| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_36877
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_51239 |
2 |
2161 bp |
MLOC_51239.1 |
Available |
Available |
LOC_Os05g26660.1, FRAME:+2, EVALUE:0.0, 13105.m02740 protein NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed |
CDS Structure of MLOC_51239
Contig Sequence (6538 bp)
>contig_36877 6538 assembly3_WGSMorex_rbca.fasta
AGGGTTGGTGAGGATGACAACGACGACCCCCCCTCCCCGGAGGCCCAAACGAGCTCTAGA
TCAGCCCTCCAGAGGAAGAACGAGAGGTGGCGGTGGCTCCATCTCGTGAAACGTGATGAA
AACTTCTCTCTATTTTTTCCCCTCCAATGATGTGATTTTATAGGACTGGAGTTAGGGACG
GAGGAGCCACGTGGGCCCCAAAAGCTATCAGGGCACAACCACGGGGGTCGCGCCGTGTTA
GCTTGTGCCCCCCTGGCAGCAATTCTTCGACAGGTCTTCGCTCCATAAATCCTTATAAAT
GCCGGAAATAATTCACAAAAAGGTTTGTTCGATTCCGGGACTTTTATTTCTGCTCAAAGA
ACAACACAAGGTAGTTCTGCTGAAAACAACGCGAGTCCTGATTAGTCTCATTCAAATCAT
GCAAATTAGAGGTCAAAACCAGAGCAAAAGTGGTTGGAAAAGTAGATACGTTGAAGACGT
ATCAGCCGCCGATTGGGTTGCGAAGCTACCACTCCCAGCCAGTATCAACTTCCGAGTATT
CTCCACCGCCATCCCCAATCGCACCTCCGCCCGTAGAGTGGCCATCGTCGTCTGGTTTTG
CCGCCGTCGACACCGTCACCTAGGTCTATGCAGGAGAGGGAGACAGAGTGAGAGAGGGGG
GGGGGACAAAGGAGAAGGGTCAGTCGTCTTGACCCCGATTGGAATGGCGCGTTCTAACTG
TCGTCTGTCCGACAGAACCCTGATGGGGCAGGCCCCACGTGTCATAACCGCGGTTAAAAT
GTAACGGTTCGACAACTAGGGTTTTTTTGGAACAACCCACCACTTTTGTGATAGTCTTCT
GAAAAAATAAAAAAGATAGTTTTTTGAAGCGATACCCGTAATGTGATTTTTTTTGCTATA
TACTCCACTGAATACGCATCACCTGAAATCGTGAAACAAATCCAGCAATAAATGCGAGCA
CCAGAACTTAAATTCTGATGGACTAAAATACCACAGTCCCGGTATATCGATCCATCTTTA
TACAAAGAGTTATACCTTAATATTTCATACAATCATATTTAAGGTAAAAGAATATTATGC
AAGCGAATTGTTGCCTTAAAAAACGAAACATCAGATTTCCCCCCCGAGACCCAAAGCAAG
GCCATAGACAGAGAAGGAAAATAACCCTAGGCGCTGCTGTACAGCTGGGCCGCCGCAAGC
TACGCCCGTCTCAACTCTTGCCGAAAATATCTCCCCGCTGCTCGCCTGTACCCTCCCCGC
CCTCTTTTACCTCTTTCTTTCTTGTGTCCCAAGCCAAACCTCTCCCATTCCGCCGCTCCC
ACGAGCATCGGGGCCGTCCAATTACCTGGTTCGACGCCGCCGCGCCGTCCGATGGCAAGC
CCCGCGGCGTGCGAACGTGCCAACTGCGACCGAGCGGAAAGGGAAAGCAAAGCGCGGCGC
GAGCTGTACCGCGGCCCTCCTCGCAGATTCGCCCCCGCGATATCTAGTATTTCGAACAGC
GCCCCTGAGGCGCAGCGGGTCATTCGCCGCCCGCGGACCGAGGCGCGATTCGTTCCCTTT
GACGAGGGCCCGAACGCGAAACCGCCGTCCGCGGACCATCGGTTGGCTGGCTCCGCTATA
ATTGGGGAGAGGGAAGGGACGTCTCCCGTCTCGTCTCCCTCGTCCGCCGCCGCGTGTTCG
GAAGCGAGCGAACCCCGCTCCGCTCCTCGCCTTGGTATCCCCACCGCCGCCCCGCTCCCA
CGCAGATCGACGCACACGCAGCGCCAATGTCGTCGGGGGGAGCGTCGCTGGTGCGCCGCG
CCGTCGAGGCCGTGCGCCGCACGCCGCGCTGGCAGAGGAGGCTCGTCTTGCTCACCGTAG
GGTGCGTGCGCCGTCCCCTCTCCCTCTCCCTCTCCCTCTCCCACCGCCTCCTCGTGTTTT
GATCCATTGCTCGCTCGGGTCCGCTTGTTTGATCGATCCGTACGCCGGCGCGACGCGTCG
TCGTCGCTGTGCATTATGCGCGCTAGGCTAGCTGTGCTGTCCGCCCTTCGGTCGTCGGCG
AATTTTGCCACCTTTTGGTACTTGCTAAGGTTTTCTTGATCTGCCAGTTCCGCGGAAAGG
ATCCGAACCGCAGATTTAAGCGGGCTGATTGTTTTGTTTAATCGACGGATTGCTCCCGTC
ATAACCAGCAACTCCATTGCTGCAATATAGATGTTCGCTTTTGCCCTCGGGATTTCATAA
TATTATCTGTAGATCCATTTATACCTTGTTTGCGCTGCAACGCGTCGGTATGCCAAAATT
TTCTTCGATAGTCTGCTCATCTGCTTGGTAAGACAGCAAACAGACCTAATTATCTGTCGT
GCATGTGTTACGTTCGTGAGGGACTAATTATGTTGTAACTTGCAAGATCCCTCCATTTTC
ATCTCCGGCCTGAAATTTCAAGCTGGGTTCATTGAATCGGTTCTTGGCATTCGGAAATTC
TGTTATTTTGAAATAGAAACCTACTGCAACACATTATTTATTTAGTGCTGAAATCACCGA
GGCCAACGCAGACAATATAATGATGTATGTGTACTTTATTATTTTTATAAATGAATTTTG
TAATGCACTGGCCTCACAACTTCGGAGGACAATTCACGCCATCCTGCAGTACACGTACAT
GGTATATAAGGCAATAATGTCTTTACATTTTGTTCGTAAGAAGTGGACTTGGGTATCTAC
AATAACTATGCAATCTTAAATACTGTTGCCCGTGTAGATTCAGTAAGGGGGTAGAATGCT
AAGATTTACCTGAAAATGTGATTTGAATTATGTTGGAGTATAGTATGGTTAGTCTATTTA
TACTACAGTAAACTATGGTTTTAACCAGTTTGATGCTGTAGTGATGTGTTGCACAATCTA
GTTTGTAAGATAATTCGTCCATTTTTACGTGCAAACCAGGGTCACCCCCTATTACTAAAA
TAAGGAATATCTTTACCATAGAAAGTTACTTCTGTAATAGTTATAAAAAGTTAATAATTG
GTAAATGAACTAAATCATTAGCTTATAAGCCACATAAATTAATAAAAGTAGCATTTATTT
GTTTACATTTGTTTAAGAACATCATTTTATATCAGAACCCTTGACACTTTATTTCTTCAA
CCTCATTGCAGAGCTGGCACTTTAAGCTATGCTTGCCAGGATAACCGTGTTCTTCAAATC
AGTGATGGAACGGGGGGCAAGAAAAAAGTGGTTATACTTGGAACTGGTTGGGCAGGTGCA
AGTTTCTTGAGAAATATTGACACTTCTTTGTATGATGTCCATGTGGTATCACCTCGCAAC
TATTTTATGTTCACTCCTCTGTTGCCGAGTGTGACATGTGGCACGGTTGAAGCACGCAGT
ATTGTGGAGCCAATTCGCAATATTGTGAGGAAGGTACTGTTCTGATCGTAATAGTACATT
GGTCTTACATTTCTATTCTGCATCATTTTGTATCTTCCTAGTATTTTCTACTCCCTCCGT
CCCAAAANNNNNNNNNNNNNNNNNNACTAGCTCTAGTACAAAATTGTATTAAGCTTAAGA
CACTTATTTTGGGATGGAGGGAGTACCTTATAGGCAAGTAAAATTGCACCATTTTGACAA
ATACCATTGGTATATATATATATGAAGAGTTGGCATGGTAAATTTGTGTACTATTTTGCA
GAGAGGTGGCGCATTCAGATTCTGGGAAGCAGAGTGCTACAAGATTGATCCAACAAGCAA
GAAGATCCACTGCAAATCAGGTGATGGGACCAATGCTGACGCCAATGGAGACTTTGTCGT
GGATTATGATTACCTTGTTGTAACTGTTGGAGCTAGACCAAATACTTTCAACACCCCAGG
AGTTGTTGAAAATTGCCATTTCCTGAAGGTCAGTATCTGCCTGTGTTATCTGCCATTAGA
TGGATGAATAAAACTAACCTTGATACAAAGTTGTAGTGCTCTATTTAACATACCTTTATT
CATCAACTGAACGCGGTACACTCCAATTGACAATTTTCCCCAATCAAACTGACAAACTAT
GCACTTGTCCCTTTAGTAGGATAGCAGCTTGCATCTATTTGCTGTGTCCTTTCATCATGA
TAACTATGTGTTGTGTGCTGCTGTGTATTACATATGCAACTAGGCTAACTGTGTGTCCTT
GAGTGCAAGTGTTTTATAGGTTACTTTATGTCACAAAGCAGATATATATACATTTTATAC
AATTAGGTGTAATTTGATATATCTATTATCATGTAGGAAGTAGAAGATGCTCAAAAGATC
AGGAAGAGTGTAATGAAATGTTTTGAAAGAGCTGCCCTTCCTAATCTTACTGATGAAGAG
CGGAAGAAGAACGTTCATTTCGTTGTTATTGGTGGTGGCCCAACAGGGGTAGAATTTGCT
GCAGAGTTGCATGACTTTGTCAATGAGGACTTGGCAAAATTGTATCCTGATGTTAAGAAG
TATGTGAATATTTCAGTAATTGAAGCTGGAGACCATATCCTTACGATGTAAGACTCTTGA
GACAACCGAGTAGAAATTTCTTGGCAGCACTAGCACATATATTGCAGATATGGTGATCAT
TTCTTTCTTCATGTTTCATGCAGGTTTGACAAAAGAATCACCCATTTTGCTGAGGATAAG
TTCAAGAGGACAGGCATAGATTTGAAGACAAATTTCAAGGTTGTGAAGGTGTCTGATAAG
ACAATAACCATGAGTAATCCTGCAACTGGAGAGATTGCAGTTCCATACGGCCTCGCTGTT
TGGTCCACTGGAATTGGAACACGTCCCATGATTATGGATTTCATGAAACAAGTTGGTCAG
GTATATCTCGGTCTGCACCCATAACAAATCACATATTTCACTTGTCACATTTAAGATGTT
CAATACATTTTTTGTAGGCAAACAGGCGTGTGCTAGCAACTGATGAGTGGCTTAGGGTTC
AGGGATGTGACAATGTATATGCACTTGGTGACTGTGCAACTATAACTCAAAGAAAAGTGA
TGGTATGTGCGTTAAATCATTTCAAAGTATCATTCTGAGACACTAACAGTCATATAACTC
CTGTTATGACATCATTCTGTTATCTGAACCTGTGTCTAGCTTAATGTAAAGAGCACCTTT
GTACCTTCTACTTTCATTAGATGTGTCTATCTTCTGCTTTGTTTTCCGTCATCTCAGTGG
GTTGTGTCAGCTGCGTTTTATTAATGTACATTACAGGAAGATGTTGATGCAATCTTCCGG
GTAGCAGACAAGGATAATTCTGGCACTCTAACTGTAAAGAAAATAAAAAATGTTCTTGGC
GACATCTATCAAAGGTACCCACAGGTGGAGCTGTATCTTAAAACCAACCAAATGAAGGGC
TTCAATGACCTGCTGAAAGATAAGGAGTCAGAAGAATTGAACATTGAAGAATTCAAAAAA
GCCCTTGCTCAGGTGGACTCGCAAGTCAAGATGCTCCCAGCAACTGCACAGGTAATTCAT
GTGTATTGACTTCATATTGCCCAATATGCAGAGTGGCAAAATAACTTCAGCATTTATGAT
ATGCTAAGCATGTATTTATTGTTGTTCCATTCATCAGGTTGCTGCACAAGAGGGAGCTTA
TCTGGCAGATTGCTTCAACAGGCTGAATACTTGTGAAGAAAATCCTGAAGGCCCTCTAAG
GATCAGGGGAGCAGGGCGTCATCGGTTCAAACCTTTCAGGTATGTTTTCGAACAATGTTC
TTCTATAAGTGGAATTAGTGAGATTACTGTCAACAGTAAACTCTATTCAGCAGTCATGCT
TGCAATTTTTTGCTGTGCAAGGTCAATAAAATGCCAATCTGTTTTTTTTACCATCAAGTA
CTAGTAAAGGTCTATGAATATATGTTTGGCAGTTTAGCTATGTAACTGATCGTCCCAAAT
CAAAGAGTCGCTGATTTGTCTCATTGAAATAGAACAATTCTATTTCTATAGCTATAATTG
ATCATTCCAAATTGCGTATGTACAGGTACAGGCATCTCGGCCAATTTGCTCCGCTGGGTG
GAGAGCAAACCGCTGCGCAACTGCCTGGTGACTGGGTACATGTAGGCCACAGCACTCAAT
GGCTGTGGTATTCTGTCTATGCAAGGTAAGTCTCTCGCTCTTCAGTATGCTTTGTTCCTT
CTCCACTTTCAAGCACTGATTGGATGCTGGTTCTAATGGTCATTTACATTTTACCAAATG
CAGCAAACAATTCAGCTGGCGCACAAGAATGCTAGTTGTAACTGATTGGGGAAGGCGTTT
CCTCTTTGGAAGGGACTCCAGCAGCCTATAAACTGAACAACGGATTGTCTTTTTTTTGCC
ACCTGAAGATCTGTTAGACTCTGATGCTACCTTCATCGTACGGCACCATTTGTTTTGTTC
CACAATTTTGAGAGCTCAGTTTGCTATAGCTTAGCAAGTTTTTGTTCACAAATTTTGTTA
CGATATGCCGAACGACAATTATCCTTTTTAATGTCTTGTCTTAACACACCTGCATCGTTC
AGGTGTTCCTAGTAGAGATGATCAGAGAGTTTTGGGAGCTCATTTGCATCTCATTCAT
