morexGenes - Barley RNA-seq Database

Contig contig_368469
Source Contig contig_368469
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_368469 (9478 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location
Predicted Genes from contig_368469

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_51073	4	4703 bp	MLOC_51073.3	Available	Available	LOC_Os06g29380.1, FRAME:+1, EVALUE:0.0, 13106.m03034 protein phospholipid-transporting ATPase, putative, expressed
MLOC_51074	1	316 bp	MLOC_51074.1	Available	Available	None
MLOC_51075	1	499 bp	MLOC_51075.1	Available	Available	LOC_Os06g29370.1, FRAME:-3, EVALUE:1e-13, 13106.m03033 protein hypothetical protein
CDS Structure of MLOC_51073

CDS Structure of MLOC_51074

CDS Structure of MLOC_51075

Contig Sequence (9478 bp)

>contig_368469 9478 assembly3_WGSMorex_rbca.fasta
CGCCAGATATGTGTCTTGCGCGGGGACGTTTCTCGGCGGGCGGACGGACGGACGGACAGA
GGAAAGAAAAAAAAGCCGCGCGCGCTGCCTCGCCGCATGGATCAGGGTCCCCCGCGCTGC
CGCCTGGAGCTGGGGTTCCGGGACGCGGGCGCTCAGGGGCGGCGGGGGTTCCGGCCGGTC
ACCGTCGCCGCGCCGCGGCAGGGCGGGATCTCGGAGCTCTGTTGAGGCGTTCCCGTCAGT
TCCTCGTGCGGCTGCCTGGCCTGCTTTTTTTTAGGTAGGTGGGGGCGGTGGAGTCTTTCT
TGGTGGGTGGGAGCGCGCCCCAATTTATTGCGAGGCGTTTCTTGGGTTCTCATCTGAAAT
CCAAGTTCCTCTTGCTCGGTGGGGGAGTCCAGCGATTTCTCCCTGATTCATCCACTGTTT
CTTGAGGGCTGAATCTGAAAATTCAGCTCAACAAGTTTAAGGCCAAGAGTTCAGTAATCT
CGGCAGTAGGCAAGAGAGCTGAGCCTGCTGAGACCTGGGCAGTAGTAGTAGCCTGGTGTG
GCGATCTGGTTCTTGTGTCAAAATGGCACTGGGAAGGAGGAGGAGGAAGCTGGAGAAGCT
GAAGCTGAGTGCATTGTACAGCTTCGCGCTCTGCGCCAAGGGCGCCACCGAAGATCACTC
CAAGATCGGCACCGCGGGGTTCTCCCGGGTCGTCTACGTCAATGACCCAGACAGGCATGA
AGGGGAGGGCTTCAGATACCCCAAAAATGAGGTGTCCACTACAAAGTACTCCTTGGTCAC
CTTCGTGCCCAAGTCGCTCTTTGAGCAGTTCCGGAGGGTGGCCAACTTCTACTTCCTTGT
CTCGGGGATCCTCACGTTGACCCCGCTCGCGCCCTACTCGGCGGTAAGCGCGCTGCTGCC
ATTGTCGGTCGTGATTACGGCGACCATGCTGAAAGAAGGGGTTGAGGATTGGAGGAGGAA
AAAACAGGTACTGTTTCTGTTATCTTCTGTTCAAATCCTACCACAAGTGAATTATATTTA
GTAAACTTTCTTCCGACTCATATGAATAGTATGTTGTGATTCCCAAGAACTTAACATGCC
TGCTCATAATCCAACCTTTCCAATTGTTGCTTTATGAACCGCTTAACAAAGACGTACAGG
GTTTCCTTTTTCTTCATGGTTAGGCGTTCTATTTATTCAGTTGCATTTTGAGATAGCATC
TTGAAAGGATTTTTTTTTTGTATGATAAGACGAAGCAGGCATGAATCTAAACCTATTGGA
GCTTTCTTTCTGGATCATCCAATGAATAAAAAATGTCTTTTTACTACTCCCTCCGTCCCA
AAATTCTTGTCTTAGGTTTGTCTAGAAATGGATGTACCAAAATACTAAAACGTGACTAGA
TACATTTATATCTAGACAAATCTAAGANNNNNATTTTGAGACGGAGGGAGTATTAAACTG
TTAATTTTGAAGTATATAAGATACCACAAATAACTGAAGGTCAGATCACTAGCACAAAAG
AAGTACTCCTACAAGAAGTATGGATACAATGGATGTTGACATAATATGCCATGCTTTGTA
TTTTTAGGGTAATAATATGTGCCACTTAGTTACAACCAAGCTATGAGCTTCCTATCTAAA
CAATGCCATGAACTACGTCACAAATTACTTTTGTCTCAGCACATTAAATTCCCAGTTATT
TCACTTTGCATGAGATCTAGTCATACAATGCCATTGTGAGTCATACTGGATCCGTTCTAT
CCTAGGCAGCTGATAAACTAATTTAGGAAGAATTTATAATCTCGGTTGTAGCACATGGTT
CCGTTGTATCAACTTTTTTTTTTTCTGCGAATAGATAAATGTTCAGTTCTTCTGGATATT
AAGGTAATACCATAGCTAAATTAGTTATGAATTTCCATTCATCGACGCAGTACACACATT
TGTGATGGACTAGTTGCACCAATATTAATCTTTAATTTTGCTGCATTATCTCTATGATTT
AGTTGGTTTGTATGTCTATGTATATTCTCATGCTGTTGATATGCTAAGTTAATATGTGCA
ATTCTTCATTCAGGACATTGAGCTCAACAATCGAATAGTAAAAGTGCATAGAGGGAATGG
CAGTTTTGAAGAGACAAAATGGAAGTATATCAAAATTGGAGATGTGATAAAGGTGGAGAA
GGATAATTTCTTTCCTGCTGACTTGATTCTACTTTCATCTAACTATCCGGATGGAATCTG
CTATGTGGAGACTATGAACCTTGATGGTGAAACAAATTTGAAAATTAAACAAGCTCTTGA
GGTGACATTGGATTTACAAGAGGATGGTAGTTTCACAAGCCTTAGACAAATAATCAAATG
CGAAGATCCGAATGCCAATCTTTATTCTTTTATTGGTACTATGGATTATAAAGGCATGCA
GCATCCTCTGTCACCCCAACAACTCCTTCTTCGGGACTCAAAGCTGCGGAACACTGATTA
CATATATGGGGCTGTCATCTTCACAGGTCATGATACAAAAGTGATGCAAAATGCAACTGA
GCCACCATCTAAAAGAAGCAAGATTGAGAAAAAAATGGATAACATCATTTACCTGCTGCT
ATGTTCTTTACTTGGAATTGCTTTACTTGGTTCAGTCTTTTTTGGTATATGGACTAAAGA
CGATTTAAGGAATGGTGAACCAAAACGGTGGTATCTTCGCCCAGATGATTCGACCGTCTT
CTATGACCCGAAACGAGCACCTCTGGCATCCTTTTGTCATCTGTTGACAGCCTTAATGTT
GTACAACTACTTTATCCCAATTTCTTTGTACATATCCATTGAGATGGTCAAGATCTTACA
GGCTGTATTCATCAACCAGGACATTGAAATGTATGATGAAGAGTCAGATAAGCCAACTCA
TGCTCGAACCTCAAATCTAAACGAGGAACTAGGTCAAGTTGACACAATTCTCTCTGATAA
GACTGGCACATTGACCTGCAACATGATGGAGTTTATCAAGTGTTCGATTGCTGGCACTGC
ATATGGTCAGTCTGTCACAGAAGTTGAGAAAGCTATGGCCCTGAGGAAAGGAGTGCCACT
AGGTGACGAGATAGTAGGTGGAGAGCACAAGGAGAAACAAATCGAGGAGAGTCCTCATGT
CAAAGGTTTTAATTTGAAGGATCCGCGTATAATGGATGGAAATTGGGTACATGAACCTAA
TAAAGATGTCATCAGGGATTTTTTCCGTCTGCTAGCCATCTGCCACACATGCATACCTGA
AGTAGATGAAACTAATAAAGTTACATATGAAGCCGAGTCCCCTGATGAAGCTGCATTTGT
TATTGCAGCAAGAGAATTAGGGTTTGAGTTTTACAAGAGGACACAGACAAGTATAGTTAT
TCGTGAACGCAATCCTAACCAGAACGTTGAAGATTATCAGTATAGGTATGCCAAATTTAT
TTTGTTCATTAAGGAATACTGTTTATTATGTAAATTTGACCTTTAGCATCCTCTTACAGA
AAATATGAGCTCCTAAATGTCTTGGAATTCAGTAGCTCACGAAGACGGATGTCTGTGATA
GTGAAAGAACCGGAGGGAAGGGTATTACTGTTTAGCAAGGGCGCTGATAGGTAAGTACTC
CACATGCTCTAAATATCTGTGTTTTTTCACAATTAACGGGCAAACTTGTATACTGCCTAT
GGCTTATCTGTCTTCTCCATGTGAACAGTGTGATGTTCAGAAGGCTTGCACCAGATGGAA
GAAAATTTGAGGAAGAGACTAAAAAGCACATAAATGAGTATTCTGATTCTGGTCTAAGAA
CGTTGGTTCTTGCATACCGTGTCTTGGATGAGAAAGAGTACCAGAGCTTCGCTGAAAAAT
TCAGGACTGCCAAAATATCTGGAAGTGCCGACAGAGATGAACAAATTGGGGAGGCTGCTG
ACAGCATTGAGCGGGACTTGATTCTTCTTGGTGCTACTGCTGTTGAAGACAAGCTCCAGA
AAGGGGTATGCTTTCTATGAGAAGGCTATGTTTTCCAGACTAATTCATTTTACATTTTGA
ATTGTCATTTTTCATTTGCGTTGATGTGCATTTGTAATCAGGTACCAGAATGCATTGACA
AGCTTGCACAAGCAGGAATTAAGATATGGGTGTTGACGGGTGACAAAATGGAGACAGCTA
TCAATATTGGGTACTTGGTGTATTTTTGCATGGAAATGATCTTTTTAGTACGACTGGATT
CTAGAAGTTCAAGCTGATTTTCTTTTTCTAATTCATGTGCTTCTTCAGCTTTGCATGTAG
CCTACTTAGACAAGGAATGATACAAATAATCATCACCCTGGAAGCACCTGACATCATTGC
ATTGGAGAAAAATGGAGACAAAGATTCCATTGCCAAGGTGAATAAATGCTTAATTGCCTC
TACTGAATCACTGCCTATGTAATTGTTATTTTTAGATGAGTATATTCACAACAATAATTC
GTAAATGTTTACCAAAAAGGAGTTAAGAAAACAGGCATCCAACTTTTACAATCCTACTCT
ATACGATCAAAACTGTAATAGTTACTTTCTCTTTATTGGCTCTTCAGGCATCAAAGCAAA
GTGTTATGGATCAGATAGAGGATGGAATAAAACAAGTCCCAGCCTTGGGTCAGTCCGGCA
TGGAATCTTTTGCGCTGATAATTGATGGTAAATCATTAACTTATGCTTTGGAAGATGATG
TCAAGTTCAAGTTCTTGGATCTTGCTGTCAAGTGTGCATCAGTCATATGCTGCCGATCTT
CACCAAAGCAGAAGGCATTGGTGAGCATTTTTCATTTTTGGAAGTCATATTTATATTTTC
TTTGTAATTTTCCTAGTGTTATTTCCGAGCATAGTTATTAATCTGTCGCAACTATTGCAG
GTTACGAGGCTTGTTAAACATTCACATAAAGTTACCTTAGCAATTGGTGATGGGGCAAAT
GATGTTGGCATGCTTCAGGAAGCTGACATAGGGGTTGGAATTAGTGGTGTTGAAGGGATG
CAGGTTGCTTATTTTGATGCTTTGCAAATTTTGCGAATGTGCTTGTGGTCACTAGAATAT
ATTTTTAACGGTTACTTCTTTCTCTTCACAATGTCTCTCTCAGGCTGTCATGGCAAGTGA
TATTGCCATCGCCCAATTCCGCTTCCTGGAACGGTTGCTTTTGGTGCATGGACATTGGTG
TTACCGACGTATTTCAGTGATGGTATACTTTTATGTTCCTTTGAACAAATAATTCAACTT
TCAAAATTCGAGTTCTATGTTGATATTCTCTTTATGATGCAGATATGCTATTTCTTCTAC
AAGAACGTGACTTTTGGAGTCACCATCTTTCTGTATGAAGCATTTGCATCCTTTTCAGGG
AAGCCAGCTTACAATGATTGGTTCTTGTCACTGTATAATGTATTTTTCACCTCCCTTCCT
GTCATTGCGTTGGGCGTATTTGATCAGGATGTTTCTTCCCGGCTGTGTTTACAGGTACGT
CAATGCCAAACCGTTTGAAAAAGATGCAACCTTTCATGATAGTAGATTGAATTAGGGAAA
GTCCATTTCAAATTCCAAATTCTCATGAAACTACTTCATCTTTCTGAGAAAGTACACTGT
CTACGTCACTCTGCTCCATATAGAAGCTACATATTTATGTTTTGTTTAAGACAGTTCAAA
ATTTTACATGTTCTGTATACTTGGTTCATTTGATTAGGTAAGTTTGATGACTTAATGTAG
TATTTGCTTTTCATGATTCGATAATTTCCTACTTAATCCAGACAGAACTCTTACCCAAAA
GGGCAAAAGGCGTCTCAAGGCTCAAGCCTTCAGTAATCTTATTTGTGCTGTTCTAAGTTC
CTTTTTCACTGTTTTCTTGGACAAATGAAGATACCATTCTATCTTTCATACTGTGCAAAA
TGCAAAAGCTATGCACATTAATTTTAACTTCGTGTAACCTGGCTGTTTTTAAGAAAGTTC
TGTTTACATGTTACTCAAACAGTATCCGGAGCTGTACCAAGAAGGTGTGCAGAATGTATT
ATTCAGCTGGCGTCGAATACTTGGCTGGATGTTTAATGGTGTCGTGAATGCCATCTTAAT
ATTTTTCTTCTGCACCACGGCCCTGAAGGACCAAGCATTTCGTCAGGATGGCCAAGTTGC
AGGCTTGGATGCCCTAGGAGCTGCCATGTACACTTGTGTCGTATGGGTCGTCAACTGCCA
AATGGCCCTCTCAGTGAACTACTTCACCATAATCCAACACATATTCATATGGGGTAGCAT
TGCTGTGTGGTACATCTTCCTCATGGTTTATGGTAGTATAGACCCAAAGTACTCCAAGAC
AGCATACATGGTCTTCATTGAACAGTTGGCCCCAGCGCTATCATATTGGTTGGTGACACT
TTTCGTGGTGACGGCCACACTCGTCCCGTACTTCTGCTATGCCGCAATTCAGATCCGTTT
CTTTCCAATGTTCCATAACAAGATTCAGTGGAAAAGATACTTGGGGAAGGCTGAAGATCC
AGAGGTGGCAAGGCAGTTGTCTTCACGACACCGGTCATCGTCGCACCCAAGGATGGTTGG
GATCTCTGCTCGTCGTGACGGCAAGGCTATGCAAGTTAAAAAGGGAACTGATGTAGAGGT
TGAAGGATAACATTTTCTCAGTAGATTTTGTGTTTTTGTACAGATTATAGAATGCCATCT
CCTGAAAGATGACAGAAAACGGACCGGCTAGGACTTGTGAATATCCTCGGGTTGTTGCTT
CTATGGTTCCATGTAGTTCATCCAGTTCAGAGGATAGAGCTAGATCACAGAATTTCGTAG
ATAGTAGGCCACAAGAAGAAGAAGAGAAGACCTGCTGTAAAGTTCATTTAGCAATTTAAG
GCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCCCCTTCTCTTTTGCTCTTACACCCGT
TTATGCGTGTGCTCTGATGCAGAATTTCACTTTGTTTCATGGCTTTTGCAACATATCTGT
TGTCCCTCTGTTTTACTGTAAGATGATAATGCTATGGTTTAAAATGAGATAATTGCACTG
CATTTCTCAGAAACAGATTCTTTCAGTGCTTAAATGCAACCATCTGATATGAAATTGCTT
GAAGACAACCTCATGATACATTCAAATAATCTTCAGCCTCATAAGTGTGACAACAAATAA
AGAAGTGGTAGGATTTCAAGCACCTCATTTGCATTGATGGCTGGAAATTTCCATGTTAAT
TCGGATGAAAGGAATGCATCTACAAAATCTCTCGCTAATTAAGAGGAAAAAAGATCCTGC
TAGTAATTATTATGATGTTACAATCGTGTATAGCACGAGTAGTATCTTGTTTCTTTATTG
GTCTCTCCTATCATACAGTTATACTAACCTGCAAGCTGCAGCAAAGAGGAGCAGGAGGCT
GAAGCCGATCTATCGTTCACGGCTCAGGCAGCGGCATCGCCGGCGGCGGCTTGGCCTCCT
CCTCGGCCGGCCTGACGGGCCGCCGAGGCGGCTGCCACCACCAGCATCTCCGGCGGCCGG
CGAGCCTGGTGCAGTCGTACCACTCGTCAGGCCCCTGCGCGTGCGCCGCGCACACCCGGC
CGAAGAAGCAGGACAGGGCGGTGAGCAGCAGCACGGCCGCGAGCACCCCGACGAACGGGC
CGACGGAGCCCCGCTGGTGGGCGGCGGCCGCCCCGGACACCTGGTAGTCCGGCAATGGGA
TCGCCGGCGTGGCGGTCGCCATTGCTGAACGGAGACACGGCGGTGGTGTTGGTGGCCGGA
GCTAGCGGCGGCGAGCGCTTGTTGGACTTGGACGGGGTGAGGGAGGGGGGCATGGGTGGA
GTGCAAGGAATGGAATGGGCAAAAGCGTCACTTGCTTTCGAAATTTATATATAGAGGATA
GTGCCATTGGAGAGGATAGGAAAACAATAAAGGCCAGGAAAAAAGAAGGAAAGGGTTGAG
GGGTAGCTTTGTGGAAGATTTAAGTGGACGCCAACATGGAAAGAATGGAGAAGAAAGCAG
AGCCAATCATGGGGTCCATGTCATGTATCCTCCTACAACCTTACGACGTCTAAGCTTTAT
GGAATACTGGCATTTCGTTAATGGCTAAAATGTTCTTAGTGGAAGGGTTGCCGCAAAACC
GCAATAAGTGGGTGAGTGTTGTTAAAGACTGTGTTTGTTCCTCTTCCTTGAAACGATTTT
CACGAACCTCGAGATGCCAAAAGAATCGACTTATCAAGTTGAGGCATTTCGATTTGGATT
TCAAAAGACTTTGCACCGTACTTTTGCGTATTTTAGATACACTCGTTTCAACGATAGTTA
ATTCCGGACGAAGGGAGTATGTTGGATGGTGTACGTGTCCGCCGAAAAAAGAGAAAGGAA
CTGTTCTCTTCTGGTGCTGATCTGATCATCTAATGATTTGTGGAGCATGCCGGGAAGAAC
CTCTTTGGATGACCATGGATCAACCGAAAAACTAAAGGGAAAAGGAGGCCGATCACTAGT
TTATTTCTAGTTAAGAGTTGAAGCTGCTTTGCTTGTAAACGTTGCCATTCTTGACCCTTC
CAAAGCACTGCTTTCCACAGACAGAATTTAAGCTAATGACATCATCTTCAGATATGGATC
ATCGATGAGTGACAATGTTTCTTTGTTGGTTTGTCGCGGCTGATTGTACCTGATGAGTCA
ACAATGTTTTTTGTCTATTTTGCTCAGCCTGGAAGACGCAATGGTACCTATTTGTCTGAT
TGGCAGGGTAGGGGCGCTGCCTGCACGATCGGCATCTTTTAAGCTTTCTCGCCATGGATG
GGGGTTTGAGGTATCCTAAGGATTAAAGCTGACTCAGAGAGGTCATCAATGTTGATTGCT
TAACGGGCAAGGTTACTCGCCTTTGTCCAGCTCCTCAGGTTCTACCTCATTTCCCAACTT
ACAGTGCTGTACCTGTACGTCAGCTTTACAAAGTAGCACTCATCATGCACTAACATGTTT
GCATCCTCATGCACTAAATCGAATTCATATTTCTTATAAGTCGTAATACAAAAATGTATC
CCAGTCAGCAAGAGGGACTGTGGTATGATCGTGGGAGAAGAAGCCCTTGCTCCAACCCCA
ACAAATGTCCTTTCTACAGCTATGAAGACCAATCACAGTCTTACCAAATTTATTGTTTGT
AAAATATGATCTCACATGGAAGATTATATGTCCAAAGGTTATGCCATGGAGTAAATAAAT
ATATACTCCCCCGTTTTTAAATATAAATCCTTTTACAGATTTTATTAGGGACTACATACG
AAGCAAAATGAATAAATCTATACTTTAAAGTATTCTATATACTACATCCGTATAGTTTTC
TAGTTAAATTTCTAAAAAGACTTATATTTAAAAACGAAGGAATGAATATCCCATCAACCA
TTTTCTACATGCACTGGCGGAGCTTAGGCCCTGTTTGGTTCCAAATAAGTCACCAACTTA
TAAGTTAAAAAGTGCAAAAGGTGACTTATTTTGCCAAACAGGTCCAACTTATAAGTCA