Map Locations of contig_368764 (4893 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_368764

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_51236 5 1701 bp AK375093 Available Available None





CDS Structure of MLOC_51236






Contig Sequence (4893 bp)

>contig_368764 4893 assembly3_WGSMorex_rbca.fasta
AGGCGTCATCGTGGTCTTTTCAGCTCCAACCACGCCCGCAGGCGTCATTGACCTCAACGT
CACGCCGGGGTATAGTGACGCTGGCCAACTGTCCGACGGGACGCAAAGGAAGCAACATCA
GTCGTTCCCTTCGGCGAACATGGCCTCAACCCGCAGGTTGTTCGACGGAATGCCACTGCC
GACGCCGACGTTCGACGACCCTGACTATGCGGCGTTCATGGAGAATGTCATCTTCGAGGG
TCGTGGTGAGGCCTTCCACGTCAACGGCCAAGGGCAAGCTTTTAATCCCGACACGACCCA
AAGCCATGATGGTCAAGGCCACTATGAAGACACTCAATTCTCCAGCCATGATGAAGATCA
GGACGGCCATGTCAACTCTTGGGATGAAGGTGATGACTTGTATTGTGACGATGGGGAACA
AGAGGTTGACATTTTGGCGGAGCAATTGGTTTTTATCAATGAGGTTACGTAAAGGGTCGA
GGCACAAAAGAGGAGGCAAAGCATTCGCATGGGATTTACACCCAAGTGGAGGACAAACTG
ATTTGCAAGAGTTGGATGGAGATAGGCCAAGATCCCATGAAAGGTGACGAGCAAAAAGGA
TCCGTCTTTTGGACTATATTTCACAAGGACTTTCATGAGAGAAGGATGTTTGCCCCCTAC
TAATTTGCATGCGCGTGCGGCTTCAGTTCAATCCAAAAGACATGGGGGTTCATCCAGCAA
GAGTGTAACAAATATTGTGCCATGCTTGAGAGCGTTCAAGCCCGTACCGTGAGTGGCCTA
GGCATTGGTGACTTGGTATGAACCTCTCGTTTTTTGTCATGTGTCCATTCATGTTGGCAT
GCAATTTTATGTTTTCATGTATTTTGTGTCCTTCCATTTTACAAATGTGGCTGCATATTT
GGTTCTATAGGCATTCCAATCTTTGGAAGCCTTCAAGGCTCGACACAAGAACAAGCCATT
TACTCTCACGCATTGTTGGTCGCTCATCAAAGATTGTGCCAAGTTCAAAGACCAATATGC
CGCTCGTAAGAAAAAAGGAGGGAAGGCGGGCATGGCCGACGAGGGAAACTATTGCCACAT
CCTTTTTTTCATATCTTGCATGCACAGCGGACGAGATGCTGCCGAAATGTGGACTCGCGT
TGGACGCACGGCCGACGCATCCACAAATTCAGACTGATACGACTCCATCTCCATTGCCAC
CCATAAATGAACACAAAGCGGACGAAATGGACGTTCGTTTGGGATCGTGCATTAGAGTTG
ACCTAAAAACCATCTATTTAATCTTCTTTGTTATTCATTAGAGTAGTGGATTCTTAAAAA
GCAATTAAACTAAAATTAACATAATTTGTTTGCATGTTATGGTCATAAGTGTGAATAAAA
TTTTGGTTGTTGAGGACACGACCAGCGCGCCTAGATATTGTCAACGAGGCCGAAAGCCAG
CCTAATAGCCCCGACTATGGCGAACGGTCACCTTATTTTTACCACCATGGCCAGCATTTG
CTGAACCTCTCTGTTGACATGTGCCTTTTGGCCGCGTATGTGCATGTTCATAGTCTGTCA
TACTATTTTTAGAGATTCATTTCGTTTTGTATGTAGTTCGTAGTGTAATCTTTATAAAGA
CTTACATTTAGCAATGTCAGTGCACTTGTAGTGATTCTAATCTATATTAATCTTAACCAA
GTATTGTTAACCAAACATTGCTTATAATATCCTAACACGTTTTGCCTATAAAATTGTACT
AAGCGCCAATCATTGAAAGTGCTCTATGAAAACGTCCTAAGAGCAGATCGTGTCTCCAAA
AATTAATTATTGCTAGTAAAGGGATAAATAACTCTTTCCAACTGAAGAAAACAGATCCCA
ACACTGTCTTTTTCTAGCTTGGCAGTTATGACCAGACTTTTCTATGTTTGGCAGCCAGAA
TGAGATTTGCGTCCGAATTGCAGGTCCAAATCATTATCCTCTTTGGCTTGCCTCCTACCT
TTCGGGTGGCCAGCAGGCATCGTTCTCTTCTGTCTGGACAAATCCGCTTCCGTGCGAACC
AGAACGCCTGCAAGCTTCAGAGAACCGGCTAAGGCATTCCTGGCTGTAGAATAATACAGT
AAGGTCTAGAAAAAGTGCATATATTATTGTGAAGAGAAACTAAGGTTAAATGGCCGGTTT
GACGGAGCTTCATAGGATAGAGATACAGTAGAGTAGATTACTCTCAAGGCAGCGGCAACA
GTAGGTAAGCCCAAACTTGCTAGTAATATTTTTCTCAAGTAGATCAATTAGTTAATCTTT
TGTTGCACCCAAAACTTGTGCCTGCATTCTTGGTTCTTGCCGTAAATCCATTGTTCTTTT
TGGAGGGAGGGAGGGAGGGAATGGACCTGGTCCCATTCTGCAGGCTTTGTCTTGCGTGCC
TTTCTCTGAATTCTGAGCTTGAAAAGGTCTCGAGAGCTCACATGGCCCCGCTCGTTCCAT
TCCCCTTTCCCCTCCCTTGACGACCTGCCTCTCCCTCTCTTGTGGTTGTGGGGTTCCTCC
CAGCTGAGCTGGCCACTCGAGACAAGCACGCGGAGGTGATCCAGTCCTCTATCTCCATGT
ATTCATGCGCTTGGTTGGTCCGAGAGACGGAGATGGAGATGGAGATGGAACCTCTGTCTC
GCAGCTGCTGCTCCCATGGCCATGGCCTACGCCTTCCATGTCCGTATCTCTGACTCTGCT
CTGAGGTACTCACCTCACCTGTTGCTCACTATTGAGTTAAATCAATGCTTCAACCTGCCC
GCATCGCGCAGCCCAGCATGGGCAGTTCCCATTCTTAATAACCCCTTCCATAACTGATCG
CACACGGAATAATAATTCTTTTCTTTGAAGCCGCCGCAACTGCCGAGTTGCTTTGATGTT
CGATCAATCGATCATACCAGAAGAAATGGTTAATGGTTATTCAACCATTCACCGCCCCAA
ATTCGCAGTAGTTTATCCAGATTTGGCTTCTGTTCCGGGGTTGAGTTTGCTCAGCTTCCT
CGTCTATCGTCTCTGCAGGTGGATTAACCAACCGGTAGCGGTCCATGGAGATGGAGATGG
AGGAGTCCCACTTCCCGCTCCGGTGGGAGAGCACGGGCGACCAGTGGTGGTACGCCACGC
CCATCGACTGGGCGGCCGCGAGCGGCCACTACGACGTCGTCAGGGAGCTGCTCCACCTGG
ACGCCAATCTCCTCATCAAGCTCACCTCCCTGCGCCGCATCCGCCGCCTCGAGTCCGTCT
GGGACGACGACATGCGCTTCGCCGACGCCGCCGCGAACCGCGCCTCCGTCGCCCGCTGCC
TGCTCCTCGACTGCGAGTCCCGCGCTCGGCCTGGGGGGAACCGGCTCATCCGGGCCGGCT
ACGGCGGCTGGCTGCTCTACACGGCGGCCGCGGCCGGGGACGCGGGCTTTGTGCGGGAGC
TCCTCGGGAGGCAGCCCCTGCTGGTGTTCGGCGAGGGGGAGTACGGCGTGACCGACGTCC
TCTACGCCGCCGCCAGGAGCAGGCGCCCGGAGGTGTTCCGGATGTTGCTCAACGCGGTGC
TCTCTCCGGCTGGGGATTCGGGAGATACCCCTGCTGCTGCTACCAATCGTGGGGGGTACA
TGTTCAGGCGCGAGATGATGAACCGGGCAATGCACGCCGCGGCGAGGGGCGGTGACCTGG
AGATCCTCACGGAGCTCCTGCAGGGTTGCTCCGATGCCGCTGCGTACCAGGACGCGCAGG
GCGCCACCATCTTGCATGCCGCGGCTGCAAGGGGCCAAGTTGAGGTGATTCTGCTTCTGC
TTCTGAATCTTGATGATATCTGACTGCCTCAGTTATATTTTGCCTATAATTGACATGTCG
TTCTTTAGCCATATGTAATAATTGATTTAAGGGGGAATTAAACAGCATTAATCGTCTCGA
AGTGGCGATGAGCAGGGCTAAATCCATTTAACTCTGAGATTAGTTGCTAGCTTGTGAGAC
AATATCACACATTCGAGCGACCACCGAAATCTGAGAAAAATAACGCCTGTTCTGTTTGAC
ATGATTGTTGCTATAAGTTGATCTTGTGAACATTCAACATGCCAGCCAGGTTGTGATTCT
GCCTGTACACAGAAATATATTTTTTGGGTAATCAGTCTTTTGGCGGCGTACTTTAATTAT
TGTAATGGTGCTCACTTTGCTTGGGAGCCGTGGTAATTAGTTCATGATATTTAGTGCTAG
TCTGTACAAGTTTTTAGAAGTACTAACCGTGGGAATTATCATTCTAAAACATATGGTGTC
TCACCGTGGGAACTATCATTATTTTGGTGCAACATCAGGTTCATTGGACTTTTCAGCAAC
TGCTGGACGCAGTACTAACACATTCTTACTGCAGGTTGTGAAGTATCTGATTGTCGCTTT
TGACATCGTCAACTCTGTAGATGAGCAAGGGAATACAGCGTTGCATATAGCAGCATTCCG
AGGTCATTTACCGGTGGTGGAAGCCCTGATGACTGCATCACCATCACTTATATCAGCTAG
AAATGAAGTTGGTGACACGTTCCTCCATATGGCACTTACTGGCTTCAGAACTCTTGGCTT
CCGAAGGCTTGATCGTCAGATGCAGCTCACGAAGCATCTGGTCTCTGGATCAATCATGGA
TGTCAGCGATGTAATCAACGTGCAGAACGACGATGGAAGGACCGTGCTTCATCTGGCAGT
GGTTGGTAATCTGCACTCCAGCCTCGTTGAGCTCCTGATGACCGTGCCATCGATCGACCT
GAACGTCCGTGACAGCAACGGCATGACTCCGCTGGATTTACTGAGGAAGCAGCCGCACAC
TGCATCGTCTGAGATACTCATCAAGGAGCTGATTCTGGCCGGCGGGATCTCGAACTCGAG
GGATCATGAGACGAGGTCCGCCATTGCTTCTCA