGGCC
TTGGGGATGACCTTGACGGCGACGGCGTCCCCCTTGCGCGCCCCCTTCCTGATTTTGGCG
GCGCAGGTGTAGCCGAAGTGGCCCCTCCCGACCTCGTCCCCGAGGTCGTACTTGGCGGCG
AAGCCCTTGTTGAAGCCGAAGCCCTTGTCGAGGCCCCTCCCGCCGTCGCTGTCGCCCTCC
TCGGGGATCGCCGGGCGCGAGGGCCCGTGCCGCCGCGCGAGCGCCTGGCGGATGTGCTTG
GCGAGCGACGGCGGCGGGAAGGGCAGGCGCAGGAGGCGCCTGGCCGGGGGGTTGGACGCG
GGCGCCGGGGACTTGG