morexGenes - Barley RNA-seq Database

Contig contig_368371
Source Contig contig_368371
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_368371 (7868 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location
Predicted Genes from contig_368371

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_51051	1	159 bp	MLOC_51051.1	Available	Available	None
MLOC_51052	6	2949 bp	MLOC_51052.3	Available	Available	LOC_Os03g49510.1, FRAME:-3, EVALUE:0.0, 13103.m05368 protein phosphatidylinositol-4-phosphate 5-kinase, putative, expressed
CDS Structure of MLOC_51051

CDS Structure of MLOC_51052

Contig Sequence (7868 bp)

>contig_368371 7868 assembly3_WGSMorex_rbca.fasta
CCCCGTAACCGGACCCCGGGGTTCCCCGAACGTTCGGATCGCAGCAGGACCCNNNNNNNN
NGAGTAATAGTATAGAAAACTAGCCACAATAGGCCAAAGCTGTGAGTTTTGACGAGTACC
CGTAATCGTACCTTTGGGTTCCCCGAACGTCTGGGTTGCTCCGGGACCGAAAATGAGGGA
GTAACAGTATAGAAAGCTGGGCAGAATAGGCTAAAGCTTGAGTTTTGGCGAGTACCCCGT
AATCAAACCCTGGGGTTCTCCGAACATTTGGATCGCAGCGGGACCNNNNNNNNGTAAGTA
ATAGCATACAAAACTGACAGAATAGGCCAAACTTGTGAGTTTTGACGAGTTTCCCATAAC
CGGCTGCGGGGTTCCCCGAACGTTTGGATTGCAGCGGAGCCAAAATGATGGAGTAATAGC
ATAGAAAATCGGCCAGAATAGGCAAAAACTGCGAGTTTTGGCAAGTACACCGTAGACGGG
CCCCGGGGTTTCCCGAACGTTCGGATCGCGGCAGGACCCAAAATAAGTGAGTAATAGTAT
AGAAAGCTGGTGAGAATAGCCAAAGGTGTGAGTTTTGACGAGTACCCCGTAATCGGTCGC
CGGGGTACCCCGAACATTTGAATCGCAGCGGGACCCAAAATCAGTGAATAATAAACAATG
AAAAAAAATCAGAAGTACACGTCAAGACAAAGCGGAGGAGTTTGGCTGATTATCCCAATG
AAAGTACTACACGTCAGCTGTGTGGCACTCCGGTCATGGTGGTTTTTGCTGGCAATTCCA
GTAATGTGATGGCAAATTCCAATGACACACAGCAAGTTCCTGTCGAAAATAAACTGAAGG
ACGACAGTTGTCATGCTTGCAATTAAAGTTGTCATCCTTACGTGACTAAACTTTTCATTA
AAAACGTTCGGAGTTGTCATGTGCTCATACTTCCTCCAATCTATATTAATTGTCCTTGAT
TTAATACAGTTATTATACTAAATCAGGAGTACTTAACTTAGTTTGACTGAAAGTCCATCA
AATTATTCTCTAGTACTCCCTTCGTCTTTAAATAATTGTTACGAATTTAGTACAGTATTA
AGTTAGCCTAAATTTAATACTAAAATAAAGATATTTATTTTGGGACCGATGGAATACTTG
ATTAGTTCAAAGATGCATGACGATAACGACAATAAAGAAGCAAATAAAGCAAAGAAACCA
TTCGGCCTTTTCCAACCATGCCCTCACCGACGAGTCACAGTTAGTTCAAAGAAGCAACGG
AGATTGCCAGAGAGACGAACACAGCTCACGAGTCACAGTTAGTTCAAAGAAGCAACGGAG
TTCGCCGGAGAGACGAACACAGCTCACGCGTACGGCTCCACGGTGGCGCATTCCATAGCC
AATTTCTGGTACATGACATACAGAAGGGGAAATAGTCACCGGTACAATAAGTAAGTTTTT
TGGAACTGCACAAGAACTACATGTGTTGCCTATTGAGTATTTCTAGTGAATATGTTCATC
CTTTACAACAAAAACAACAGCAAGAAAACAAAAATACCCATTACTGCTATGTACTGTTCA
CGGCCTCTCTAATTTTAGTCTTGCTCAGGGAAAACCCTCTCCAGGAAACTAACGAATCGT
TTCGAATACAAGTTCGGATCAACGGATGATATCGAGAGAGGGTCGAACTTGAGAGATTTG
ACCGCATGCTCCACCCTCTTGGACGCGTTGTACTCCTGCAGTATGTCTATGATGCCAAGG
TAGAGCACCACGTCGTACTCCTCGACCGCGTCCGTGCTTTCCAGCAATTTTCGGGCTCGG
GCCGGCATGTTCACCCCTAGCTGCACTCGGAACCTGAATATAGACCGCCCAGGAATCAGA
AACACGACTTATCTTGGTTATTACTATAAGGTTAATAATAACCATGCATGACCTTTAATT
TTCTGAAAAAGAATAAAACGCTCAACACACTTGAATTCATACAGTTTAGCAACATATATC
CCAGTATTGGGCAGAATTGTAGAATATTTTTGACAAAGTTAAGAAAATCTACCTTCCGGT
GCCCGGCAGAACAAGATCGACTTCTTCGTAACCACCTTCTGATGCTCTAACCATGCTTCC
TCTGATGTGGGAACCGCCTACTGTTGTACCTGGTTCGTGAGCAACTAGAAGAAATCCCTT
TGAGGAATTCGCATCCTCACAATGCAGTGGCACGCTACCTGATTAAGGTGAAAGGCAATA
GATGGAAGTCAAAACCGGTAGGCAAATGATACAAATTTGATGAAACTAAGAAGCAAAACA
GAGTGTACAAGTGTGCAATCTGAGGTATTTGTTTCAACTTCCAATTTAAGAAAGATTCGC
CATTTTAGAAGAACATAAGTACTATTCATCTGTACTTGAGGTAGGGTACTGGGTACATAC
AATCCATTGCAGATGTAATCCCACTGCTTTCGTGTGTATCCTGATGTGACGTGGCAGTCT
TCAAGTGATTAGGGGCTCTGAAATGGATTCCCAATAGCATGCTATAGTCAATAATCGATT
GGGATTCCAGGAACATGCTATCAAGAGCTATCTGCCTGAAAATCGGTTGACAGAAGTGGT
TAGCAGTTCGCACTTATCATCAAATTGTCAATTGTTGAATCATATGTTTATGAATGTTCA
ACGCTTCATAACCTAAAATGAGATTTCAAGGTTTCATAAGCAATTATTCCATGGTTCCCT
ATGTTTGAAACTGGTTCCAGAAAAAAGAATACAGCAGAAATGGTGCAGCAATATGTCAAG
CTCAACTAGAGAGATGCCATTTCATCATATTTTTACTTCTACAAGAAAACAAGTTCATTT
ACTTTCTTTGGTTTGTACAAGGACCCACTGGAACAAACTTCTAGCAAGTAAATTTGTAAA
ATATAAGGGTCGTGAACTCTTAAAGCTACCGCCAAAGAGAAAACAAGAAAACGAACTATA
GAAAGATGGAAAATATACAGATCAACAAAGGAACAGCCTACCTGAAAAGCGCTTCCCTCC
ATGATTTATCGACATGAAATGCATGTGCTAGGTCAAGATCCTTCAATGTTGTGTTCTCAT
TAATTTTTTGCTTTTTTGTTGACCGGCCCTGTGTAGATCCCTTTAAGTCGTACTTACGGT
GAATTCGCAGCTCAGTGCAGAACATATTACCCATCACAACAAAACGGACCTGCAATAGCA
CCATAGATGGCAATAACTATGGCAAATGCATATGAAATAAACTACAATAGTGCACCAAAA
ATATGACCATGTACCTTTTTTCCAGCTTTTAGCGTAATCCTGTGCACGCCAAAAAATTTC
GTAATGAGAGTATTATCATAAGCTTTGACATGATTGTAATATTTTGGAAGCATCTTCAAC
AGTATCTGCAGGACGTATTACATCAAACCAATCTGCAGTAGGCATATCTTATCACTCAAC
AAGGGAGCCAGTTTTTTTTATGGGGTAAAGCTCACTTTTACTTATATTTGAATTACTCTA
CTAGCATTGTCTTTTGCGCAAGAAACGGAATTCCTGGTTGCAAATATAAACAGGGAAACC
ATACTCATAAACAATCTAGCGGACCATACCTTCAGCTCACTCTTTCTCAATGTTTTTATA
ACAAATCGTTCGTCCTGCGAAAGATAGAAAATACTGCCACTTTTCCCAGGTGAAGAAAGC
TCCTTTAGACTATCACCCCCACATATGGACATCATGTAATCTGCGGCATCGATATGAAAC
ATTTCCCGGAGATTCCTAGCAAACATAGATTTGCTACTTAGAAAATGACTAGCTTTGGAG
AAATGAAAGAAAGCAGAAGACGCTATCAAAGTTCAGGGTTGATGCAATTTTCTCTTCAGT
CTGTGTCATCCAGCACTGTCTCAACAAATATTATACAAGCACTATTACCGTTTATACTCT
AAATAAATAAAAATAGTTGAATTATAAAACAGTTAGATATGTGCGAACTATTATTCGTGG
CACACACTTCAGCATGAGCAGCGCTCTTATGCTGTGAGTCACAGCATAAGACCACCAACG
CCAGAAGAGCATTCATAAACCTGGGAATGGTTATTAGAAAACCTGGGAAAAGGAGTCACA
GCATGAGCAGCGCTCTTATGCCTGTGACTCCTTCAGAACACCAACAGAACTTCATGAACA
TTTTTTTAGAAAACTTCATGAATGTTATGACCATGAGTTTCTCACTTCTTTTTGGAACGG
CCGGCAACTTATTTGTTTGAAATTTAGTACTATTTTTTGTGCCTATAGAAACAGGGTGTC
TAACCATTCTGCTTCTTCATTCAGATGATGAATTATATGTTCAAATTAACTCCTTCACCA
TTTTCTACATCAGTTGGGGAATGGTGAATCATGGAAAGCACACCCTAATATTCAACTATG
GATAAGTGAGCCACAGTTTTAAAATCCAATCAGAGGAAATAATAAGAGTACGGTAGTAAT
TATAAATTAGTGTACACTTTGCAAATTGGAAAGAGACGTACCGGAAGACCATAGGACAGT
AGTCTTTCCAAAAGAAATTGACAGAGCAGTGTGGAGGGGTATACTGCGAGCCTTCACAAG
GGAAGTACATTATTATCCGGGCCCTAGGTCCAAAATCATTTGAACGAACTTCACGCAAAG
GTACAGGGGTGATTTTACCCACGGTATACCTGAAGAACATTGTTTTCTGGTCAATCAGTA
GCTAATGGAACAGCAATAAACGAAATGATGATTTGACTAATGGAACATCTGATAGCTAAA
ATAACTTGAACAAACAACAAAACAGTGAAATTAAAGAGATGGTTTGATGGTATAGGCATA
TACTCCCTTTGTACCTAAATAATTGTAGTTGGGGAGAACTAAACTAGTTCTTCCCAAGTA
CAATTATTTAGGTATGGAGGGAGTACTTAATAGGTGTGGTGTTGGAAAACATGCCAAGAA
AATGTGACAGTGACAAGCATCTGTGAACGATTTTTTTTATTACCAAAATGGAAAATACTC
ATGTATGGAGTTATATACGTTACATTAGTGTAGTACATCTACCTCAAAGATAAATTATTC
CTTTACACAACATGGACCATATGGATTTATCTGGAGCCAGTATTGACCACTTTCCTCGAA
AGAAGAAACTACTTTTATTGTACTCAAATAAGAAGAACTATAACTACTTGTTCATCCTTT
GCCACTGAACCGACTACTGAATGCTGATCTTTCAGTTAGTAATACTGCGCTTGAATTATT
AAGTGATTATTACTCTGGTGCCGTAGATCTGCAAGTACCCATTCCTACTTACGTAGATTA
CTTCATTTAAACGGGGTGCACCAGCCTTAAACATATATACTCATTATGCAGAATAACCAA
CATAAGGTAGATTCCTGCAGCTAAATTTAGATGACACAAAAAATTGCAGCGATACATTGA
TGCTATTCAGCTCTCACCTGATGCCGAGTTGCAAATTAAGCATTAGAAAATAGCTCCTGT
GTCCCTTGTAAATAGTCTCCATTGGCCCTCTTTCTTGTTTTTGCCAGGTATTTTCCTGTG
TTTCACCACTGTCCAACATTCCTGAATGTTTGCCTTTTGGATGCTCGGAAATAAGCACTC
CTTGTATATATTCCCGTTCATAGACCAAATCCTTATGAACATCACTGTTCTGTAAACGCT
CGTTACTTGACAAGGATTTATTGGGTGGATCTTGTGGCGAGTGATTTCCAGAATCATCAA
CAAAAATTGGTGTTGTGCCATTTGAAATGCGCCTGGGACGATGAAAAAACCTACGTAGAC
CCCATTTGTTGCACAGATTTTGCAATAGAAACAACAGTCCAACTTTGACCTTTTCATTAC
TAGAACTTGAAGCACTTGTACCATCATTATTTGTTGCACACTCAGAAACTTCAAGGTTAC
AAGGTATTTTACTTCCTGGTTGATAAAATATGCCATGGCCATCCTTGACTCCCCTATCCC
ACGTACCAATGTAACATGCCCCTGACGCATATTTGCAGTAACCTTTGCCATGAGCCAGCC
CATTGAGCCAATTACAGTCAAGAGTATCACCATTTACCCACTGCATTACGCCTCGGCCGT
TCATGCTACCTGACTTCCAGCTACCAATGTAGATGTTGCCAGCAGCCCATGTATATTTAC
CATATCCATCCGGCAAACCCTCGTTCCACAGACCTTCATAACTGTCAGAGTTTGAGTAAA
CCATTGTCCCCATTCCCTGCTTTTTGTTCATCCTCCAAGAACCTTTGTAAACCGAGCCGT
CGACCCCCTTGAAAGTGCCTGTTCCGTCGATGAAACCTCCACGGAAGTCGCCCTCATAGG
ATGCGCCTGAGGGCCACTGGATCATTCCTCTCCCGGTCATTTTGCTTTTATCCCATTCGC
CGTCATAGAGGGATCCATCCGTCCACATATACTTCCCCATCCCGTGAGGCACTAACCCAT
CGAAGTTGCCCACATAGACGTCTCCATTTGGAAGGGTATCCCCCCTGATTTAGAAAGAAA
AGAATAGCCACCAACAAATATTCAGAAGGAAAGAATAATAATACTAGTAGTTCCCAAAAA
TGAATTGCAGAAATCTAACATTAATGTGCAATTGCAAACTAGGCTCTCATTTAATCATTT
AATGCGCTCTTCAGTATCCAGGGAAAGCAGCACTGAAAAAACACTTGCTATTTCTGTGAA
AGTAAGGCAGGCCAATATTAGAAATGTGAACTAGCACACCTCTGGGCGCTCCCGTTGTTG
GACTCTGCGCCGGCCATCTCAATGTCCACAGACCACAGGAATGGCTCGAAAACCACGCAG
AGGCGTTCAAGATGGCCTGAAACAAAGCAAGGCAGAGGAAGCTGTCACGCAATGGCCACT
TTGCCTTTGCTTGGAGAAGCAGAGCAAACAAAACAAAAATCCACTCTCATATAGTAGTAC
TAGTCAAACAAATACAGTAGTACTACCTTCGTCCGGAAATAATTGTCCTAAAGATGAATG
TATCTAGACTTATTTTAATTATAGATACATTTATTATATATATTTTTAGGATAAGTATTT
CCGGACGGAGGGAGTAGTATTTTTTTTCCCATAAATACAGTAGTAGTAGTAACACGGAAG
AAGAATTGTACTAGTACTACTGCTGGTGCAAACATTCTGATAAGCCTGCGGCAGATACGT
CACATCACCTGGGCATCTATCACAGATCGAACCATCAGTAAAGTAAAAAAACAGTAAAGC
ACAGCGTCAAACATGTTTGACAGCGGTTACTTATGGTGATAATACCTAGGAGTATAAGCA
AAGGCTACGAAGAAAGTTAGTACGGTTATCCGTGGACGGGAAAGGAGCCTGGAATCAGAA
AAGCGAGCCCGGATTGCAGCAGCCACTCAAATTCGCAGCAAAGCTGAGGAACGCCGCCGC
AAAGCAACTAGTAGTAGTGCTCGCCGCAGCCCGCGAAGTTAAAGCAGGACAAGTCGGAAC
CGGCTGGATTCGAGCTAGAGAGACTGGGCGCGCGCAGCATCGCTTCCCGCCAATCGCAAG
CAATTCGCGGTGACGGAGCGAACCAACAGCAGCAGCAGGCCTGGGAGGCAGAGCAAGCAG
GAACCGGAGCCGTACCTCAGCTCGCCGGAAGCAGCGGGAAGGAGGAGGGGGACGAGGAGG
AGCTCATCGGCAGCGCGCCGCCGGCAGGGGAGACCGCGCGCGCATCCGACTCCGATCCCG
ATCCCGATCCGCCAGCCGGCCGGCCAACGGGATCACGATCGCGGCGAGCGGGGAGGGAGC
CAGGGGCAGCGGCAGGGGGGAAAGGAAAGGGAGAGGTACCGGTACCGGTACCGGAGGGAT
AGCAGGGGCAGAGAGGGGGAGGGGGGAAGGGGACAGGGGTGGGGCCCGGGACGGACCACC
CGACGTCG