| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_366432
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_50792 |
1 |
435 bp |
AK376138 |
Not available |
Available |
None |
CDS Structure of MLOC_50792
Contig Sequence (5002 bp)
>contig_366432 5002 assembly3_WGSMorex_rbca.fasta
GAAGGCGAGCGCGGTGCGCGCGCCCGAGTCGAAGACGACGCCGCCGGCGTCGACGCCGTT
GTCGCGGAGGATGGCGGCGAGCATGCGGCCGAACTCGTCGTCGCCGAGCTTGCCGACAAA
GGCGGCCTCGCCGCCGAGCCGCGCGACCGCGATGGAGACGTTGGCCGGCGCGCCCCCGGG
GGCCTTGAGGAAGGCCGGTGCCTCCGCCAGCGACACCCCCGCCACCGTCGGCACGAAGTC
CACCAGCATCTCCCCGAAGCTGACCACCAGCCCGCCCCCGCCCGCCATTTCTCTCAGGAC
ACACGGACGGAGACAGGGAGAGAAAGGGAAGGAAACGGGGGGTGATGTGTGCGCGCCGCG
CTGGGACGGAGACAAAGACGTCCACCCAAAGTCACCTGACTTGAAGACCACAATGGTCGA
CTCTTCTATTCCCACATGCTTCATTTATGCCTCTCTTATTTTTTTTTGAAACGAAGGCAA
AAGCATTGCCTCATTTTATTAATAAAAAAAAAGAAAATTACTCGGTTAATTAATGAAAAA
TCGAACGAAAACCGTACAACTCGTCCATACAGGATTCACGAGACGACCTGACAACCCACA
GAAGAACGCATACACGTCGTCAAGAAGAGAACATCATCGAGTTGCAACATGGTGTCATCG
TCATCACACCTTCATAAGGACGACTCCGACTTTAACATTAACGACCATCGATGTAGCCCT
CACCGAAAGCAAACATCAATGCCTACGTCGATGCCAAACTGCCAACCGCATGCGTCGTCA
CCCAACTCACTTCGGATCTTTGGCTTTCGCCTGATGGTACAGTATTGAACCAAGCACAAT
CAAATCAATATTTCTACAAAAGAACGTTACCACATGAATAATGTTAGTTTAGCAGAGAAT
CAAAGGGACAACATCAATATAAGTGATATTTACTAATAAATCAATCGATTAGCTTGAAAA
CAATCAATCACAAGAACACCTTTAAGTATAAATGATCCAGAGTGAGTAGAATGATCCCTT
ATGCATCAAACAAAAAGTCAAATTGCATAAATATTGTTGGGCTGCTATGATTCTATATTA
GTCATCAAACATCTTATAAAGGTAGGCATTATCTCATTCAACGATAAATCAGACGAAGTT
ATAAAAAGGAGTACAACGTGAATCACTATTGAACCATTAAGTGTCTTGAGCACCTTGATT
ATTATTTTAAGCATGTTTCATTTGGATCAATATAGAATGTTTAAAAATCATTTATACTCT
ACAAGAAATAGGTGATTTAGCACTTTAGGTTTTTGGCAGAAAACTAAATTCCAAAACTGC
ATGAATAAGCATGCCCTGGGAAGGTAATATATGACTACAAATAGGTCACATAAATTGAAG
GTCGTGTGAACAAATCATTTTTCATCCATTATGGGGAAGTGCTTCTGATTAATATATGCA
ACATCCTGTATGAAATTAGTTTCTAATTTGTTGCTAGCTTCATCACAAGATTAACAACAT
CATCTATGATAATGCATAATGTTATGCAAAACATAGAGTTTGTTTTCTATGTGATGTTCA
TAACTTCCATCTTAACCTTAGTGCATCCGAGTTAGTGTTCCAAAAAAAATTGAGAGAAGT
GCTTCATTATTATAAGCTACTAACTTGTTTTCCCATCTTGGTTAGACATTTGTGACTAAT
CCTTCATTAATCTAGTTACTAACTCAATTGCTTCATCCCAATCGTCCTCTATTGTTGGAT
TTTTTGTGGTACCAAATTTGCTCTCTTGATTTGTTCTCGTCCATCAATTGCTTCATGGGA
TGTAAACACATGGTTTCTTTTGGTTTCGTTCTTTTATAGATTCGAGGTATCCTATCTACA
CATGCCCGATTTGCTGAAACTTGATGGGGCTTGCAATAAAAATATGGTTACAACATTTGG
AATTTTCTGTTAACTTGTTATCAGTAGCATAAGGGAAGGAAATGGTTTTCAAGTTTCACG
CAGTAGACCGAGGGGAGTGGGATTGCCTAGAGTTTGGAGAAGAACACTATTTTTTGGTGT
TTGAAGCTATACCGACTTTATGTTGGGTTGATGCCTAGTGAGTGGATATGTTATTGTGGC
ATGTGATTTAGTTTGGGAATGATAAATGTTGTGGAGTAGTTGGTACTTCATAATAAACTT
AAATACACAACTAGCTCCCTCCTTGTGTATGTATAACACTTTTCCATGTAGTCTGGTAAT
GAACAATATGAGTCCACCCATGTTCTGGCAATAGATGGAACCACCACACTTGTGGAGAGT
GTGTCTAGAAACTTCATTTGCTTAGGGATGGGAGGTACAAGGAAAGATGCTAGCTGGCCA
AAATGGGAAAAGAGCATATAGCCCAGATTATTTTTCGATCTTCTAAGAATTTTGAAGCAT
GTCCACGAATTGCATGATCTAGAGAAACAATAAGGATCAAAATAGTCCATTATATTATGG
ATGTGACTACTGAATGCACCGTATTGCCGTACTCACTTGTCCGATGTTATTGTTATGTAT
GGGTTTTACATAATTCTTACATACTAGTTCAATCTGATGACTATTATTTCCATGTTTCGC
TCCACGCAGTTAATCATCCTCTCGCAGTTCGTAAATATTTCATAGGAATATGATTTCTCT
GCTCCTAATAAATGTGCATAACGTATAACTTCATGTTTGTCAAAAAACATGTAACTTCCT
CAGAAAGTAGATGAAGTGCATTGCACCTATGCCTCGTAACTCATGTGCTATTTTTTCGTT
GTCCTGTTAGAAACAATTCTTTCCAAAGGGATTTAAATGATCTGATTTGCTGAGATCGTC
AAGAAGAGTTATATTCTAATGGTCGTAGATATTCAGAATTAGCTAGTGTTTTAGGTGTGG
TCCAATTCAAGCAGCTACCTGTATGCACAAAAGCCCAACTAAACGAGCCCATAATTAGGC
CATCGTGGCTCCTGCCCATGACGTAGTGCCGCACGTCTTCTCGGGTGGATCGGCTGGGGA
GCTCCTACCTGCCGCATTCTGCGGCAGGGAGTCCTTCTGTTGCACAGGGCTATCGCCCGA
TTGGCCGGCCCAGTTCCTTTTTTTTGCTTTTCTTCTATTCTGCTTATTTCCTTTTTTTTA
ATCTTTTGGTTCGTTTTTCTTTCTTTTTTTATTTTTATCATTTTTTCATGAAACGAATTT
CCCAATAATTTTTTTCAAATATGAACATTTTTTAAACAGTGATTTTTTTAAATGCGAACA
TATTTGGAAGCACAATTTTCTAAAAAAATTATTAAAAAAAGTAAATTATAAATATATAGT
TTTAAAATTCTGAACATTGTTTGAAAAACTGAAACATTTTCTCAAAAACCAAAATCATTT
TTCGAATTTGAAGAATATTTTATGAAAACCCAGAACATTTTTTGAAAAAGAAAATGAAAA
GTAAAAAAAGGAACATTTTATAAAATTTAGGAACATTTTTTAAAATTACGCAACATTTTT
ACAAATTCTGGAAAAAAAGTAAACATACGGGACATTTTTTCTAATTCTGGAACTTTTCTT
TAAAATTCCGAAATGTTTTTTCTAATTCCGAAATATTTTTCAAATTCTGGAACATTTTTC
AAATTCCAGAACATTTTTTAAAATTCCAGAATATTTTTCAAATTCTGAAACATTTTTAAA
ATTCTGGAACATTTTTTCAAATTCCAGATCATTTCCTCAAATTCGGAACATTATTCCAAA
TTCTGAAACAATTTTTAAAAATCCAGAACATTTTTAAAACAAAAACAAAACAAAGAAAAG
AAAATTGATTCAGGGAATCTTCTAGAAAGTTCCTAAAACCGGGATATGTGAAAGTGTTAC
CGGGCCAGCCCAAACCCCATCGCTCGCTCGCACCTCGTGTGCGAAACGGCGACTACTTGC
CGCAACGAGCAGCGTATAGGAAATTCCGATCGGCTGATCGACGTGATGGTTTTTCGCTTC
ATTTATCGTCCATCTAATCTACGCCCGTCGCCTAGCAGACACACACACTGCGAGCTTCCG
GGTTCTGGTGTGTTACAAATGAACAAACAATTGCACGTAACGCGAGCAAGAAGGTTGTCA
ATCCTCTTGTCTTGTTATTTACAAGCAAGTGAGGAGTGTAGATAATTGTAGATAGCAAGA
TAAAAAAAAGTAAATGGCAACAAGATATTAAAGGTTTTATCAATATGTTGTGAGTAGACC
TGGGGCCATAGCTTTCCCTAATGACATATCTCCTTAAAAATAGCATATAGTCGGTAAACA
AATTATTGTTGGGCAATTGACACAAAAGCGAATGGTTATTTGATATTCATTGTTATGATC
ATGTGTATATAGGCATCACGTCCATAAAAAATAGGCCGACTTCCGTTTGCACCTATTACT
ATTACTCCACTTATCGACCGCTATCCAACATACATCTAGAGTATTAAGTAAAATAAAGTA
ATGCATGGGGAATAATGACATGATGTAGACAAAGTNNACTCAAGCAATATGAATAAATCC
CATTGTTTTATCCTTACTAAAAGAAACACAAAGACGCATCTTGTGCCCTTCTATCACTCG
GATATAGAAATTCGCGAGGTTGAACCTACTACAATGCANNNNNNNNNCCGAAGAAATATC
AATCTAGTTGGCAGAACTATTTCAATAGAACGGAGAGAATTACGCAGCTATCATAACCAT
GCACAGAAGAATCATATAAGTATTCAGAGGAGACTCAAGAATTGATCATGAATAATCTGA
ACATAANNNNNNNNNNCATCGGATCCCAACAAACGCATCGCATAAAAGGAATTACATCAT
ATGGACCAAAGCAAAGACGCGATAATCATTGTATTCAAGCTCAAAGAGAGAGATTTCCAT
CTAGGTATTGACCATGGACTCGTACATCTGTGGTGAACTACTCACACATCATCGTGAGGG
CAGCAAGGTTGATTAAGAGGCCCTCGGTGATCGACCCCCCTCCAGCAGGGTGCCGAAACG
GAGCTTCAGATGGCCTCTCGTC
