Contig Data
morexGenes
Links



Map Locations of contig_368765 (2545 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_368765

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51237 1 946 bp MLOC_51237.1 Available Available LOC_Os02g38300.2, FRAME:+1, EVALUE:1e-11, 13102.m04213 protein SNF7 domain containing protein, putative, expressed





CDS Structure of MLOC_51237






Contig Sequence (2545 bp)

>contig_368765 2545 assembly3_WGSMorex_rbca.fasta
GGTTTCCAGGCCGCCAGCCTCGGATAACAAGGATGGACGTCATTTTATTCGTTTGATTTC
GTCTGTAGTCGGACCCTGCTTTTCTACATGATGATTGAATGTATTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTAAGCCAATTCCATATACTTATCTCTCCTGTACATG
AACTTGTAATGATATCCATTTTTGCGAAACGACAAGATGCGTTTCTATCCCTGTCGAGGC
ACTCGTGCCAAAATAAAGATATGATCGCATCTTGGGCATTACAAACCATCCTAAATAATT
TCTTAGATGGCAAGACATGAAATATCTTTGATGTCTACATGACAAGAATAGGAGGATTTT
GGGAGCTTACCAATCTGATGTCCTCATCTTTTGTATAGTGCAACCTCTTTCTATCTTCAT
CATCTGTTTTCACATCGATTGTGACTCGTTTTCGCTTGGTCGATGAAGTTGTGATCCTGG
GATCATATGTTGAAGGAAGAGAGTGGTGCTTGGCTGGTTGGCAGCGGCGGCTGCATCACT
AGATACTAGAAACCAAGCTGCCAAGGGGCTGGCGAGGTGAGGTTGGGATGACTTTGGCCT
TGAAGGAAGCTCATGAAACCATTAGGAGGACATTGTTCCATTACAGCTGAAGAAAAAAAT
GTTTGTTATTACAATAGTTAACATAGATGGTTAACATGCCCAGTTCACTCTTCACTGAAG
AAGAAAAAAATGGGGATTTCGGGATTTCCACAAGCATGGTCAGCTGACTCAAATAGATTG
AACCTAAATCACACACAAGGGAATCAATCTTTGTCTTGAACGAATGGATTTACTGAATCA
CCATGAATCTCCAAAATCCATCGAACCCTAGCCAGTTTACTGAAGAAAATCAATCTGGCC
ATGAGCACGAGAAGAAGCACGGGAAGGACTAACCTCATACCTTGCAGCAAGAGCGGGAAT
CGAGGGTGTCGATTTTGGGCTGAGGACGAGTGTGCGCCGCCTTCTCCGCTCGTTCGCACC
GCGCCTCCGCTCCCTAGTCGTGCCCTTCCCTTCTCCCCTTCCCGCTCGTTCTTTCTCCCT
TTCGTGCCCTTCTAATCTCTTGCTCGCGGGATTTTGTTGGGGGCGCGTGGTTTCGAATCG
AGCGAAGCGACATCCCTCCCATCACGTCGCCCGAGCAGTTGCCCCGTCTCTTTTGTCAGG
AAAGAAGCGAGTTCTTCTGCAGTATCCCGTTTTGCTTTGCAAGCCACATGTTTAGTGGAG
GTGGCACTCGGCAGGACGATGTGGCACCTCGGGCACCCGTCCAGCGTGGTCCATTGACCA
TGCCGTAAGTGAATCTCCCACATTAGACATTACAAAGAAACTAGTGGATCATTTAAATAC
TTTATTTGTCATTTTCTACTTTCACTCTACAACAAAAACAACTCGAGTAACCTAACGACC
ACATAAAATTCTTTCCTTTATTATTCAACATCTTTGTTTCACAGAGAAAGAGGGAAGAGC
TGTTGGTAAATGGTAACGGGTCTTCCCCATAAAAACAAGGGGTAACGGGTAATACGAACC
CGATCCTAAATTCTCCCCGGCCCTACCCGTGAACTGTGATGCCGTGACCGCGTCTCCTCC
TGCAGTCCACCTTCCCCTCCCCCTCTTCCTTCTATCCCGCCGCCGTCTACCCCGCCGCCG
GCGAAACCTTGCTCGCGAGGGGTATACACGGGGAGAGAAAGATGGGGAACGTGTTCGTGA
AGAAGCCTAAGATCACGGAGGTTGACAAGGCCATCCTCGCCCTCAAGACACAGCGCCGCA
AGCTCGCGCAGTTCCAGCAGCAGGTCCCCTGCTCCCGCTCTGCCCGATCCGATCATATGT
TTCCATCCCCCCGTTCCTATTATACCATCGAATTGTTGTAGTTTGTATTGTGATCATTGA
GATTCAATTCTTGTAGTTTATCGATCTCCAACTTTGCCCCCCGGACCTAGATAATACCAG
GTTTGGTTTAGGTTAGGTTTTGCATAACGTTGTTTCTATACCTGAACGGGGACAGGCCTT
TTCCACTTTGTTAGTTTTGTTAGGAGGGCCCAGTTCTGATGTGGTTTGTTGTTTGTCATT
TTGGGTTGACAGCAGTGATCCAGATTTAGAATGTTTGGCATTGTCATCAGGAAAAGAGTA
TAGGTTTTGGGTTGGATTATAATGTATTAAGGTGAATGTCTGTGAGAACTGCACATTCAT
GTTAACAAATTAGGATAGTACTTTCCAGAGCATATTGCGAAAACCGGACTGTATTCTAGT
GCATGCTTTGGTGCGCTGCCATTATCTCAGTCTATCAGTGCTAGTGCCATGGGACTCGTT
TGCTAGTGCAAACTAGCAAACTATCTGATTTTGTACTAGCATGTTGTGCGAAGAAATTAT
TTTGCCATCGGGTTTTGATACCTTTAGGTGGGTATAACTTTTAGTGTTGTGATGAACTGT
TCAATTATTCTAACTGAACTGATGAGCGTGTCTTGCATTAGTAAATCACTGGAATGCCAT
TTCTACTTAGAATTAAGATGGTACT