morexGenes - Barley RNA-seq Database

Contig contig_367099

Source Contig contig_367099

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_367099 (3623 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_367099

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_50862	1	147 bp	None	Available	Available	None
MLOC_50863	2	2763 bp	MLOC_50863.2	Available	Available	LOC_Os02g51140.2, FRAME:-2, EVALUE:8e-32, 13102.m05812 protein N-rich protein, putative, expressed

CDS Structure of MLOC_50862

CDS Structure of MLOC_50863

Contig Sequence (3623 bp)

>contig_367099 3623 assembly3_WGSMorex_rbca.fasta
TAGCTTTGCGAGGCTAAAACATCCCACACTAAATGGATAGAAGATATTAAAAGAACAAGA
TCACCGCAGATTTTGGCGAACACAAAATGTAACAATGAAAATTAATCAACATGGGATATA
AGAGAAATTAGAATTCCACGGCAAACGCAGGGTGTGTTTGGATGGTGACCAAAACCAAAC
ATACCAACCTTTTTGGTCATAGCCAAAGTTTTGGCTCTTTCTTGGATGGTTGCCAAATAT
TTTGGAATGCCCAAGTGCTCTAGTCAACTCTAGTTCAATTTTTTTTTTGCCAAGATTGGC
CAAAACATGGGCAACCAAATTTTTGGTGATGCTGGACTCAAACCAAGCACACCCATAGCT
CTATTATAGAGATCTGTGCATAATATTGCTTTCGCATGGGATTCGTTATAGATGATCAGT
AGTGTTTGCATACACATGTTCCAATACCATTTTACTCACTGTCTCCACACAATTAATTTT
CGCCGCCAACCAGTGCTCATCATTAATAAGTTTTGCTAGGTATATCATCACAAACATGGG
TGTAAGCGTGTAACGTCATCCACTGATTATTCTTCCAAAGGTCAGAGAAGCTATTGAACT
AATTACCAAAAAAGATTAGGCCAGAAACTCAAAGACAAATAGCTACTTCTTTCTACTTAG
CCTGAGATCATCATTAATACGGTTACCATGTAAAGTGCAAACGAATACCTTTTTAACAGA
AATCAACACATTTTGAAGGGAACAAATGGTTTACTTTGCCCCTAGTGATTAAAAATAGTT
CAGGACACGTGGCATTCTCTCACAAAAAGATCATGTGTGTTTCCTAACTTGATCAGGGGT
GTCCTATCTACCATCATTTATGAAGACTTCCTGCTCACCCTTTGCCACATAACATCATGT
ACGCTAGGATGCGCTACAATATACCGCGACCTTTGCACCCTCTGCAACTCTAGCAAAGAC
TTCCTGGCACAACATACGACAACTCCCACATGATCAATGCTACGTCGCCGTGGACATTTA
ATGAGTGAGGAAACTAAAATGAGAATTGGTACTCACAAGTAACCGTTTTGATTCGTTATG
AAAAAATTAAAGCACAAGCCTTGTAAGAAAATAAATTTAGCTAAAATAACTATGTTAAGT
TTAATAATGAGGTAGAAGTTTCCAAGTGAGACACACAGAATGTCGTTTTCTCTCCAATAA
GCATGCACGCATATCCAAACTTCAAGCTTGCATGCCATCAGAATCAACATGAATTTCAAC
ACATCACTAATGAGCCTTTTAAAGGATCAGTCAAAAAGCCCTGTCAGGCTATTGTCTGCG
GTATTAACTTGTGCGGCCTTTGACATACCCTAACCATACGATATAGCACATAATACCTTC
AGGACAGGTTGTATGATAATACTAGTTAATAGCAAACGGGATACTTCTACTACCATAAGA
ATGAACCATAAACACACAAACAATGACCAAGAATTACCTGAGCAGGGAATTTCCCATTGA
AAGCACGTCGCACAAGATCCATCCCTCCTTTTGCCGTTGCCTTGTACACCCCATAGAGAA
GCTTCAGATCAAAGTCATACAGGAACAGCTTCGCCCCTGGTCGGATCTTCTCCACCACAT
CTATCTTCCCCTTGGGCAACCCAAACACGCTGTTCTGGAAGCACTCCGGCTTGGTCTTTG
CGCTGCACATGAAGATAAACCCAGCGCTGCCCCTCTCATCCCCCGCTATGCCGTCCTTCT
TGTCCTTCTCCTCCCCCCTCGCATTCATCCTCCCTTGTCCTTCCCCCTTCATCTTCCCCT
GTCCTTCCCCATTAACCCTCCCTTTCATCTTATCCTTCCTGCCCCTCTTCCTGTCAGCAC
TGTTGTTCCCAGTGCCCATCTTCCTGTCAGCACTGTTGTTCCCGGCGACGGTCTTCCTGT
CAGCACCCTTGTCCTCGGCGACGGTCTTCCTGTCAGCACCCTTGTTCTCGGCGACGGTCT
TACTGCCATCACCCTTGTTCTCGCCGACGGTCTTACTGCCATCACCCTTGTTCTCGGCGA
CCGACTTACTGCCATCACCGTTGTTCTCGGCGACGGACTTACTGCCATCACCCTTGTCCT
TGGCGATGGTCTCATCGCCATCACCGTTGGTCTTGGCGACCATCTTCCCATCAGCCCCGC
CGTTCTCGGCGACCACAAGGGCGGCCGAAGTGTTGGCGTCGGCCGGAGCGGGAACCACCA
GCGTAGGCACCGAAGCAGGAACCACAGGCGTAGGGCCGGAAGCAGGTGCGTCGGCGGAGG
CCGCGACTTGAGCCGCGGCGGCCGCCTTTTGCTTCTCCGGATCGGCCTTGGCCTTCTTCT
TCTTAAACAACTTCTTGCGCCTGGCCGATCCGGGGGTGGACTTGGACGGCAGCGTCGGCG
CGGAGGCGGAGGCGGAGGCGGACGCGGCGCCCTTGCCCTTGCCCTTGGCGCTCGGGGTGG
TGGGCGCCTCCTTCACCATGGCTGATTGGAGCGGGCAGATCACGGAAAAATTGCCACGAA
AATTTAGGAAAAACTGCGCTGAATCTACTCGCGAAAATCGAACTGAAGTGCGCTGAATCT
ACTCGTAAAGATCGAACTGAGCACGGGCGCGGGCTAGGGCAATCGCTCGGCTCGATCTCA
TCGGCCGGTAGGGCGTGCGGCTCGCTACGATGCAGGGAGAATTGAGGAAGTAGTAACTGA
AATCCAGGGTCCGGATGACGAAGGTGAGGAGGGGGTGCGCGTACCTTCGGTAGCGAGAGA
AAGGGGAAGACTGTCAGGGGGATGTGACGGCGCGCCTCTGGTATGGTGTGGCCTCCGCTG
CGTCAAGGGTTAGGGTGGTTTTATAGGAGTAAGTAGAGAGACAGGCAGAGGCAGGGGAGT
CGATGGGTATCGGGTCCGGCGCGGACCCCAAATTCTACGACGGTCTGCGCTTTTCGACCC
TACCGCAGCCGGCTCGACCGAGGATCGAACGCCGTGGAGGAAATATAGGCAGCGTTTCTT
CTGGTCAATTTTATGCCCGATTGGGTAAACGTACCCACAGACACACATTCGTCCTAAAAG
CACGTCTCGTTCTCTTGTGGCAAGGAGCCAGGACATGTGAAGTTGTGGATCCTTATGCTA
TTGCGATTTAACAACCTTTTATGCAGTATGTATTCAACAATCAAATGGATTTACAAGGGA
AATATCATGGAATCCACTCCCACAGCTTAACACATGGCGACGCCTTGTTCTTGACGTTAT
GAATTTATAAGGAAAATATCATGGAATCCTCACTCCTACGTCTTAAACATGACGACGCAT
TGTTTTGAATGTTTGTTAGCGGTGCGCGGGCTTCTTTTTGTGAGTTTTAATGAGGATAAA
CGCTTTAATGAAGACGGTTGTCTACGAAAAATGGTGTTTTTCTGTGTAGCGTCGTTACTC
CTCATGAGCCTTAAATATGTGTACATAGTGTGCAAGCATCGTTTCTTTATTCTCGAGCTT
TGTTGAGGACGATTTAGATTGACCGGTTACCGATGAAAAAAGTTGTCTTTACTTGTCGTG
CCTCCGTTGCTCTTACTTCTTTAGTTTAGACTGTGTATTGGCGATCGAATATACGGGATT
TTGTTTAGAAGTTTTGTTTAGAA