| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
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Predicted Genes from contig_36865
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_51173 |
2 |
1110 bp |
None |
Available |
Available |
LOC_Os07g47530.2, FRAME:-1, EVALUE:3e-141, 13107.m05064 protein AAA-type ATPase family protein, putative, expressed |
CDS Structure of MLOC_51173
Contig Sequence (4193 bp)
>contig_36865 4193 assembly3_WGSMorex_rbca.fasta
CTTGGGGAATTATCCCCACCAATCTCCTCAAAAACACTAGTACCAAACAAGGCCTTAGGA
GGCTGTAATCCCCCTTCTTTTCAATACAAAGAAACGCAAGGCTCTTTGCGTTTTCTCGAA
AAAAAACTAATTAATACTTACAGATTGGACTTTTGAAATATTAGCCTTCGTTTTCAGAAT
TTCGACATCACGATCCAATAGCTGTTTCCACTTTGAGAGTTCCAAATCATCCTGTAGCAT
GTATTTAGAGTTATAACTTGGGAGAGAACACTGCCAAGTAGACATCATTGTTGAGTAACA
CAAATGGCATACCTGTGGTGGTTGTATTGTCACTTTACTGGGGAAAAGTTTAGTGACATG
CTTCGCAGTCTTCGCTGCTTCTTTGGTTTTATCATTTGACCGGCCAAAGGTATCCTGGAT
TGGTGTACATTAGATTTGTAACAACAAAAAAGTGTAACAGAGCATTTATGACAGAACCCA
TAGTTTAATTTAATTGATAAAAGGGTCCAGTAAGAAAAATAATACAGGGGACAATATAAT
AAGCAATTTAGATATATATCAGAAATATCCTTTCAGTGTAAGCTGACAATGTGTTGTAGT
GTCATGGAGTCCCTACACTAGCATGGCATAAGTAGGGAAAAACAGCCATCTTTTCTTTTG
CATCTACTCCCTTATTTTCAAATTCGTTTGTTTACCTGTTGGTCATTCCAATAAACCTCC
TAATCTAGTGTAGCAAGTCAACCAGATGAGGTTTGCCATAATATGAATATAAATTATTAC
AGTAATAGAAGAACAAGGTATGGCTTAATGTGAGGAAACTTGAAGTTGCAAGGTACTTCC
AGCAAAAACCAGAAAAGGCACCTGGAACGCAAGGTCGAGTATTGCTGCTTGACCGTATGG
AAACTTCGAAAGGAAAGGAGACCCGTTTAGCTGTATAAACAACATCTTTTTTGTTAGCTA
AAAGAATGAATACTCAAGAAATCGGGTAAAGATTATCTTTAGAGTAAGTACCTTATCTTT
CCGACTGTCTGCCTGGATCTGAGACCCAATAACAAAAACACCTGCTGGAAAAATTTCGAG
CTTGCTCTTTAGACCATGATAAGAGTAAGTGTTTCCACACGCTTTCTCAACGTCCTTCAA
AAATAGGATAAGGGGACCATTCGCACTTTCTTCAGAAACAAACTGCATAAAATCCCAGTA
AGTAATAAGAGAAAATGACAAATACTGATAAAAGTAAGGTTGCAAAGATTGCACAAACCT
CAAATATAACATCAAATGGATGTTTAGCTCTATCTTCCCAGCCTGGACCATCGAGGCACA
AAGAATCAACTGGAAATACAAATAAGCATAAATAAGTTGTTACAAAAATTAACAAATATA
GCAATAAATGGCAAAAATCACTGCATATGATATAAGTTACTAAAAAGTGTGTAAGAACAA
CAGAAGAAGAAAAAGTCACCTGAACAGAAGAAACCATGATCAACCTCACAATTGCCTCCT
AGATCAATGCCCCCAGGAATCGGTTTGTCGAAACTGACTCCGATTTTTGAGGATCCATTT
TCCTCAAAAGGAAGTCGCACTTCACCCTGGGAACCATAATCTGGAGCTCTGCAGATTGTA
TAATTTGACATATAAATTATTAATAGGTGCAATTAAAATATGCATATGGCAACACCAAGA
GAGGTCAATTGCAAACAAAAGTGTGGAATGCTAACATAATAGGTAATAATTCAGAAAAGC
CATATAGCTAGCGATCATTAATAGGTAATAATTCAGAAAATCCATATAGTTAGCGATCAT
TACATATCATCATAGGTCAGACCAACAAGCAGGGACTTAAACCAGCCTGGTTCTTTTATC
CAATATAAGAAACCCTACTGCCATCTACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTT
TTCTAAACATGGATGTATCTAGTCATATTTTAGTATTAGATACTGGCCTCTTAGGAGGAT
GTTCTCCCCCCTCTTTTCAATGCAATGAAACGCAAAGGCTTTTTGCGTTTTCTCGAAAAA
AAGTATTAGATACATCCGTATCTAGATAAATCTTAGACAAGAATTTTGGGACGGAGGTAG
TAAGATAGACTATGCAACTTAAGTACAAAAGATCAATGCAGTACAATATAATACTCTATG
CAATATTTACAGGGAAGTGGAGAAAGGATGATTCTCATGATTATTGCATCAGATCTACTT
CTCCATATAACCCGTTTGGAACGTACGAATTTCATACAAAAGTAAACGTATACTCCGCTG
GATGTGCAGTTTCCTGAAAAATTCAGACAAGAATCCTGAATTGCAAACAGGGCTAAATCC
CGACCAGTTTGACACTGAATCTTGTAAGGAAGCTTATATCTGTTACCAATTACTGGAAAC
TCTCTATAGCAACCCACGTTCATCGTATATCACACAATATGTTTTCCGGCTTTGCACAGC
ACAAATAATTTTCTATCTGTACAGCCTCCTACTCAAAACTGCTATACCATGAAATGTGCT
AAGAATAATCAAGAAAAAAATTACATCAAAAAAACTCCAGCAGCATTCACATATGTGGCA
CAGGAAGCTGAATGTATGCACATTTATAAAACAAAAACTTAAGGTATGGGCCACACCTTT
GTCCCTCGAGGATAAACCTTGTTGACTGCAAAGAACCAATGTATCTCACCCTATCACCTG
AACAAAATATCAGAAGCATTACTACCGCTACATGAGGTGGTTCCATTACACTAACAAAAT
ATTGTAAAAACAAACAGTACAGTCTCCTCATCGTTTATAGTACCACCATACTCAATTCAA
CAGGTACTCTCAACATCTAGACTTAAAAATAGTTGCCAAAAAATAGCAAAGATAATTTAG
TGCTAATAACAGAGTCATGATAGCCTTACCTTTTTTGTATGGCTCTGATTCCTTTGACTT
TGAAGACTGTCCCTGAAAAAAAATGATACTCAGGTGTTGCCATTTGAATCTGAACTAAAG
AAACCTCCCCCGCCCCCTTTTTGCACACAATTCATATGCAACTGTTTAAAGCGGGCATGC
AGTTGCATCAGTGAGTAATTTACAGCAGACATCATTTACATCTCAAGGTGTCAGCTGATT
CATTTATGGTGAAATTAACTAATTCTACATCTTTTTGGATGTATTTATAAACAGCACCAA
TACTGTGAGTTTACTGCAACTTTGCTGTACAGCTTGTTTACAACGTTCAAACTCTGAAAG
AAGAAAACATTTCAACCTTCCAGAAAATACTAGCAGCATTGGACAAAAAGGTAAAATAGA
ATAGTTGAAGCATATATTTCATCTCACAAAAAGAAGACACATATCAGTCATCTCACAAAA
AGAAGACGCATATCAGTCATCTCACAAAAAGAAGACGCATATCAGTCATCTCACAAAAAG
ATAAGGCCTACAATAGAATTGGTTGTCCTTTCTTTAAAACGTGCTATGGTGGCGCTGTTC
AATATATCAGCAGTCCACTGCAAGAGAATAAGCATGGCATGGCTAAGAGGCTTACACTCA
ACAGCAATGATGAATCTACAACGAGCAGCCTAGCATCGAAGTGTTTGGTGAGAGCCTTCA
TCAATGTTTCTTGGTATATCTCAGACCCTACAAAATGTAAAATTGTTTTTAGTAAACACT
TCAAGCATTTAGCATTTACTCCCTCCGTTCCTTAATATAAGGCCCTGTTTGGAAACAAAA
TAGATTATGATAATCTGGATTATGAAGATAGATTGTATAATCTGGTTTATAAAAATAATC
CAAGTGAGCATGTTTGGAGGCAGATTATATAAACTGTAATTCAGGATTTACATTGCATAA
TGACCTGTCTGCCCTCTATTATTTTTTAAAAGAGGGTGGCGGTGGTAGGAATGTAATTAT
CTCCAACTTTACGAGGGTAATGGGTCATTAGCAATCCATNNNNNNNNNNTAGCTGGGGTA
GAGTAGATTATGAGTTTTTAATAATCTGTCCATTGAATTTTTATAATCTACACCATAATC
TGTCCTGTTTGAAGACAGAATAGATTATAAAGGCTGGATTATATAATCTGGCTGGTTCCA
AACAGGGCCTAAGTCTTTCTAGAGATTTTACTACGGACTACATACGGAGCAAAATGAGTG
AATCCACGCTCTAAAGTATGTCTATATACATCCGTATGTAGTTCGTAGTGGAA
