morexGenes - Barley RNA-seq Database

Contig contig_368215
Source Contig contig_368215
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_368215 (10696 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_368215

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_51011	2	2334 bp	MLOC_51011.2	Available	Available	LOC_Os10g35190.1, FRAME:+2, EVALUE:1e-156, 13110.m03151 protein ZOS10-06 - C2H2 zinc finger protein, expressed
MLOC_51013	1	440 bp	MLOC_51013.1	Available	Available	None
MLOC_51012	1	437 bp	MLOC_51012.1	Available	Available	None
CDS Structure of MLOC_51011

CDS Structure of MLOC_51013

CDS Structure of MLOC_51012

Contig Sequence (10696 bp)

>contig_368215 10696 assembly3_WGSMorex_rbca.fasta
CGCGTGCGGCGGGGCAGCGTGGGCTGCCGCCGCCGCCCCGGGGAGGTCCGCTGCCGCGGC
ATCTGGTGGCGCCCCGGAATCGGTGACTGTGGCTTGCCCCGACCACCTGATCATCGCGGA
CCTCGCCGTGGCGAAGAGCCTCGGCGCCGTAACAAACTCCGCCATCGCCGCGACGCGCGC
CATTGGCCGCCGCTCCCGCCGGCCCCTCGGCGAGCGCGTCCACATCTGCTCCCGCTGCGA
GTTCCCCATCGCCATTTACGGCCGCCTCGTATGGAATCCTAAATCCCAGCATCTTCCCCT
GTCTATGTCTTCACTACTTCACGTACTATATTTGTGCTGGAGTTGATAAAGAAAAATCTA
GATTTTATGTAGCACATATAACACCATCTAATTATGTATCATTCAGGAGTTAATTGCTCT
TGTAATCCTTGTTTGGTATAATTAGTCAAGTGCATCAGGCTGGTTAGAATCTCTGCAGAG
TCGGTATGCTCACTGTTTAAGCATTTTATAGTGATCTGAGAGCCCAAGGCCAGTAACACT
ATTGATATCACGCAAACAGAATACCTGTAGGAATTGCTAGTGGTATATTCGAGGGGTTTG
GTAGACATATGTAACTAGAGTCGATAGTATATACTGCAGTTTGTGGTACATTTGTTTGCC
AGAAAAAGGATGTAGGTTGTTTTGTTTAAGTGTCGAATGGGGGAGGCCTACGGTCCAGTT
TAAAGCTGTATTGACTGTAATCAGTAATCAAATTTTGTCTGTGACACTGTTGGTGTTTAC
TAATTCTTTTAGGGGATTGCACATAAAATTTATATTAGTTTGATAATGTTGTGTTGGAGT
AATACTGAATCTAAATTAATATGGGATGTTCCTATTCACTTTATTCAGAATTTCTGGAGT
GGTTGGTGCTCTGATTTCTTAAGCTGAAAGTATTCCGGCTATCAAGCTTGTCCAGTTTTA
GTACGAGAGGGCATAAGCAAGCGAAACCACTGATCGTATGCAATACATTTCACAATCATC
TAGGCATGTCACCATGTCGTATGTCCCTAAACTAGCATGTACTCCCACTGTCCCACAATA
TAAGATGTTCTTGCAAGCTGGGAGTATATTTTACGTGTTGTCTGAGACTCTCAGTTACCA
GCCTGGACTATATGTGGTTTATTCATTTTAGTTCTTTTGCTAATGTTCGTAGTTGAATCC
TTCGACCGATGACTTTCATTAACTTTGTGCAGATTCCTTGCGAACATGCTTTCTGTTTAG
CCTGTGCAAGAAGTGATTCCAGCTGCTATCTGTAAGCATTCTCCTGAGCTTTTCCTAACT
TGGTTTTATCCTATTCTCACCTTCTTAATATTCGATTAACTTACTTAGTGATTCATGATA
GGATAACTCTGATAATCTGCAAGGCATGATACTTGCTGGAATCAGCTTGCTATGTGACAT
CTTAGTATTCGCTGATTGAGCTTAAGGAGCTTCAGCAAAGTAGATCTCATATTATATTAT
CATGCATATATTTTGAATTATGTGGTAGTGCAGTGGAACTATTAGTAACCTTCACCGAAA
TTTCTTGTGTTTCAGCTTGTTTTCTTTAATTTTTCTATAATTCTTACTGTTAACATCTAT
AGCTGCGAACATTACTTAAGCTGTGATGTACATTGTCCTGTACCCTTCATGAGATGGTAA
ACTAGCAATTATAGTTTTCCTCCGTTGACATTGTACTTAAAGAGTGACAAATGTTACTGC
TTATTTATTACTACTATGTTGTTTGAATACTTTGGTCTTCGACATGTCGTTTTGAAACTT
CTATATTTACTTATATCCGCAGTTGTGATGAGCGCATTCAGAAGATTCAGACTGTGAAAA
TGATGGAAGGGATTTTTATCTGCGCTGCACCTATGTGCCTCAAGTCTTTCCTTAAGAAAG
CTGAATTTATGTCTCATGTACCTGAAGCTCATGCAAATCTCCTCCAAAGTAACACGGAGA
AAGAAGAACGTAATGAACCAGATGCTCCTAACATCTCCCGTGCTTCTGGAGGAGATACTC
AAAGGCAATCTCAAATGCCTGAAATATCTACTGCACGTGCTCCTCCAAGGCCGGGTGTTT
CACCCACTTCAAGTTCTCACATGCAAGACCGTGAAGACCGATCTCGGTACCACCAGTCCA
GGGAGAGGGAGCACACCCCACTAAGGCCCCCTATGCTAAGCAAACCACCATCATTCCATG
GTCGCCACTATCCACCAGGGGATACTCAGTCTGAAAACAACACACCTCAAGGATTTGACC
GTCCCTACAGCTGGGGTCATGACGGCACACCTGGTGCAACTCCACTTCGCCAAGAACCCG
ACCATGGTACTCAAGACAAGCAGCAAGTGATGCCGAATTCACCTTTCATGTTCTCTCCAA
TGCATCCTCATCAGCAAAACTTTATGATGCACATGAATATGAATCAGCCTTTAATGCCCA
ATGCATCATTCAGTTACCCTGTCCAACAAGATGGGAATCCGCAGTACTTCAGTGCTCCTT
TCCAGATGCAACTGCCAGATGCTGGGTCAGATCAAGGTTCGGTGTCAGGGCCTGAGGGGC
TTCAGCGCCCATGGGGCATGGGGTTGATGGGCAATCCTTCTCAAGGAGGTGGCGGCATGG
CCTTCATGCCAGCTGGTTTCGGGATGATGCCTGACGGCTCGATGAATCCAGGCATGCAAG
GTAGGGATTTCCAAGGCCAAGCTGACCGTGGTGACGGAAGGGGCGTCCAAGAACAGTTAC
CTATGGTGATGCAAATGCAGATGTCGCTCCCCCCACCTCCTCCTACACAACCCCCATCGT
CTGGACAGCAGTCTTTCAACAGAACTTGATGAGTTTTTTTGCATGCCAATTTTGTGGCTG
CTGCCAAAATCGTGCTGTACTGCGTTGGGAAATTGCAATTTTGCCATCTTGGCATGTAAC
TGATGAGCACTCTGATGGCAGCCTATATTGTGCTATAAACAATGCAACTTAATCGAGTTG
TCATATGCTGTTTGTGAATTGCTTGGTCTTACAAAACGCACGCAGCCCATTGTTGGGTTG
CCAAATATTTTTATGTCTGATGCTCGGCATTTCCATTTGTTGTATTTTTGGTGTTTTAAT
TATGTTGTGCGTTTTTGTTAGGAACCAGAACTGCTAACATGCTAGAAAGAATGACATGAC
AAGTGAATGAAAACTGAATATGATTTCTTGTTGAAATGTCATTTTGTACAGAAGGGAGTT
CCCTAAAGAGAGTTCCCCAAAAAAGGTAGAGAAGAGAGTTAATATTTCTATTGCTGATGT
CCTTCGCAAGGCGATGTCCCTCAAATGAGCAATATGAATGAATAATATAAATGCAAAGAC
GCAAAACACAAAATAAAAGAGGCTGCAACGCAAAATCCCAGAAGGGCTTCTGTGAACAGA
AGGGAGTTCCCTAAAAAAGTAAAGAGAGTTCCTTAGAAAAGGTAGAGAAGAGAGTTAATA
TTTCTATATTGCTGATGTCCTTCGCAAGGCTACGTCTGTTGAATAAGCAATATGAAGGAA
TAATATAAACGCAAAGACGCAAAACATAAAAGAACAGAGGCTGAAACGCAAAATCCCAGA
ACAGCTTCTGTGATGAAACGCAAAAAAAACCATACATGGGGCAAATGCGAAAGTACAGGG
GTCAAAGCGCTAAGTCTCAAAAAATGTAAAGGGTACAAACACAAAAGTACAGGGAGGAAA
GCGTGAAGTCCCAAAAAATAAAGGGGCCAAACACAAAAGTACAGGGACCCAAGCAGAATA
CTATAAATGCAAAGACGCAAAACATAAAAAAACAGAGGCTGAAACGCAAAAACCCAGAAC
GGCTTCTGTGATGAAACGCAAAAAAACAGTACAAGGGGCAAACGCGAAAGTACAGGGGTC
AAAGCACTAAGTCCCAAAAAATGTAAAGGGTACAAACACAAAAGTACAGGGAGCAAAGCG
TGAAGTCCCAATAAAATAAAGGGACCAAACACAAAAGTACAGGCACCCAAGCGCGAAATC
TCAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCATGCT
AATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCTAAGGGACGGGAAAGCTGTCA
CGCCTCGACTTATAAACTGGACTACGCGATGCTCGCCGAGCGATGTGGGACTAAACCCTT
GCACCGCTTCCCTCCCGCAGTCCTCCCCGTGGGTCGTCAGATTCAATGCCGACGGGCCAC
ATCCAAGCCCACACTGAAGTCCTGTCCACCACTGGTTTTTTCTCTAGCCGTCTCACGTGA
CTTCGAGACCCCCACCGGACTGCCGTGTACAAGGTACAAGTATGTTCGCCGCCAAAAAAA
AGGGTACAAGTACGTTCTCATAAAACTCGTATTTCTACGTATAATCATTTCTGCATGTGA
ACAACAGCAGTCAGCAGTTACCTCTGCAAGACAACAATAAAATTACCAAGTTTCTCAGCA
ACAACAAAAAGGAACTTGAACGACAGCTACAAACTGGATGTTGCCTATCTCTATCAAAAA
ATGCTCCGCATTTTGCCCAACTTGTATGCTAATCTTCATACCTTTTTCAGTGTGCTGTCA
ACATAGATGCAGAGATGAAGGTGTCATATACAGTTGCTCATTGATCGACAGTCACAGAGA
CAAGGAGCGAGAAAAGAAGAAATGTCAAGCTTCGGTTTCCTATATGCTACCACTCTGCTG
CAGCAGCTGCTCTTCAGCCAGTTAACCTCGAACTGGATGTTGTGTATCTCTATCAGAAGA
TGCCATGCATTTTTGCCCAACTTGCATGTACTTCCCGTATATTTCTTCTGTCGTCGTAGT
TGTTAGTCCTACGCTGCTACATATCTCATGTACAAAAGAAAAGATGGTGAAATTTCTGCG
TTTATACACTGCTTGAAGATATCCTGAAGGAGTAGGCTCAGCTCCCGTGCTGATCTCCCA
ACCTTGTCTTCTCTCCTACAAGATGATGATGTGTCATTTCGGTTCTTTACATTACTAAGA
TCTCCAGATTTTCGGTAACGCCTAGTTTTTGAATTGAAAGAGAGGGGGCTTACCTTGTCA
GGTAGATGAGCCTTGCATTTATCTTTCCCAGCTCTTGAAAGCATAAACTGCAGCGTTTCA
ACCCTTCAACATGGCACAAATGGAACAAAAACATGATATTATACATGTACAGAAGGATCA
TCCTAGATGAGATGGAGGGGTGGGCAAAATACCGCTGCTCTGCTTCGAGGTCTACACCGA
CTGGTGGAGCAGATGACAAAGTTGAAAATATTGATGCACCGAAGCTTTTCACAAGCTTAA
GGATCGCCGCCAAGGCAACACGTTCAAATGTCTACGAGCGCAGATGACAACAAACACTTG
TATAATCCCAAATATTACCATCACACTATGTGTGACTTTTCATACTGCTAAAACTGTATA
ATCTATGAAGAAAATAATTTTCAAGATAATAGTGGAAGGGCAGTAAAAGACCACAGCGCA
CACTCTAATGGCCATGAGTAAACCTTATCCACTGTGCAATAGGAAGATAAAAGGTAAATT
ATAATACCCTGATAAATAAGATGAAATACCTGTCATATCCGCTTTCAAGAAGATTGGAGG
CAAGAGGTAAAACAGAAGTGTAAATGTCTAGTGTGATGACGGGTTCGATGCCTACGGGGA
TGGGCAGCACCGGGGTTCTTCATCGACGGGTGACGGACGCGGGTACGCGTGGATGAACTC
TACGGCTCCGGCTCAGGGGTTTAATAGACCTGTTGGAGGTTTCATTGAAGGTGCGTCTGG
CCCTGCCAACAAGCAGCGAGCATTCTACAGACCAAAAGGCAGAGGGGGTGGCAGAAGGCC
GAATCCACCCAGATCGCAGTTACTTGCCAACGAGGAGCAGCCCTGTACGAATAACAACAA
GGCTGAGACAACTACGACTGTAGAATCAGATCGGGATGTTGTTCAAAAGTTACCTGCGGT
TGAGTTGCCAGCAAAGAATAAAGGACGACTGCTACAAATCCGTCGCCTGATTTGTACCAG
ACGTAATCCTCCTAGGTAGCCGTCCGATTAAACGAGCCCTCACCGTCAGATTAAATTCCC
GACATGGAACAGAGGCCACGTGGTGCTCGAATGCAGCACCGACAGCGTCCGACGAGCTCC
ATTGCAACTTCGAAAAACTCCATTGCAGCCAGTGGAGCTTCAACACAACACCGATGCTCC
AGCGAAGCTCCACTACAACCCCGGCGGAGCTTCAACGCAGCACAGGCACGTCCGCGAAAA
GCTTCATTGCAATTCCGGTGTAGCTTCAATGCAACAAGGCGTGTTCGACGAAGCTTCATT
ACAACTCCGACGAGTCTTCATTGCAGCCTGGCGTTGCTCCATTGCAGCTAAGGCGATGCT
CCCAATAGCTTGAAGGCAACATCACCGGAGTTGCAGCGCCCACGTCGGCCCTCGTGGCGG
TCGTCGTTGCAAAAGTCCGTCACCAGAGTGTGAGCTGGGCACCGGGTGCTGCAAAAGCCA
CCCCGCGGGCTGGTCCGACGAGGGCCGGGGTGATGAGGAGAGGCGAAGCATGGGGATGGA
GGTAGAAGACGAAGTAGAAATGAATCTGGCTCTAGGAGGGGAAGAGATAAAGTTGAGAGT
AAAAAAAGAAACAAGAGAGGCAGCATGTGGGTGTCTCGCGTGGTGCGTGGACCACGACGT
GTGGCGTGCGGAAGACCCGACTGATTTGCAGAGAAAATCAGCCGGTTGATTCTAAACGTT
TTCCCACAGGAACTGGTACCAATAAGGCGGAAGAGAAAGCATCTAAGTGGACACACAAAA
AAGAAAAATTATGTTGCTTCCGTTGTGGTGAAACCGGACACTTTGCGGCCGAATGCTCGG
TGCTGTTTTGTGATATTTGTCGTAAGCCTAACCATGACTCCGAGGGATGTCTGTGGTTTT
AGGGCCAAAACCGGTGTTCACCATTTTTGGAGCATGCTGTCCGGAGTTGATGTTCTTTGA
GTCTCCTCTGTCGGCATCGGTAGCTCCGAGCGTGGGCAACACTAGGACCGGTGTGATCAA
GGTGACTAGGGGTGTTCTGTCTAAAGATCAAGTGATTCAGCGCCAGCCGGAGTTGGTTTC
ATCTACCTTTTAGTGGACACGAGTGGTTGTGGATGATCAGAGCTTCAAGGTTGAGTTCCC
AACTAAGAAAGATCTTGCTAGACTTTTAAACTTCGGAATGAGAAGGGCCCGAACAATTCT
TGTGTTATGGAGTTCGAGGCTTGGACTAGCAAGGAGCCAGAGGGGGTACCTATGTCGCGG
CATTGGGTGCGTTTTATTGGGGCACCAAGCGTTGCTTTGGATGATTACGTGGTTACTTGG
AGTCTTGATTCGTTAATTGGAAGGACAGAGCAAGTGAATACGACCTTTACTCGGGCAAAT
GCCGAGGCACGCCTGTTGGTAAGCGTCATTAGTATTGAGCATATTCCGGATGTGGTCGGA
TGGTGCTACGCTGGTAGGAGTTATGACCTAGAAATCGAGACTGAAGAAAATGCTCATTTC
CATGAGTTGGGGCAGCACATGGATATGGATACGGATGGCAGCCATCAAGGTGATGATGCT
TAGCACATGCCGAAAGATCCCTCGGTGGGCAATGGGATGGGTTCGGCTAGGCCAGAAAAG
TCATCGGATTCGTCAGCACAAACGACTTCAACTCCACCTCAGGCCGGTACATCGACAGCC
AGAGCTGTCGCTGCATCGAATCAGCTCAGGTTTCGTTCTTTTGCTTCAGCACCAACCAAG
ATGCGGTGTGCATCAGTATATAACCGGACAGAGCAAGCGCTGCATCTGGTACGGCCGTCC
ACTATTGACAAGGTGGTGCCGCTACAACAACGCTCGAGGCTCGAGATCACGACATCGACT
GCCGGTCTCCAGGTTGGTCCTGCGGAAATGCAGCAGCCGATGATGGATGCATGTGTGGTC
CTTCAGAACAAGCAGTTCCAGCCTTCTCCGCATCAGCACCATGTGGCTCCTGCATCATGC
GGGTTGCCATGAAGTGGAGTCAAGTACCGCTCCTGGCTGCCCGTTAACTACTCTGGCAGA
GAGTCTGCTCCCAGCCAGAAGCTCTCCCTCGGACGCCAATAGGCAGGCGACTACATTGAC
TCCGACTGAGCACTCATTCAGTGACGATGCTATGCACAGGGATGCTCCGACAAGGGCAGT
TGCCTCTGCTAATATTGAGCGATATATGCCTCAGGTTATTGCTTTCGGAGGGGTACCAGA
CCCGAAGACGACTCATAGGAGATCAAGCTTACGTCTTCAGGGTCAGGAGGACACTGATGA
GCTGCAGTTGGGCCGAGCCATGAGGGCAACTAAACTTCACGACATCGAAGTAACTACAGA
TATGTCCGTCGATACCAGCAGTTCTGTTCTACACTTCTAAGATGAGGAGATTATTTTAAA
CGCGAACAAACTAGGGGTATCTTTAGACAATAATGATAAACAAGTTTCAAAATCGGTTAA
TGACCTTCTTGACTTAGAGGCTGAGAGAAGTATGGACATGATTAGGAACTTAGCTACGGT
TAAGACTATGAATGATGAAGAAATTAAGGCGCTTGGTTTTCGTGCTTTAGAGAGCCTTTG
CGAGGATATGGGACCTACTTGTATTATAGCTGATGGTGTGACGGTTGAGATGGAAGAGAC
TGTGTTGCCAGAAAAATTAGATGACAACGCTAAGCCAGATACCGGTTATATGGACCGATG
GTTTCCCAAGAATAGACCAAAAAGACCTTGGAAGAGGAAGGTTTATCCTGTATCGGCGGT
TCACCGAAGTGCGCAGCTCAAGAAGGCAAAAAATTCTATGATGAAAGATGAGAGGAATCT
TTTGGAATAGCAGAGGTCTTGCTGACTTGGCTAAAAGAAGGTTCCTTGTGGACGCGACCT
TAGAACACAAACTTGACTTTATTGCATTAATGGAGATCGGTAGAGACAATTTCAATTCAC
AATTCCTGCGAACTCTATCCGGTGGTGTTGACTTTGATTGGCACTGTCTACCTCCAAGAG
GAAGATCTGGTGAGATCTTACTTGGGGTAAAGGCTGAAACCCTTGAAGTGTGACACGTGT
CCTACGGGGAATTTGCGGTCAAATTAAGGGCCAGATCAAAGTATGATGGGTTCCAATGGG
CGCTGGTTGCAGTCTATGGTGTTGCCCAGCCAGAGCTCAAGATGGACTTTTCAGCAGATT
TGGTCAGGGTGTGTGGTAACGAGAGTCTTCTCGTTCTTGTCGGGGGTGATTTCAATATCA
TTCGCCAAAGGCATGAAAGAAAAATGATAAATTTGATGCCAGATGGTCATTTATGCTTAA
TACGATCATCGAAAGTTTAGATCTTCGGGAAATTGAACTTTCAGGCAGAAAGTATACATG
GGAAAATGCGTTAGCTAACCCAACTTTTGAGAAGTTGGATCGGGTATTAACCAGTGTGGA
TTGGGAGCAGAAGTTCCCTCTCGTATCGGTTACATCTTGCAACGAGCTATTTTCGATCAT
GCTCCGCTGCTTCTGGATTCTGGAGAAGCAACCCACAGGGGGAATAAGAATGCCTTTTCC
TTTGAACTAGCTTGGTTTGAGAGGGAGGGCTTTCTGAACATGGTTGCCAGGGAGTGGAGC
CGTGTCAAGCCGGGCAGATCGAATATGGAGACTTGGCAGAATAAAATTAGACACTTAAGA
CAATTCTTAAGGGGATGGGCAAAACATGAAAGCAGGATTTATAAGGTGGAAAAGGAGAGG
CTCCTATAACTTATAAATGAGCTTGATGTCAAAGCCGAAGGGGTTGTACTCCTACATCAC
GACATGACTGCCAAGGCCAAGGCTGAACAAAAGCTAAAGCTACTTCTAAGAGAGGAGGAG
TTGAAGTGGGCACTAAAGGCTAAAGTGCGTCATGTGGTTGAGGGTGATGATAACACTCAT
TATTTCCACTTGATTGCCAATGGCAGACATAGAAAGAAAAGAATCTTCCAGTTCGAGGAG
GATGAAGGTACAATTGTAGGAACCGAGAACCTAAAATTGTATATTTCGAACTATTATAAA
CAACTATTTGGTGCTCATGACGACAATTACTGTCTTGGATGAGCAAAGGGTCGATGACAT
ACCTCAACTCGGTGTGGCCGATAATGAGGTCCTCTCGGCGCCTTTTGCGGATAAAGAGGT
TTTTGAGGCCATTGCGCAGATGAAAAATAACAAGGCAACACAACCAGATGGGTTCCCGGC
TGAATTTTATAAAAAATGTTGGCAGATTATTAAGGATGATTTACTTCCGATATTCCATGA
TCTGTTCAACGGGCATTTACAGCTGTTTCACACTAACTTTGGAATGATCACATTGTTGCC
AAAGAAGGAAGGTGCGCATTGAACAATTTCGTCTCATCTGCCTGCTGAATGTGATTTTTA
AGATATTCACTAAGGTCGGTACGAACAGGTTGACTCAGGTTGCACATGACTTTGTGCAAA
AAATAGCTTTCATGCCAGGCAGAAACATACTTGAGGGTGTGGTGGTCCTCCATGAAACGC
TGCATGAAATTCACTCAAAGAAACTAGATGGAGTTATCTCCAAAGTGGATTTCGAGAAAG
CAAAAGAAGAGCAGGATACATATCAAAAGTTGTTCGGGTGTGCGTCGGGTAGCTTGCTGA
TACGTCTCCATCGTAT