Map Locations of contig_36814 (8261 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_36814

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50991 2 1143 bp AK372375 Available Available None
MLOC_50992 1 1415 bp AK368496 Available Available None





CDS Structure of MLOC_50991






CDS Structure of MLOC_50992






Contig Sequence (8261 bp)

>contig_36814 8261 assembly3_WGSMorex_rbca.fasta
CGCATTTCTGTCCCGCGCGCGGTAAACTGCCGTTTTTTAACGCGCGCGCGCCTTTTTGCG
CGGGTGTTGGAGATGCTCTAAGGCTCATTTGTCAAGTCATAAATTACACTAGTATAAGTT
TGACCAAATTTGTATAGATAAATTACAATCAATGATTTCTTGAAAGACTACTTCTTGGTA
GATCTAGTTGCTTTGATTTCTTATTTTAAATATGCCATTTTTCTCGATAAAATCTAACAA
ACTTTAAAAGATGTGACTCAACACAAATCAAATAAGCCTTGTGAACCCAGACATGAGAAG
TACCTGATTGTGTTGAGATGTTGCTCGTAGACCATCTGTTGCACAGTCCCATTTAGGAAG
TTGAAGAAGCCATTAGGAACACCTATCCTCTTCCCTCTAAGCCCATCTTTCTTCAAAAAC
TGCATGTATCCACCACGAGGAATGTATTTTGAAGCTGCCATCGTGGCTGGAGCGTCAACT
GCGTCATAGCCGACAATGGCGTCCAGCACGTGGACCGCATCAGCCACCGTGCGACAAATC
GGCCTGTTGTTGATTAAAATGTCAAATATCCATTGTTTAACATGGCGTAAATTTCTTTGA
GAAATCAATGCACACAACCGCCATGTGTTCTACGTGGCCATGTTGTGAGGCTGTGAGCCA
CCTATCATAAAATGGAATAAAAGAATGTTTGTATGTACAACAATAAAGATCTAAAGCTAA
CAAATCATGACCTTTATCAAAAAGAAATTTTAGTGCTTAGGTTTTGCTTGTGAATATAAC
AACACATACATTTCTTTAAGATGATCAATAAGAACAAAATGAATATGCGGGGGAAATCAA
AATAAAGAGATATGACAATGATTGCACGAATAAAAGAGCAACGATATATATTATGGCCTT
TATGGGCAACGATGAAGCCTGTGGAATACGAATTAGGAATCACAACGTTCTAATACAAGC
CACATGAATATTTCAATTCAATTATATTGTTGAAACATCTTAATCACTTACCCAACAGTG
TCTTGGCGTGGTGTGATTGGGACGATGCCAGCCCGGCTGGTCAACCCCACCGTGGGCTTG
ATCCCCACCACCGAGTTCAGCGACGCCGGGCATAGTATGGAGCCGTCCGTCTCCGTCCCC
AACGTCACCGCCGCCATGCTCGCCGCCGCGGCGATCGCCGACCCCGTGCTCGACCCACAC
GGCGTCGCCGACAGCACATAGGGGTTCTACCCGGGTGAAAGAATTTGAATCGGTTCTAAG
TCTAGAAGGATCAAGTCACGGAAATGAAAAGCAGTCTCAGGCGTGCTTAGTTACCCTGCC
CTTGCCGCCGCGGGCGCTCCAGCCGCCGCCGGAGAAGCTGCGGAAGTTAGCCCACTCGTC
CATGTTCGCCTTGCCGAGCACGACGGCGCCGGCGCGCCGCAGCCGGCGCACCACCCCGGC
GTCCCGCCTCACCACGGAGCCGAGCAGCGCGAACGACCCAGCCGTGGTGTTGAGCGCGTC
ACGCGTGGCGATGTTATCCTTGAGCAGAACTGGCACGCCGTGCAGCACACCGGTGGCTCG
ACGGCCGGAGGAGCGCTCGGAGTCGGCGCACGCGGCTTGCCGGAGCGCGTCCGGGTTGAC
CTCGATCACGGCGTGCAGCAGCGGGTTGAGGCGGCGGATCCGGTCCAGGTAGAACCGGAC
GAGCTCCACGGAGGTGAGGCTCCCGTTGTTGAAGCCGAGCTGGATGCTGTCCAAACTCGC
CTCCTCGATCCGGAAGCCATGGGCACCGGCGAGCACGAGGGCGGCGACGGCGACTGCCAG
GAGCGGCCGAGGCATCCTGGAGCGCGTCGAAATGTGAAGTCAATGCTGCTCACTCAACTA
ATCGATCTGTGTACGTCCTTGGATTTCAGTACTGCTCCCTTTGTATCGTGCGATGGACTC
CAATTGGCAAATGATATATATATATATATGCAAGCAAGCAACGGTGGATAATACAAAGGG
CAGTTGGTCAGCACAAGTTTCGTTTGACCAACAGAATCGGCAACACCCCATATCTAATTC
TTCTAGAAGAACGTCCCTATGGAATGGTCATAACGTTTCACATTTTGTAGTTTTTTCACA
TATTTCAGTTTATTGAAATATAGTTTAATATATTCATAAAAAACTTAGTTCAAAAAGTAA
GGATGATTGAAATTTATCAAAAAAATAAATAAAGAAAATATTAACACCCACAGGTATGGC
ACGAAGGAACATGGCCGAAACGCATCCATTACCATTCACTTTGCCACGTCAAAACAAATA
ACATCAACGGAAATCTTTTTGGTTTTCGGTTTAAAAATATTTTATCTTCTAACTAAAAAT
CCAATTAAAAATCCATTTTCACCATTAAATTCGTCTTGACGAGAACTTTAAAACTAGAAC
CCACGTTGATATGTTTCGATGAAAAAAAAAATTGACCAAAAGTTACCATGACGTTTACAC
TATAGTTCCTATAGTGTTTACACTAAAGTTGTCATGACATGTTCTATCTATTTTTCTTCA
AGATTTATTGATTTAAAGCTACCATTATATTTTCAACTACTTTTTAAGAAAAAAATATTA
ATTGACCATGGCAAATTTAAGTAATTAACCACGGCAAATTTAATGCATGGATCATGATAA
TTTTTAGTAATTCATCATGGAAAATTTAATTTATAGATCATGGCAATTTTAGTATTTTAA
CCATGATAATTCCAGTACTTTGACCATGAGATTATTTTTTGTATGAACCATGGCAAATTT
AAGTGCATGTATCATGGTAAATTTAAGTAATTCATCATGTGAGTGTATGCGCGTATGTAT
GAGTGCTTGCGTGTGTACTGTAATAAAATAAAGTAATTCACCATGACAATTTTAGTTTAT
GGTTCATGGCAAGTCTAGTTTCGTAATTCTCTGTTTTATAATATGTTAAAATTTATCTTT
AAATGTAAAAGAAAAAATAGCTAAAGCATATCATGGTAACTTCAGTGTAAAAACCACGGC
AATTCATGTGCAATAGACATGTCAACTTTTAACCAAAAAATATCGTCGAAACATATTAAT
ATGAGATCTAGTTTCGAATATCTCGTCGCGATGGATTTAATGATGAAAACGGATCTTCAA
TCGAATTTTTCATTTAAGTGATAAAACATTTTTAAAAACTAGAAATCCAAAAAGATTCTC
ATATGCATGCATCAAGGTTTTAAATTGTAGGCTATTGGATTTAGCGCGTGGCTTTTTCAT
TGAGCTATTTGGGCCTATAGCTGGGCTATTTGAGGCTATAGCGGCAAGATTGTGAAGAAA
ACAAAATAGGTGTACACTGCAGAAACAACAATAGCGGCAGCTATAGGTGATAATAGTTGG
CAATTTAAAACCCTGACATGCATGCGGTGACGTGACACAATCTGGGTGTTATAAACGTGT
GGACTCTGACCATACATGTGGACGCTATGAGTGTCCATAAATAAAGAAATTTTATAACTA
CCAAAAATACGTATTTAAGGAATTTTTAACTCAAATCGTTGTTTCGATTGAAAAAACATC
TTTACTAAAAAATCCGTCTTGATAAAATCTTCAAAACTAAAAACCATGTTGATATGTTGT
GAGGACTTTTTTGGATCAAACAGTTACCACATTTGGGCTATGTAAATTAGCATGTTTGTC
ATAGATAAGTTACCATATCATTTACACAGGAGTTATCTGGTATGCTTTTCACAAACTTTT
ATCCTGAGGTCAAAATGTGATTATGGTGTTTGCAGTGAGTTATCAGCTTTGTTGTGTCTA
TTACCATGTTGCAGAAAAGTTATCGAGGTATGTTTTTCAACAATTTTCATTCCCTCGGTC
AAATAATTATGACGATATTTGTGTATGAGTTATCAACTCTCATGTGCATGTATTATCATG
TTGTTTACACATGATTTATTGGGAAGTATTTTTTAACAGCGTTTTTCTCTGGTCAAAAAG
TTACCTTGTTTGGATTGAGTAAGTTATCAGCTCCGTTATATGTATGTTACCATGTTATTT
ACACACAAGTTATCTGTGTATGTTTTTCAACAAACTTTTATCCCGGGATCAAAAGTTACC
ATGGAGTTTCTAGTGATTTATCAACTTCATTGTGTGTATAATACCGTATTGTTTGCACAG
TAAGTACCGGGAATTTGTTTTTAATAACTTCCGTTGTCGGAGAGGGCATTTTTCGTTTAA
GAATGCCACCGTTTGATCTCGTCTCAAACTAAAATTGCCATCAAAAGGGGTTCGTTTGCC
ACCCTTTAACAGGCGTTGATAGGATTTTCATAACTTCCTTATTCTAGAATATCGTACAAA
TTCATGAGATCTTTAGATGGATTTGGTCCGTCGCATGACACGTGTACAAAGTGGCTTCTT
CATCGCCTTGAAGAATGAATCCACCTCCATGAGGTCAAGGCGACGGCGATAGTCGGCGGC
GCCCACTCGAACTCGCGCATGAGGGTGGCCAACAAGCACTTCATGTTCATCATCGCCATG
CCCATGCCATGAAAGAACCTATGACCCGCACCAAATGGCATCATCTTGATCTACTTGGGC
CTGGCAAAGGGCTGACTCCCTCGCCGTCGCTGCATGGAAGGAACCGCTCCGGTCGGAACT
CGTCCGGATCCTTCCATATCTTTCTGTCCCAACCTATGTCACCCGTAGAAAAATTCATGT
AAAAGTCACCGACCAATGGCGGCAGAGCCATTCTTCCGACCAATGACGGCTTCGGCATGG
ACATCGCGAGGGATGACCGGCAACGGTGGGTGCATGCGGCGGGTCTCCAGCACGACGGCA
TGCATGTAAGGCATGCCTGCGCCTGCCCGGGATACCTCACCATCCTCGACCTCGCCATGG
AGCTTCTCCTGCATCCTCCTGCTTGTCTACAAGGTGGGCAAGGGCCCATTCCAGGCTTGC
CACCACCGTCCCCGTGCCGGCGTCGAGGAACTCCGAGATTAGGTGCACCATCTCGTCGTC
CCTTAGAGCACGTCGCCCATCGTCCTCGTCAGGGACGCCGAGGTTGACCAGCGAGTCGAT
GTATAGACGACGGCCGTCGTCGTCGCATGGTCGAGGATACCGAACACCCCGCCGATGTGC
CTCGATGGGAGGGAGGAACAACTCCTTGAGCCGGACATCGATGGCGACGAGCATGCACAG
CCGCCTCCACTCCACAAGCTTCTCCATCATGGGGCCCAAGGCCGAGAATGGCTTGACCAG
CCCAATGGCGATCTGGAACCTCTGTATGACGTCATGCGTGGCACCCATGTGGCCCTCGTC
GACGGTGTTGTCGAAGCACATGCGCGCGACGATCTAGAACACGACACCATAGAGGTGCTT
GTGCACCTCCGTCACCTCATAATTCAAAGATACTATTGTCATCAAACATTTCATGTGTTC
ATAATTCAAAGATTAATAATCTATGGAAATTACGAGGAACTCAACACACAGATCACCATT
CAACATGGGTTGACTTTCGGTCTGTCGAGTCTTCTTTGAAAACTCTGATCTCACGTGGTG
TATATGGTGGGCACTTCCTCTCTAATATATTTGACCGTCGGTGATGGTCGCTCCTCCCTT
CGTTTCCGAGTACATTGCACCAAAATGTCTAGCACACGGGAAAGAAGGAGGAATCGACCC
CCACGACAACACTTGGGATTCTTCCTCTCTGGTATGGTACGCACTCCCTCTTTGATATTT
CGACTGTCGGTGCTGGTCGCTTCCTCTACCTCTCTCGCGCATTATACCAAGGTATATAAT
GCGACAAGGAGGAAAGAAAGCGACCCCACGACAACAGTCGGGATTCTTTCTTCAAAAACA
GACTGAAGTCACATAAGGAGCTCCGTTAGACGGAAAGTCAACCCTAAGAATCAGTAAATT
ACCATTATATAAAAAATGGCCTATGTTTTGCCAGAATGTCATGTAATTCCCATTTCGGCA
AATCATGGGCAATTGATATGTCCTACTTTCTAGCAAAAGTTATGCCTAAATTTTGGCATA
ACCTTTGCTAAAAATAGTACATATCAAGCGCCTGAAATGTGCTAAAACTAAATGAATCAA
CATTTCGATAAACATAGGATAGTCGGAGGTGTTCCCCGCAAAATGATACTTCAAATGCCA
AATTTTCTCCGGTGACATTTTTTTTCTTCAGACTCCGGAATTCACTATATACATACTCCC
TCCGTCACGGTTTANAAGGCACGGTTAAATTTACGTGTATTTCCAGAATAGACAAGGTTT
AGAGTGTATTGCATTTAGTCTTAACTGCTAATTAGTAATTTGTTGTACTACTTTTATATG
CATGTGTAGTGTGAATGCTATTTTTGAGCCCCATCCCCGAGCCAATGAACAATCACCTAG
GTTCCAGAGAATTTCAAAACTTGCCTTCTTAACCGTGACGGAGGTAGTAGCAATATTATC
ACGACGAAGTAACCACTAAAGCAAAGCAATTTTTTCTTCAAACTCTGAAATAGCACATCA
TTCTATAATCCCTAGAGCAATAGCCATCATTTTATAAACCCTAGAGCAATAGCACATCAT
TATCCATCATGCATCAACCAATGAAATAGCATATCATTCTATAAACCTTAGAGCTATAGA
AATCAAATTCAAAATGCAATTGGAGATAAAGGATGCAATGCAAGAGGAAGGAGGGAGGGG
TATGAAGGAGTGGCGGCTACCTCTTGCCGATGGGGTCGTTGGGTGATACGTCTCCGTCGT
ATCTATAATTTTTGATTGTTTTATATATATTAATATAATAAAACTTTCTTATATTTTTGA
CAAAAAATTAATCAGATATGTTTAATCAAATCGACCCAACCATAAAGGTAGGAAACTAGC
GCATGATCCTCGTGTAGTCACCATCTTCTTCATAAAAAACACATACACTTTTATCTTGTA
AGTGGTAGCATATCGTAGTCTGTTAACGAGCACTCACAAGTTTAACAATTTTCAAATAAA
CAGAGCCGAACAATGTTTTCAGCTCGTTAAGCTTAACGAGCCGAGCAGCTCGTCATCCAT
TCCAACACAATCTTTTTATTTTATCTACACATATCGTACATATTCACAAGATCTTTAGAT
GGATTTGGTGCGTCGCGTGACACGAGCGGAAAGCGGCTTCTTCATCACCTTGAAGAATGA
ATCCAGCTCCGTCAGATCCACGGTGCCGGTGCCAGTCGGCGGCGCCCACTCGAACTCGCG
CACCAGCACTGCCAAGAAGCACTTCATGTTCACCATGGCCATGCCCACTCCAGGGCAGAA
CCTATGCCCGACGCCGAATGGCATCATCCTGATCTGTTTGGGCCCCGGCAAAGGCCCGAT
TCCCTCCCCGTCGCCGCCGGGAAGGAACCGCTCTGGCCGGAACTCGTCCGGATCCGACCA
TATCTTGCTGTCCCTACCAATGTCCCCCGCAGAAAAATTCACGTAAATGTCGCCGGCCGG
CGGCGGCACGGCCATTCCTCCGGCAAGCACCTCGACAGCATCGGCATGGACGTGGCGCGG
GATGACCGGCAACGGTGGGTGCATGCGGAGCGCCTCCAGCACGACGGCATGCAGGTAAGG
CATGCCTGTCCCTACACGGGATACCTCGCCGTCGTCGACCTCGTCGCGGAGCTTCTCCTG
CACCTCCGGCTTGTCGACAAGGTGGGCGAGGGCCCATTCGAGGGTTGCCACCGCCGTCCC
CGTGCCGGCGCCGAGGAACTCCGAGATTAGGTGCACCATCTCGTCGTCCCGTAGAGCACG
CCGCCCACCGTCCTCGTCAGGGATGCGGAGGTCGACCAGCGAGTCGACGTACGGACGACG
GCCGTCGTCGTCGCGTGGTCGAGATGGAGACGGAGCACCTCGCCGCCGTGCCTCGATGGG
AGGGAGGAACAGCTCCTTGAGCCGGACATCGATGGCGAAGAGCCTGCGCAGCCGCCTCCA
CTCCACGAGCTTCTCCATCACGGAGCCCATGGCCGAGAAGGGCTTGACCAGCCCAATGGC
GATCTGGAACCGCTGTATGACGTGCCGCATGGCGCGCACGTGGGCCTCGTCGACGGCGTC
GCCGAAGCACAGGCGCGCGACGACGGAGAACACGGCGCCGTAGAGGTGCTGGTGCACCTC
CGCCACCTCCTCCCGGCTTCCCCGGGGCGCGGACGGCAGGGCGGCGACGAGGCCCCGGAC
GGCCTCCCGCTGCAGCGGCGCGAGGCCGCCGAGGCGCGACGGGTGGAGGGTCTCGGCGGT
GAGGTTGCACCGGAGGGCGCGCCAGTGCGGGCCGTGCGCCA