Contig Data
morexGenes
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Map Locations of contig_36883 (5484 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_36883

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51268 3 1856 bp MLOC_51268.3 Available Available LOC_Os02g36600.1, FRAME:+3, EVALUE:1e-170, 13102.m03996 protein aldose 1-epimerase, putative, expressed
MLOC_51267 2 2214 bp MLOC_51267.2 Available Available LOC_Os07g35050.1, FRAME:+3, EVALUE:5e-57, 13107.m03580 protein OsFBX237 - F-box domain containing protein, expressed





CDS Structure of MLOC_51268






CDS Structure of MLOC_51267






Contig Sequence (5484 bp)

>contig_36883 5484 assembly3_WGSMorex_rbca.fasta
CGTTTTTTCTTTCTTGCAACGCCACATTAGACTGGCGTTTGAGTGGGTCTGCAACGTCAT
ATTAGACTGGCGTTTCTATGTGCGTCTGCAACGCCACGGGCTCTGGCGTTTCAAAAAAGA
TCAGATCGTGAAATGGTTTCAACAGTTCGTTCCGGGCAATACTTTCAGATCAAAATCGTG
AAAAAATCCAGTACTTTCGATCTCCTACGGCATTCTCGCAAAGAACCAACATCCGCCGCC
GCCCGTCCCATCCCCTTGCCAAACCCTCGACGAGCCGACCTGTGCCGCCGGCCGGCGACG
GCCCCTGCCGAGGGCGCCGAACTAGAACAGGAAATGCCGCCAGGCGGAGGCGGAGGCGAC
CACGGCTACGGGGAGCCGGCAACCGCCCGCGGAGGCCGGGATGGGGAAGATCCATCCCGT
TCTTCACATCCGGCGTCGTTGCCGTTGCTGCCTGGCCTCGCCGTCACTCCCCTGCCATCT
GAGGTTTGCTCCCGTCCTCCTTCCAACCCTAGATCCCCAAGCTGGTACTGGGAACCTGAA
TCACTGAATGAACTGTTTATACCATTTTTAGAAAGAGAAGAAGAAGAAACAGAAGCATGT
GCAGCAGGAGGAGGAAGTTCCGGCGGCGAGCTTTCCGGAGGACGCTCTCACGGAGATCCT
GTCACGGGTGCCCTGCAGGTCGCTGTGCCGCTTCAAGTGCGTGTCCAAGGAGTGGCTCGC
CCTCTGCTCCTACTCCCGCGTCCGCAGGAGGTCGCCTCAGGCCATGTCCGGCTTCTTCTA
CAAAGACCACGGCTGCCGTTTCCACAATCTGTCCGGAAGAGGTCCTCCCATGGTCGACCC
TGACCTCTCTTTCCTGCGCAGCAGCTATAAACATTTCAGCGTCACGCAATGCAGCACCAG
CCTTCTCCTATGCAAATGCTGGAAAGTTCCCTACCCCAAGCAGCTCGGTTGGAACTCTCT
CCCGAAAGGAAAAACCGAGCAATGCTTCGAATGGCCCGAGGCCGACGAGTTCGACTATGT
TGTCTGCAATCCTGCCACTCGGGAGTGGACTTTGTTGCCTCCTATGGAATTGCCCGAACA
CCTCCCGCTTTTCCGCGCAGGCAAATATTTCTTAGGTTTTGACGCGGCCATTCCTTCCCG
CTTCGTCGTGTTTGTGCCCCTGAACTCATCTCAGACATATGGCCTGTCTGCGGACATGAT
CTACTCATCGGATACTGGAAGATGGACTTTCACACAGTGCAATTATTTCAGTACATATTC
AATTAGTTATCTAGAAAGCACCTTCCTGAATAACACTATGCATTTCCCTACTCGTTATTC
GGCAATAGTCACAGTGGATATGGAAAGGAAAGATTGGAGGAAAATTAGAATGCCACGTGG
CATGACAAATAAACATGGTGATGTTTCCATTGGGAAGTCCCAGGGACGCTTGTTTGCCTG
GCATATAAAGAATCAAGGTGATTACCGACTCTCCATTTGGGTTCTTGAAAATGATGACAG
CGGAAAGTGGACCCTAAAGTGTACTGTTTGCTGTTCCAAACTGTTTGGAAGGGATTGTCG
CAAAAATTACGAGTCCTACTCGATGTTCGCAATTCATCCAGAACGTAATTTGATTTTTCT
TACTGACACTAAGGACAAGACATTGTCATATGATATGGATAATCAGGAAGTGCATATTAT
CTGTGCTACTGGAGATTTCTTGGAAGGTCTACCTTACACCCCCTCCTTTGCGGAATGGAC
ATCAGATGGTCACTAAAGGCTTGCAATACTTAGCATGACTCTAGTGTCTTAGTAAACATC
AATTGTTGGATTAGTCTTATGTAGTCATGAAGAATTTGTAAGTTGTCTATTTGCTTTCAT
GTAATAATTATTGATGTCACTCTTTTAGCTTCTCGTATGGGGACAAATGTGAGATAAAAA
TATATTATCTATGTTTGAAATGTTTATTTTCCTGCAAATATATCTTTAGTATGCTACTTT
CTATCCACCATCTTAAATATTGATTTTCCCTGTTTTTATGCATTAGGAAGATTTATTTGT
TATGTCCTTCTGGATTGGCTTTTCAACTCATGCTACAGCTATAAAGAAGGCTTAGTTTCC
TTTCAAGTATGAAACTTGCATGGTCTTCGATCGATGATATCAAACGATCTGCAGCTTTAC
AAACCTCTAGAGAACTTAGTTCACTACGTCGGTATGTTTGTAGTTAATAGCGGGTTAGTA
CCCTTCAAATTTGTAGCTTATGATTCTAACTCATGCACCTCTAGTGTTTTTTTTTTTTTG
TTTGGATTGAGCTGTATGCACAAACCATTTCATTTCTGTTCTTGAACTCTTGTTAGATTG
TTGTATTTGGATTCTCTGGATCAGCAATGGCGGGGTTCGAAGCTTGACAGTGATGGATGT
TTTCGAAGCCTCAAGCTAAACAGTCCTGGATAGTGCGGCCTCGGCGAAAACCAAATCGAT
TCTGGTGAATAGTTATCAAGATAACCTGCTAACTGAAGTTTTGTGATCAATTTTAGGCAG
CAGTTGAGCAAAGTTATGGGCCGGTAATATCATTAGCTGTCTCAGGTGAGGCATTTTATT
TTTGAATTTCATTCAAAAGTTCCTTTGGTGCCCTCAGGAATAGGAAAACAAGATTCCGGA
GTATGGCTTCATATCCTTCAGCTTTCACATGAAAAGAAACATTTGCCTGAGACTTTCAGG
CGCTAACATGAATGCTTCGAGTCGCTGTCACTTTGTGTTTTAATATAGAAAATCATATAT
TTGCCACTCTCAACATGTAGCTTTGCACAATTGCCAATTTTCATATTAGCTTGGCAGATT
GGCCACACCATTTGTTGACTACTTAATTACTACTCCCTCCGTTCACAAGTATTATAAGCT
GTTAACTTTTTTCTGATTCGGATGCATATAGATGCATTTTAGTGTGTTTGTTCATTCATT
TTATTCTGTATTATGCAGTCCATATTGAAATGTCCAAAACATCTTATATAGCTATATTTG
TGAACGGAGGGAGTAATATTTCATTAGCACTTGCTTAATCCATTTCTTTTTTTTCCTTTT
TCCATTCATTGGCCGGTGAAATGACCGCAGTGCCTCCGTGCTACCCGGCTATATCTACCT
GGTTCGACGAACCGCTCGCTTTGCTCGGGTGGTCGCCGTCGCAGCTCCCTACTCCTCCGG
CCGGCTCATAGCTCACTGAGGCAGCAGGTTTGTTGGTGAAGCTTGCGTGTGCATTGCTGC
CGATGCTCACATGCTTTGCCTGACCGTCTAGCGTATTTATCGGTATTTGGTCGTTCACAT
CCTTTGCCTGTTCCCTCGGTAAATGCCGTAGACGACGCCGTCATTTATCCTGCCCGGCCG
GATCGATATTTGTAAAAGCATGCATGTAGCCTCTGCCAGCCAGTGCCACGTACTGATGTG
GCAAAACGAGAGATATATATGAGCTTCGTCCGTTGGTTCCAATCAGAGTATGGCTGCACG
GCACAGGATATATATGCACCGGAGAAGAGGCTAGCGTGCGGCTAATTTGCGCGTCACGAG
GATCAACACTCAGAACAAGGTGAACACTCGGTGTTGGTGGCGGTCACGCATACCAAGGAT
GGATGTGCCCACTTTATATCTTCTTGCCTTCACGTCCTTATATTACGATCAAGCAGTATT
GGCCCCGTCTTCCAGCTCTTCTTGCTGAGGTGAACACACACACTCTCTCAAGGATAGATA
CACCTTGCGATGAGAATGGCGAGAGCCCTGCTCGTCGTTGTCCTCGCCGCGTGCTTTGTG
GCGCTCGGCCTGCCCGGCGGCGCGGCGGCGGAGAGGAAGATCGTCGGCATCTACGAGCTC
AAGAAGGGAGATTTCTCGATCAAGGTTACCAACTGGGGTGCCACTCTCATGTCCGTAATC
CTCCCCGACTCGAGAGGTAATAACTGATATGAATGACATGCTTGTTTCTCGTCCGTTGCT
TGTGCAACTGATCTGGCATCTCACAGTCCCACTCTTGTTCTCTTGTACTAGGAAACTTGG
GGGATGTGATCCTGGGCTACGACACGGTTGCTGAATATGTGGTAAGATCATCCATAAACG
CCCATGTTTCTATTTCCTAACACAACATGGTTCAGTTCTTCTTCTTTAGCTTTGCTGACA
AAGTCGGTTTCTGCTTTTGCTTTGCATGCATCTCGACCGTGCGTGTTGTGCAGAATGGCA
CCGCCTACTTCGGAGGGCTGATCGGCCGTGTCGCCAACAGGATCGCCAACGCCCGGTTCA
CGCTGGACGGGAAATCCTACCGCTTGTTTCCCAACGATGGCAACAACACGCTACACGGTA
CGTACAGTCCAGTACAAGAGGAAACTTCCCCTCCCCTCCCCTCCTCTCTTCCCATGAGTT
GCGATCGATCATCTTATTTCTGCTCTTGTTCTCCTCTAGGTGGTCACCGGGGATTCGACA
AGGTCGTGTGGACGGTGAAGGAGCACGTCGCCGGTGGCCGCTCCCCGTTCATCACCCTGT
ATTACCATAGCTTCGACGGAGAGCAAGGTCATAAAGAATTTCGAGCAGCCATTGGCACAA
CTCTTGAGCTTGCACCGCCCTTAAGACTCCTAGCTGTGAACATTTGAGCAGGGTTTCCAG
GCGACGTGGACGTGCACGTGACGTACCAGATCACGGGCCGGCACGCGCTGAGCGTGCGCA
TGAACGCGACGGCCCGGAGCAAGGCCACGCCGGTGAACCTCGCGCACCACGCCTACTGGA
ACCTCGGCGGCGACGGCAGCGGCAGCGTCCTCGGCCAGAAGATCCGCCTCTTCGCCTCTC
GGTACACGCCCGTGGACGCCGCGCTCATCCCGACGGGCCGCCTGGCGCCCGTGGCCGGCA
CGCCGTACGACTTCCGCAGGCCGGCGGCCGTGGGCGCGCGCATCGGCGGCCTCCTGAGCC
GTGGCGTCGCCGGGTACGACATCAACTACGTCGTCGACGGCGGCAGGGGCCTGCGGCGGG
TGGCGGCCGTCCGGGACGGCGCGTCCGGCAGGGCGATGGAGCTGTGGGCGGACCAGCCCG
GGGTGCAGTTCTACACGGCCAACGGGCTGAGCGGGGTGAGGGGGAAAGGCGGCAAGGTAT
ACGGCCGCTACGGCGCGCTGTGCCTGGAGACGCAGGGGTTCCCGAACGCCGTCAATGAAC
CGAGCTTCCCGTCGCAGATCGTCCGGCCGGGGAAGGTGTACAGGCATCACATGCTCTTCA
GGTTCTCCTTCTAGTAGTCCAAGCTCGGTCGTTTGTCAGGCAACACAACCGTCGTCTCTT
GTGTTTCTGTACTGTCAGGATTTGATCGGTTCAGCTTCACCCTTCCAAGGGAAGAATAAA
AAGCATGCTGCATGTTCAAGCTGATAGATCCCGTGGATCGTCAAGGCTAGATGTGTTCGG
TAATAGTAATAGATCATTACCTTGTGATGAACTCGATGAGCTCCCTCCGGGCCGTCCATC
GTGAGGCGGTGACGACGGGGGGGA