| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_368502
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_51087 |
4 |
2760 bp |
MLOC_51087.1 |
Available |
Available |
LOC_Os05g28010.1, FRAME:-3, EVALUE:8e-82, 13105.m02880 protein TATA-binding protein-associated factor TAFII55 family protein, putative, expressed |
CDS Structure of MLOC_51087
Contig Sequence (5502 bp)
>contig_368502 5502 assembly3_WGSMorex_rbca.fasta
TACGAAGTTATTACGATGTATATAGACATACTTTAGAGTATAAATTCAATCATTTTGCTC
CGTATGTAGACCCTTGGTGAAATCGCTTAAAAGACTTATATTTAGGAACGGAGGGAGTAT
ATGCGCATGCTACCATTGCAGACGTCATAATTTTTCCAAACGAAAAATAAATAAATCTTT
CGGAGTTGTGCCAAAACAAGTGACGGACTTTCTCCGTAAAAATTCAGAGGATAGCACCCA
AAGGATTAAGGATGTCTCATCCAGTTTATTGGTATAAGAGTACTAAAATTCTGTGCAGTT
GAGAGTTGCTTTATTATGTGAGACTGAAGTAACATTTTGTACAAAAAATGACTGACATCT
CAAGTCAAATCAAAGAACAACAACATGCCTATTACACTGACTCATTCTCCACAAAAATGA
ATTTCACTAACACACTTGTGTACAATTTAAAGCACCTGAGAAAAGACTACAAGTTGCCTC
CTTGGACCAACATTAACTAGGGGTTAGTTGATGTACATGCTACAGAGCGGCTACTGAGAG
GATGACACTGCTTTATAAACCAGACAAGGCATCTCTACCATGTCATCCAGATAACACCAG
TCAAGAACAAGAGCAGATGCCATAAATGCCACCAGCAAGATGTGTTACAACTTGCAAGTA
TAACGATACTGCGAACACGATATACCTCTTGATCTTACAAGTACGACCATACTACTCAAT
CTTACAAGTACGACGATACTACTCAAGTTTTGCTTAGAGCTGGGTCTCGATGATCGACGG
GGACTGGTCCAGATCAGGCTGCCTTTGAACACTTGAGCAACTTCTTATCGAAAGATCTGA
CTGTGATAATAACCCCCTGCCCAAAGAAGAAAATTTTGGACCCAATCATACCACATTAGC
TGCTTTAGAACGCAAACGAGGTCTGAGCATGCCACATGATGATACAGGATTTTGCATGTT
TTTAAAACCATCTTTTAACTTAAGCAATATGCTGAAAACAAAACACTTGCATACCCTGAC
ATTTTATGATTTTAGATAACATATCACGAAGAGACAAGGGACTATGCCCACTGAAAAACA
AGATAAAGAAGAAAATGGTACGAACCAGCTCATATATTTATATGAAACTGAACTCACAGG
ACACAATCAGAGCTCTATCAAAGCTAGTGGTTGATCGTGGCAGCAGTACCTCCATCTGCT
TCTCAAAATTCTGAAGATGTCACTCTTCAGTTGCCTGAAATCTGCTTTGCAGAATTCTGA
AGATGTCACTCTTCAGTTGCCTCAAATCTGCTTGCACATGCTCTGGAAGACCTAAAGTAC
CGATCATCTCTCATTCAGTTTGCTGGTGTGAGAGTTCAAACCACTCAGCTGCTCAGTGTT
GCTTTCTGTGCTGCCTTCAAACGAGTGCATTAAGGTCATCTTTACGAGCACAAACTATTC
CCAGTTAATTGAAAACCAGTTCTTGAAAAAACAGAATTTTAATGCGAAACTCGTCATGAG
AAAATGGCAGCAGCATTTAATAGGTCCTAACAAGACAATAAGCACCCCTGCTTGGTAAAA
ATACACGTTATTTAGTCTGAATCGCTAAAATCACTGGTTTGCTTGGCCAACGGCAACTGC
ACTATCTATTCTGGCCCACTTCAGTTCTCCGAGTCATCAGAGTCACTCCTCTCAGGCTCA
GCTTCTTCGGCATTTGCAGCAGGCTCTTGAGCGTCAGGCTTGGGTGCAGGAGCTGGTGCA
GCTTTCTTGCGGTCACCACCTTCACCAGCTCCAGTTACACTAGCATTTTGGTCTACAAAC
AAGTTAAAGAACTTTATACGTTGACAGATTGGCATATAAACGGCGAGGTTTCCTTTCTAT
GATGGTTTGACCAATGAATGCAATGCACTCGTGATACAAAACCTATGACGTCGGTGTCAA
ACTTTTAAAAAGGTTAGGTTTGGAAACATCTATAAGCAATCACTATAACGGCATGCTTAG
AAGATTCATCTCATTATCCTTATCAACAAAGGAACTACATATAGACATAACGGTTTCCAA
AGTAAAGGGCAAGCAGATTATTCATTACGAAGTTGATGAGCCAATGGAAGTGCTAAACCA
CTAACTAAACAGTACAGAAAGAAACAAATTACTCCCATTTATACCATTGCAATAAGGTGA
AACATTTCACATATCCCACGGACCAAAAGGATACTGACAGACACTCCATGCATAATACTT
ATAAGATCCTTCTCAACTCGATGAACAAGCTCTGCCTGCAAAAATGAGTGCATGCAAGGT
TTAGCATACTGACTAACATTATATTTCAATCAACATGGCAAAAAAATATAGCTGAAGGGT
AGTCAATTCACATACATTCAAGTCAGGCTCTCTGCGGTAACGTCGCCTGCGTGCGTCCCT
CATTGGAGGAGTAAGTCCATGCTTGTATTCAACTTCTTCTGGAGCAGGATCAACATCTTC
TCTTACCATTACCATCTGTTCCAGTTTAAAATGATTATAAGGCCTACAAGGTAACGAGAT
ATATACACAAACCTTCACTTTTACCTGACCAATATCAGCAGCTTTAACTAAAAATGAATC
ATCATATGTCTTATATGACTCCACAACAGTTGGGAGATCCAAGAGAGATGCAGGAAAGCT
CTGGTTACCAATCATAAATGTGCCACTTCTTCCATCATCTGTAGGAGGAAAAATGCCATC
AACCAGAAGGCGATAAGGATTAAGTAAAGATCAGTCCTGATAACAAGTACATACTACTGT
AGTAAGTTGTATTCTCAAAAACCAAGAGAAACCATTGTGTTGTACTATTACAGGAAACTA
ACGCATAAACTGAATTGCACATACACAGTGCTAAATCTAAAGTTTGTCATGAATTAATTT
ATCAGCATTTGAAGGATATAACTAGAGGTTGTCTAGTAAGAACCTGGCATGCCACTATCA
AAAAGACTAACCTTTTCAGAATCATATATTTACTGACCCAAGTGTCTATATTGTTGCCAA
TATAGACTGGTTTCATGGTTCTGTACATGGTTCTGTACAAATAAGGCAAGTTAAGCACAA
CTGAGCCAATAAATGCAATCTCAGTAACTTGTGGAAAGGGGAAAAAGAACACAGAAAACA
ATTAAGTGAGATCTTCAAACTGATCTGATCCCATCCGTAGATAAATATCTAGAACTCAGC
AGCGGTTAAGCTACAAAGAAACAACACAGGTGTGGAGTTTTTTGCTCCAGTGATACTTCA
ATTGTCTATTTAATCTGCGAGCAAGCATGCTCATTTGAATTGTGTTAATGAGACAGTTAC
AACAGACTAATCTGCTAACAACACATTCCAACCTGTCAGTGCAAATCTAGGGCATCAAGA
AATACAGTGTTAATCATGGTTCACTTCATTCATTTTGCAGATAGGAGATAGCACAATGAA
GCGTGTAATCGCCGGCCGGCAGGCAATGACCCATTCGCTCCAAACTACCAAGAATACTTA
ACACATACCAATATACCATGATGCAAGTCAGTAGTGCGAGATATCGGATATTGCTAGTGC
AGGGTACCCCAATGCCAGTTAGTAGTTCGTCAAACCGCATGCTAGCATGCTGCCCCGCCA
GCAAACTATCTAACAAATAACCGTCCCTGTTGCAGTGTATTCTCCGAGAAATACCCATGT
CTGTTGCTCCTCAGATCCGCAGTTGTACCACTCTGCAACAATTTCCCGTGGAAACGGGAA
GTAGAATTTGCAGGGCGAAGAAGAAGAGAGGTGGGGGTCACCTGAGAAGGAGAGGTCGAG
GGAGGCGTCCTCGGGGTTGGAGGATGAGCCAGCAGCAGATTCGTTCATAAGACGCTCGAT
GTGCTCCGCCACAGAAGGGGGCACACGGAGGATGAACTGCTCGTCCATGGCAATTACTCC
GTGGGCAATCAAACTCTGTAAAAGATTCCAACACAGGTAAGTTTGAATGATAGCTACCCC
TACCCCTTTGTCTTTCTGTCCTACAAAAGAATTCACATCATCATTTCCAAATAAAATAGT
TCTGTTGTACAGGCATTTCGTTGGTCCTCATTCATTAACATATGTTTCACTTTTCAGATC
ACCCTATTTGGAAGGTCGACGGAACATTGAATGGTTCGGTGACAGCAGTCCTAGAGAATT
TGCAGCCCGTTTTTTGTTAAAGTAGAGTTCCCCTTACTTTTATCCACATGAGAATGAAGT
TACATTACATGGTTTGTTACAATTTACCTTCACATGGTGTGGTGCAAATACATAAATCTA
CATTAATATTTCTCTGCAAAAATGGGTGTCACCTAGCAAGCATTTTTTTTAAGGTCACCC
ACAAGCTCGAGCCCACAAGTGTCCCAAAATTTACAGGGCTTTCCTCGAACTTCAAGTTCT
TTAATACGGTAAGTTTCAAAAGATTTGGAAAGTCACCTACAGTTATCGTGTGTTCCTTGG
ATTTATCTTTCCAACTACCTCAATATGTTTAACTTCATAATAATTCCACCGAACTTAACA
AGTCAAAAGACAAGCAAAAAAATCGAATTATTTCTCTTTTATTGTTATAGCTTGCTTTCC
CACTGCGCCCCTGTAACCCTGTGGTATATACACCTACCTACGGCTATCCATACAAGTCTC
TAGTTATTCTACCTGGTGACAGCTTTGCTGATGCAGAGCTTAATAAAGCGATGGATGCGG
CGTCCTAAAAAAAAAAAGTGGATCCGGCTAACAAATTGGCGCTTACCGGAGTGGCCTCCA
CTAGGTCCGCCGCGCGTGCGCCCACGTCTCTGTGGCGACGACAACGACCGTTTCCGAAGC
GCGAGCCTCTCCTCTCCGGTCGCCGGCAAATCCCCCTCCGGTCTCCGGCGCCTAAGAGTC
CCCGGCCAGCCAGTCCGCGATGGCGTGAGGTCCGGGATGGAGAGGAGGCTTGGAGGGAGG
AATCAGTGCGGTGGTGGAAAAGGATCTCGCCGGCGAGCGTGGCTCCGATTTGGGTGGGGA
TCGATGAAGCACAGCACCGCCACGCCCAACACAGGATGAGCTCTGCTCGTGCGTTTCCTT
TTTTTTTTTTTTTTTGAACGAGCTGCTCGTGCGTTTCCTTTTTCTCCTCTTTTTCTAGAG
CAAAAGTGTTTTCCTTCTTTCTTACCCTACTAGTTGCGGACGCAGCTTCAGTGACTCGGC
TTCACCAAGTCACGGAGAGCCTTACCCCACAATATCTACCATTCATTCACATCCTATGGA
CAGTATTCACTCAAGGCAAAAAAGCACAGCCTTGATAGTTTTCAGCTGTACATGGAGTGA
CTGAATAAATCAGACACAAAAAGTCTGAAACAATCAAAGAAACAAACATTGAACATGTAG
CATAAATAGTCAACCACTTCACATTGATGAATAAACATTCAACTCTGTTACATAATAGGC
CATTTCACTTCTACACTTAGGCCACAAAAGACTATAGTTAGCCATCAAAATACATCCAGA
TAACTATAGTTAACCCCCAAAGTATCATGTAACCAACATCTA
