Map Locations of contig_366950 (8731 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_366950

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50841 1 217 bp MLOC_50841.1 Available Available None
MLOC_50842 2 1480 bp AK356610 Available Available None





CDS Structure of MLOC_50841






CDS Structure of MLOC_50842






Contig Sequence (8731 bp)

>contig_366950 8731 assembly3_WGSMorex_rbca.fasta
ACTACATCAACCGTGTTCTTGAATGCCTCCTCTTAGCGATCTACAAGGGTATGTAGATTT
AATCTCTCCTCTCGTAGATGGCCATAACCATGGATAGATCGTGTTTGCACGTAGGAAAAT
GTTTGTTCCCCATGCAACATTTCCCAACAACCTACCCCCCAAATCAGCCATCATTGCTCG
AGAAAGATCAACACCGACAGAATCTCATGAAATCATGGGGACACAACTTCATACGCCCTC
TGATAACGCTAGACGTACCATTGGGACGAGGACCAAACCTGCAAGACATTATTCCTATTG
AATGGCATCGCCGCAATCACACAACCTCAACCAAAACGCTAAACCTAACAAGAGCGAGAG
CAGGGTCCCTCTGTCGATGGGGGGCCAAGGTCCTCTACACCTCCACTAATCAAAGGTTAT
TGGAGGCAGAGCGGACCGACAAAGACGCTGGTGGGAAGCGGATAAAAAACAATAATCTAG
GTGTCTTTTCATGGGGAGCAAAACTAGGATGACATGTTCGCTTGAATCCTATAGAATTAG
CAAACTACGTGAATTTGGACTAGATGGTGTTTGATGATATAGGAAAGACAACTAATTATG
AAAAAAGAATGTTTGAGCAAATGGAAAATATCCTCCAAAATAGAACGCAAAGTAATCCTT
TGAATTTTTTTTCCTAAGGATTATAATACTGCGAAACAACCATCATTATATATATAGAGA
GAGAGAGATAAAAACAATTCTAAGAATACACATCCTACAAAATTTCTACTCCCTTCGTTC
CATCTTGTAGGCTTGTTTTCTGAAAGCCAAATATGTATACGTTGGACAAAGCTTATAGGA
TAAATTATCGACATCTAAAATACAAAATAAATACTGAAATATAGAAGTATAATTCATTAT
AAACCTAACGATAATGATTTTTTTGTATTGTGAATATTGATATGTTATTCATTTATGCGT
TTATTATTATTTTCCCTCTTTCCTCTTACACAAGAAAAGATCACAAGCTTTTCTCCTCCT
ATTGGTGCCGTCGCCGCTCCATCTCATCTCTGCTGACCTTTGACACATGAAGGTGTAGAG
GACTTCGGTCCCTCGTCATCGGGAGGGACCCGTTTTCGTTCTTGTTAGGTTACGCGTCTT
GGTTGGGGCTATGTGGCGGTGGCGATGTCCCTAATAGGAATAATGTCTCTCACGATTCTA
TCCCCATCTCAGGGCATTTGGAGTTGTGTATCCATCGGATCTCGCGAGGTTCGATCAGTC
CTGGTCTTCGTTGGGTCTATTTGGATTTGATCTTTGTTCGTCTTCATTTGTGTGTTTACA
TATTTGATCCTTTTGATCTACGATTTTGTTTTCATCGGTGATGGTTGTTCTTCTGGTACG
CTGGTCCTTTGGGGCCTTAACACGACGACTTTCAGACTGTCTATTACAATAAGTTTGCCC
GACTTTGACGATGGCGGCATGCCTTCGGTTCGCTCCGGTGCTTGTATTCGTCATGGACCT
TGATGTATTTTTTATTACTTCTAGTATTTTTTGTACTTCCATGGTTGAATAGATAGGAAG
TTTCTAAAAAAAATGAATATTGATATTTTTTTTAACTCTTTTTTTTTTGCAATGTTGATA
TTTTTTAACTTGGTCAAACATATACATGCTTGACTTTCAAAAACAAAATACTAATTATAC
CGTGGAACAGAGAGCGAGTACGGAGTATATTTTTTTACAATATAGTATCAAAATACCCAT
TATACCGTGAGACAAAGGGAGTAGTATTTTTTTTAATTAAAAGGAGGGAGGTCGGTGTCG
TGAGAGGAACCGGCGTCGGGTCGGGGCCCGACTGGAACACCCACCGGCCCACGGATTCCC
AACGCTAGCGCCGCCACCCCTCCCTCAATAAATCCAGCCGGACCCGAGCCGCAGAGACAC
CAGACACCCACCCGAGGAGAAAAAGAAAGGATTTTTCGTTTCGTCTTCGCCTGCTTCCGC
TCCCTGCTTCGTCGTCCTCACGCGACCAGCTTGACTCCCTCCCCCCCGCACGCGCGAGCA
GCAGGGGAGGGCGAGAAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACC
CTCGAGGTCGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAAATTCAGGTGCGCCGC
CGCCGCCCCCTCCCGACCCTTTCTAGGTCTGCCCGCTGATTGGTTTGGTCCGAGTAAATC
GTTGATGCGTGCTGCCCCTATCCCGTCCGGGGCCCATCCGCGCTGCTAGGTCTGCCCTGG
TTTTCTAGATGGCGTGCTGTTTCTGCGCATGTTTGTTAGGATTTCAGCTTTGCGCTGCGT
TTATTCGGGCATGTCCCCGGAGTTATGTTCGGGTTTCTTGGCAAGGATATTATCTGGTCA
AGTTTGGATTGCTCGAACTAGGGCGATCATGCTGGGAAGTTTTAGCATTCTCTGTAGGCT
TTCTTTTGTGGGGCTGCGCCTAAAGTTGTATCCAAGGGTTCACCCCTTTCTTCTGTGTCA
AATAAAATTAAACAAATCCCTTTTGGTGTGCAAAATTAGAACAATTAAGGTAGTTCCTCC
ATTTGAACTTTAGACTCATGCAGTAGACGAGTTGTATACAAATTCTATCATTGTGCTGTA
TAGTGGGTATCTGATTCGGTAACAAATTACCAAAAGGAATACAATCCATGCTTTATTGCG
ACACATGGATATCTCACTTGATATCTTGTGCCAGTGCTGCTCCCTGTGATAGAGTGAGAA
TATATCCAAGAATGCCTTTATTTTGTTCCTTCAGAAACTGATGAGTTCACTGCCTTTATG
CGTTTCATTCTTGTAGTGAAGGTACCTATGATCTGTTTCAAATCAGGCATCCATCAATTA
TGCTTTTCACTGTTGTAGTTGTTATAGTGAAGGTAGCTATCTTCTGTTTCAAATCACACG
TCCATAAAATAATTCTTATGACAAGAATATCATTCTTCTCCAGTGAATACATTCTTGTCA
TGTCTATTACCGTTGTGACCAGAATCCAGAAAATAATCCTGTATTTCCAACTTCCTTTTC
TTCACTTAACATTGTAAAGACAGCTACTGCATTGGTTAAGTTGGCAGGCTAGACTACCTC
AAGGAGTGAAACTGAACTAAATCGCTATTTTGTTCACTGTCACAGGACAAGGAAGGGATT
CCTCCGGACCAGCAGCGTTTGATATTTGCTGGCAAGCAGTTGGAGGATGGACGCACACTT
GCTGACTACAACATTCAGAAGGAGTCGACTCTTCACTTGGTCCTCAGGCTCAGGGGTGGT
ACGATGATCAAAGTCAAGACTCTCACTGGGAAGGAGATTGAAATTGACATTGAGCCCACC
GACACGATTGACAGGATCAAGGAGCGTGTTGAGGAGAAAGAAGGCATTCCCCCTGTGCAG
CAAAGGTATACAGGGCCTGAATTTCTTTTGATCTTTCTACGCGCATTATATGTATATATG
TTCTTGTCGAATGAACTCCTCTTCTATCCATCATATCTGTAACAATGGTGAGGGATACTT
TGTGGTATCTTGTATTTGGATGGCCCAGACTAACGATGTAATTATTTTCTGCTTGCAGGC
TGATTTATGCTGGCAAGCAGCTTGCAGATGACAAGACTGCCAAGGACTACAACATCGAAG
GTGGCTCGGTCCTCCATCTTGTCCTTGCCCTGAGGGGTGGTTACTAGTTAAGCTGTAATG
GAAACACTTGCGTCCTGAGAGAAGTGACCATTGGTGGCATGGAACCTGTGTTGCAAAGAG
ATAATAACAAACTAGCTTTGCTTAGTGGGAGGGGCTGTCTTCCATGTTATCTGCCCATAT
GATTTGACAAAACTACTTGCAAGTTTGTTTGCCTCTGTTATTAGCTCTGTTGCGTAGTAA
GATCCATATATCATCTGAACTTTGGGTTGTGTTTCGTCACTCTTTCCTGAATTCAAGATT
GCAAGTTTCATTTTTAGGTCTAAATGAAGAAAGGTTGATCGGAAAATAACAATGTTCATG
TGACACTGGTTCTCGCTGAATCTTGAATACATTGTGATCTGAGATGGCTGAATCAGTGAT
GGTTTAAAAGCCACTTGGCTAACATCCACCTCAAATGAAAAATATACTCCTGCATTCATT
GCAAGCCATGTTCTTTTTATCCTGTAATCTTATAGTATTCTGCTCTAGACGCCAGAACGT
GTGTTTCAGAGAAGAACCAACCCTACTAGATTTTTCCTCTAGTTAAGATACACTGGTAAC
CATACAGAAAGCAGCATATTGACCTGCTTACACTCCCCCCCTCACATATTGTCTCTTCGT
TGACCAGAACAAGAAGCAAACAAAAAAGAAGAGCATCAACTGATAACCTCTCTTTCCTGT
ACAAACCTAACCCAAAGCTTTCCTGTACAAACCTAACCCAAAGCTAAAACTAAAACGAAG
AGGTCCGGGGAGAAAGGAGTAAGGCCTATGAAACAGAATACCTTCCTTTTTTTTTTGTTT
TGCACAGAGTTGTATCACCACGATTTGATGTCGTTGAAACCATCCCACGAGACAAAATGC
AAATAACATACTTCCTCCTTTCCTAAATACTATATGTCTGTTATAAAAAATAAATACTAT
ATAGGTCTATTTAAAGACTTCACTACAAACTACATACAGAACAAAATGAATGAATCTACA
TTCTAAAATATGTTTATATATATATATATATGTATGTAGTCTGTAATTGATTTTTTTAAA
CTTATATTTACGGACATAGTGAGTATTATTTTTTGAGGGCTACCAACTTTGTAGAATTGT
TGCATAAAGGACGGACAAGGGCCACAATTGGGCCATATGTGCTTTTCCAGACGGTCCGCA
GACAAAGTTGTACATAACTCCGAAAATATTGCCCCGCAAGAAATAAGGATCGATTGTTCG
AATTTCTCAAGACCTTGAAGAATGGACGCCCCCTTTATTACTATTTATGGAATCACTTTA
TAAGATGTAAACAGTAATGTTAAAATCTGACGTCAGATATTAAGCATGGCAAATCAAACT
TTTTCATGATAATTTATGTTTGACACGGAGATGAGAAATTTAGTTTGCAAGCGCAATAAT
TTCCTGGCAAGAGAAAATTTGAACCGAGTCAAATTTGCCATCATCGGCAAGCATAAATTG
CCATGAAGACTTTCAATTTCTCATGGTAAAAATCTGATGTCAGATTGATAGTCGAGTCCA
ATGTAAAAAAGGTAATTAGTCTCGTTTACCTTTCTTTGAGCCTTACTGTTCTCGTTGAAA
AAAAATAGCAGATGCACTCCTCGGAAATCAAATTTGGCTCATGGGAGCATTTGCTTCTGC
ATGCGAAAAATAATTTTTGAAATGTCAAAAAAGTCCAACAATTTTTTATGTATTTATAGC
CACATTCAAATGCTACCTGCAAATTTTTAGGCAAAAAGGTTATACATTTTGGACTGTATA
AAAATAACAAATATAAACATCAAATTTTACCATCACCCTAAATTTATTTTTATATCGATG
AAATACTACTGCTCTGTTTCGCATGAAAATTGGCAAGCATGCTTGCGGCAGTAACATGCA
CATCCAATAAAAATAATTTTTTTAGAAAATGTTTTACCACTTTTTTACGGTATTGTTCAT
CCGGAAACAAATGCTTCGAGGAGCGCACTCCTCGTCTACTCAGACCGGTCACTAGCCTGC
CTGAGCCTAGCCCAACCCAACAACCAAGCCCACCCACCCATTGGCCCCACAAGTCGCGAC
TTCGAAGGGCGTAGGCGGAAAAACTCTGAAAACCGACCAGATCGCCACTCTCCTGCCCAT
CCCCCACCTCCACTGTCATGTCTTTCCCATCACAAGTGGATAAGTGTGAGGTGTTGATCC
ACATTGAAGATGTTGAGGCCCAATATCGAGAAGCATTTGTGCCAAACCTTCCTTGCAAAT
ACGCATTGAATGAATATGTGATCCACCGAGTCCACCTCTTGAAGGCAAAAGTAGCATGGG
GAGGGGTTATCTTGCAAGCCATGACGAGCACGTCCGTCGGATGTCCAAATCTTGTATTGG
ACCGCTAACCAAGCAAAGATTTTGCATTTGAGAATGTTGTACAATTGCGTTTTACGGGGT
TTTATGGTTACCCGAATTGGAATGAGCGTAATCTTTCTGTGATGATATTCACAATCTGTA
TAATAAAGGTGACCATCCCGTGTAGTTTTGAAAGACTTTAATGAAATAGTATTGTCTTCG
GAAAAAGAGGGAGGGAACGTGAGGCCTAATGTAATGATGAGAGAATTTCAAAATTGCCTA
GGAGAATGCGGATTAGAAGATATGTGATATATAAGTTGATCCCGTCACTTGGAGAAGAGG
TGATATCAGGGAGAGACTTGATCATGGTGTTTGTAATGTGAAGTGGGCGAATAAATTTCC
CCGGGCTGCAATCATAAACTAAGAACACATTCATTCTGATCATCGACCTCTCGTTTGGAT
ACTGAATACTACGAGGGAAACATGTTTAATCAACCTGTAAGACGAGTGAAACAATTTGAA
ACTCGTTGGCTGAAAGAAGAGACAGTAGTAGAAATTGTATGTACAAGGTGGGAAAAGGCA
AAAATGTTGGGCAATGGACTGTCTATTGCCGAGAGTACAAGGACGCTGCATGCGGATTTG
CATACATGAGACCGTGATGTACCCAGTGGGGCGAAAAGAAGAATTAAGAACTCAAAAAAG
ATATAGAAAAATTGCAAAGGGCCCTATGAATGCGAAAACTCAAGAGCGACGAAAGGATAT
CCTAGTACTTATTGAAAACCTTTTGGAACAAGAAGAAATATACTAGTTACAATGGGTCGT
GCAAACTGACTATTACATGGTGATCGTAACGCATTTTTTCCATAATGCGGCAACGACTAG
AAAGAAGAGAAACTAGATTAAAAAATTGATGGATGAGAAGGGTGTTTGGGTACAAGACAC
GTAGATGAAAAATCATATTTTGGGGTGTCTTTCAAATCTTTTGAACTCAGAAGTTGTACA
ACCAAATCCGGAGTTTATATCTCTTGTAAAAAGAAAGTGACTGGTGAAATGAATAATGAT
CTTCTAGCCCCTTATACATAAGCGGATGTGCGAAAGGCACTTTTTGATATTGGAGATTTA
AAAGCACTAGGTTCGGATGGCCTGCATGATGTTTTCTATAAAAGGTTTTGGTCTATGTTA
GGGGATGACCTGACTAAAGAGGTACTTCACGCGGTAAACACTTGCTCTATACTTGATGGT
TGGAATGATACTGCAATAGTTATGATCCCAAAGGCTAATTCTTCAGAAAAGGTTACTCGG
TTCAGACCTATAAGTCTGTGCAATGTGGTTTACAAAGTAATCTAAAAAATGATTGCAACA
CGTTGAAGATAATCCTTCTAGAAATTATCAGCACGACCCTGAGTGCGTTTGTGCCCGGAC
GTATGATTACTAACAATATTCTAGTGGCATATGAGTGTTTCCATACAATAAAGAAAAAAC
AAGAATGGTAAAGAGGGCCTATGCGCTATAAAATTGGACATGCACATAGCGTATGACCGA
GTAGAGTGGCCTTTTCTGAAGGAGATTCTGCTCAAACTGGTATTCAAAGAGAACTGAGTA
GATCTGATTATGCAATGTGTATCCTTTGTGGAATACCGGATTCGTTTTAATATGGACTAA
ACAAAGAGTTTTAAACCCGTTAGAGGATTGAGGCACGACGATCCTCTCTCTCCTTACCTA
TTTTTATTATGTACGAAGGGACCGACTGCTCTTTTAGCAAACGCAGAGGAGAATGGAAAC
ATCTTTGGAATAAAGGTCAGTAAAGATGCACCCTCGGTTTCAAACCTTCTCTTCGTAGAT
GATTCCTAGATTCTTATGAAAACAAATGCTATGAATGTAGAGGCTTTGAAACCAGTCTTG
AATTCTTACTATGCCTCATCGGGGCAAAGGGTAAGTGTTGAAAAGTCTAGTATTTTCTTT
AACCCTAGTACAAAGGTGGAAGACAAGGTGTAAATTTGTACAATTCTCAATATTATGACT
GAAGCACTCAATGATAAATATTTGGGTTTGCCTGCAACTGTGGGTATGGATAAAATCGAT
TGTTTCCAATTATTGATCAATCGAGTTATCATGAAAATTAGTGGATTGAAATAAAAATTG
TTATCTGGTGACGGAAAGGAAATATTGCTCAAATCTGTTGTATAAGCTATCCCATCTCTA
TGCCATGTCCGTCTTTAAAATTCCTAAAGAAAATAGAAAGGAATCATTGACGCGATGTCA
TAATTTTGTTGGGGTGACGAGGACAACAAGAAGAGAATGCATTAGATGGCATGATGAAAG
ATGTGTGTACCAAAAAATCAAGGAGGTATGGTTTTTCGAGACATACATTGTTTCAATCTG
GCGTTGTTAGCCAAACAGGCATGGCGCCTGATTGATAATCCCGAGTCCTTATGCGCGTCT
ATTGTAAGAGCTAAATATTTTGGGAAGGGGATTTAATGAATGCAAAATCAAGAAAGGGCT
CCTCTTTCACTTGGCAAAGTATCATGGAGGGAGTAAACTCGCTAAAAAATGGTTATATCT
GACGGGTTGGATATGGACAAAGTATTTGTTGGAAATATGCCCTAGAGGCAATAATAAATT
TTTTATTATTATAATTCCTTGTTCATGATAATCATTTATTATCCATGCTATAATTTTGTT
GATTAGAAACTCAAATACGTGTGTGGATACA