morexGenes - Barley RNA-seq Database

Contig contig_366388
Source Contig contig_366388
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_366388 (10351 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_366388

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_50785	3	3776 bp	AK371800	Available	Available	None
MLOC_50786	4	2824 bp	MLOC_50786.3	Available	Available	LOC_Os07g49270.2, FRAME:-3, EVALUE:0.0, 13107.m09967 protein AMP deaminase, putative, expressed
CDS Structure of MLOC_50785

CDS Structure of MLOC_50786

Contig Sequence (10351 bp)

>contig_366388 10351 assembly3_WGSMorex_rbca.fasta
GGGCGCTGGCGGGGGGGCGCGGGCGTTCGGGGGGGCGGGGGGGGGGGGGAGGGGGAGGGC
GGCGGCGGCGGCGATGCAGCAGCGCCGGAAGTCGCCGTTCGCGGCGGCGCCGGCGGCCGC
CAAGCAGGGGGAGGGGGAGGAGGCGCCCGCGCGCAGGCCCGGCGCCCCGCTCTCGCTCGC
GGGCCTCCTCGTCTCCATCTTCCTCGTCGCCCTCTTCGTCTACAACGAGGACTCCGCCGT
CGTCAAGGCCCCGCTCGCCGCCCTCGACGCCGGCGCCGGGGACTTCCCGCTCGCCGGCGC
CTCGCGCGCCCGGTCCGCCCCCGACCTCCACCTCCTCCACGAGGTCAACCCCCGCTCCCA
GCAGCAGCAGCAAGGGGGCGAGGGGGACGAGGAGGAGCGTGGCCATGTGGAGCAGGTGGA
GAGCAGGAGGAAAGCGACCGACAGCGACAGGGCGGACGCCGCGCCCGCGAGAGCAGACAA
GCGCGCCGCCCCCGCCACGACGACCACCGCGCCTCCCAGTCCCAGCAGCGGCGGCAACAC
CAGCAGCAGCGGAGCAGCGGTGGTTGCGCAGCCGGAGCCGCCGGCGTGCAACCTGTACCA
GGGGTGGTGGACGTACGACGCCGAGGGGTCCCAGGTGCCGCTGTACCGGGAGCCGGAGTG
CGAGTTCCTGACGGAGCAGGTGACCTGCATGCGCAACGGCCGGCGCGACGACTCGTACCA
GCGGTGGCGCTGGCAGCCCTCCTCCTGCGACCTCCCCAGGTACGTACCCTCTAACAAACA
AACTCCGGCGCCATTGCCGCCGACGACTCGTAGATCTCAGCCGAAAGAACGGAACGGATC
GCAGGTTCGACGCGGGTGCGCTGCTGGAGCGGCTGCGGAACAAGAGGCTGATGTTCGTGG
GGGACTCGCTGAACCGGAACCAGTGGGAGTCGATGGTGTGCCTGGTGTCGTCGGCGATCC
CGTCGCGTGACAAAAAGTCGCTGGCCAAGTTCGTCGGGCCCAACGGGTCGATGAACGTGT
TCAGGGCGGCGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCATTCCTGGTGAGCT
CCAACTCGGACGACCCGCAGGCGCACAGCGTGGCGGACCGGGTGGTGGCCTGGCGCTCCA
TCGCCAAGCACGCCCGCCACTGGCGCGCCGCCCACTTCCTCGTCTTCAACACCTACATCT
GGTGGCTCAACAACTTCCAGATGAAAGTCCTGTGAGCTAGCCCCTCCTCCTCCGCCCCCA
CCTTCCTCCTCCATTGCTGCTTGCTTGCTTGCTTGGTCCTCCATTGCTGCTTCCCTCCAT
CAGATTGCTTGCTGTGATGATTCTTGCTCGGTCCACGTATGAGTGATGAAGATGATGGAT
GGATTTGCAGGAAGAATCCACGGGCGTTGCCGGACAAGTACACGCTGGTGGACAGGCCGG
TGGCGTACAAGGAGGTGCTCAAGACCTGGGCCAAGTGGGTGGACCGGCACGTCGACCCCG
ACCACACCAGGGTCTTCTTCATGGGCATGTCGCCCAACCACGGCGTGTAAGTCAAATCAA
AATCACTCACCAGCTCGCTCTCGACCAGCATTTCTGCTACTTCCAACTTGTTCGTATCGC
GTCCCCCTCATTCCCGTGCGATTTCTCCGGCATGGAGTTGCGCTTCTCGGGCAGTGCTAA
TCCCTTCCTGCCGTAGTAGACTATCGTACTGCCAATTGTTTATCAGTCAGTGAGAGCAAT
TTCGACCGTAGCGTAGCCACGAGCGAGAGTAATTTCGCTTGATCACTGGTGACTGAATGG
GTGACACGTGCTTCACATTAGGTGAGCCGCTCTCTCGCCGGCACCAACCCACAGTGCCAG
AACGAGAAACTTCGCCGGGGGAGGAGAGTCTGAAATCGCAAAAATCCAGCCCGAGGGCAC
ATGGGCATGGGCAAGCAGCAAGCAAGCTTATTGAATTGCGCCTGTCCCCCTCAGCTAGCC
ATTCTGCTGACTAGTACTCCTACTCGCTACTCGGCCTGGCCCCAACCCAACCAAACTGAG
CTCACTTGATGAATTCTTGAGTTGAGAGTTAAGAGTTGAGAGCTGTGACCACACTAGGTA
GGTAGGCAAATGCAAGTATATAGATCCCCTCGATTCTTCTTCCTGCTGGTAGAGCATTCA
GTTGAACCAATGGAGATGAGACGATTCCTCATATCGCCCATGCCTTGGCGCAGCGGTAAA
GCCGTTTGCCTCGTGAGTCGTGACCGAGTCCTGAAAACAGACCCTTGCAGAAATGTATGT
AGGGAAATGTTGCGTACAATAGATTCAAAGTGATCGGACCGTGCGCAGGCCGGAGCTACG
GCTGCCCTTCATATCTCATAGCTATCGGTAGTGAAGAATTGAAGTGAACATGCATAGCAT
AGGCAGCTCCATAATTCAGCGAGTAAGTAGGTGTTCCACAAGTAGCCACGACAAATCCAA
AAGCTAAGGTGAACTGGACTGCTGGAGCCTGGAGCGATGCCATCGGAGTGTACTGTAGCC
CAGCCGTGATGGGCGCGCAGATGGACTGCTTTGTGATCAATACTCTACGTGCGCATACTG
TGAAATTAATGCATGCATACATACATGCATCTCTCCATGACAGTCCCCACTAACCCACTG
CCACTGCCACTGCCAAGAAGAACCTCAGTATTAGTGCCACTAAGAGCAACCGTCCAAGCC
CCTTTAGCAGCCACCCCCTCCTCTGTCCCCATCCCCGTCGATGTGTCCACCCACCACGTT
CCAAACAGCTGTGTTTAATCAATCGATCAACCGATCGCAAAAGAGAATCACATCGTGGTA
CCAAGGCTTTTTTTCATGCAAACAATATGTCCTAGTAGGACCATTTCGTTCGATTTTGGC
TGGCAACTTCCGCTTTAAACAAACCCCGTAATGATTCCACACACACAAATGGTATCGACA
AGCACGTGAGCACATCATTCCACCAAAAGCAAGCAAAGAAACAAACAAACAACACAACAC
AACACAAACATACAGAGGAGGCAAGCATGTGGTTGGCAGCCCGTCACCTGGAGCCAAACC
ATCATGGCGATGGCAGCCTAACCTAACCTGCTAACCTGCATCATGAATATACGCAGACAA
GTGAGTGAACATCTGAATCGATCTGATGATGAATGTAAATGTGTTTGATCGTGCAGGCCG
GAGGCGTGGGGCGGCGGCCCGGGCGCGGTCAAGTGCGCCATGGAGACGCAGCCGATCCTC
AACCACACGGGGCCGCTCTACATCGGCACGGACTGGCGGCTGCACGGGGCGGCGGAGGCG
GTGCTGCGGTCGATGCGCCGGGTGCCCGTCCACCTCGTCGACATCACCGCGCTGTCCGAG
TTCCGCAAGGACGCGCACACCTCCGTGCACACGCTCAGGCAGGGCAAGCTGCTCACCGCC
GAGCAGCAGGCCGACCCGCGCACCTACGCCGACTGCATCCACTGGTGCCTCCCCGGCCTC
CCCGACACATGGAACCACTTCCTCTACGCCCAGATCGCCGCCCCCTCGCCGCCGGCGCAA
GAGGCGTCGTCGTCGTAGCGTAGACTAATTAGTAGCCGTTGTCGTGTGCTCAACTGATCT
TCTTTATTGCCTTCTTTTCCTCTGGGTTTCTCTCTCCTTTTTCTTTGTGTAACCAGTGTG
TCGATCTGTGAGTAATTCTTTTGTAGGAAGCACGCAAGGGTTTCAATTAGACTTTGCAGG
AAAGAATTGTATGTTGGCTTTTGCATGGATGGATGGATGGATTGGCACGATGATGAAAAT
GTGAAACAAGGATACGGACCACTTCCCTGATCAACCAGTAGTTGGGCCATTATTCCTGTG
TTTTTCACCGGGGAGTCCCCATCATGAACATACGCAGCCATCATTTTTTCCAAACCGACG
TCTCATCATTTCCTAACTAGCGTCACGGCTGCGACATCATCGTACTCGTGCTACTACTTC
CATTGAGTTGGTCCTGGGCATGGGCATGGTGCCGGCGGCGACGTGGCCCGTCAACCACAC
ATACAATGAGTAGGGGTGGGGGCACTAGCATTTGTGAGTTCTCGGAATGGGAGCGGCAAG
CTTGCATCAAGATCCTCATCATAATTTGAAGGGACCATTCCAAGTGGGCAGTGGCCGAGT
TGAATCTTCTGCGGCTTTACGCTCGCAGGCACGGCGTGGCCAAACAGTAGCAAGGGCCTA
CACCACATGCACGCTCGGAAGGAAATAACGCTGACCGACACCAGACAGATGCTGTGTTCT
AGTAGGAAAAAAAAATGATGCAGCTACTACGGTGACATGATAATACCGAATATTAGGATA
TAAATGAGTGAGGGAGGCGACGCGAATAAATTACCAGATTTAACATGCTGTAAAATCTAC
GTAGTACTATCTGGGTAATAAAAGCAAAAGATGCAAGGATTTTATTCCAAGGAAGGTCAC
TAACTAATGTACCCAGGGAGCGAGCCTGATGAGTGTGTGCGTGTGTCTCCACTGGAATCC
TAGAGTGTCTTCTCCTTATCCTTCCATGCTGATATATCTGCCTATACAGGTAACACGAGT
AAAAGACTCATCGAAAAGGTACTGGGGCGGGCGCTTTTCTTCTCTTCTACACAGACCAGC
ATAGGTTCGCTTCTCCGAAGGCCAGAAAACGGGATGGACGGAATGCCTGACCATGGGTGC
GCGGGGCTTTGAGAACTGCTGCAACATCTTCACCTGTCGGTTTCTTCCGGTAGGTTAACG
TTTCCGAAATGTATCAGCTCCATCTCCTCTTTCCAAATCTGCGGGTCAAATCAGAAATGC
AATCATCGTTACAGCAAATCAAAATTACAAGCACCTGAAAAAGAAACAGATGCCACAGGC
AGAGAAAGGTGTAGAGCACATACGTTGTGTCGGAATTCGATCCTAATGTGGGGAACATTT
GTCTGGTGGATGTCATTGCCGTCGGGACCTCTTTTGTAGTAGTTTCTACCAATCCAGTGT
GACTAGATGAAAAAAAAAATGAAGGCCAGAGCTTAGGGGGAGTCCATGAATTTGAAATAT
CAACCAGCAAAGGAAATTGGCAAATGAATGTGCACCACATACCTTCAGCCTATGAGAGAA
ACCGGACTGGTACACAGAATTCCTGGCTATCTCACACAAGTCACAAGAGCTAAGCTTCCA
CAGCTGCCACAAGTAACAGTCGACCAAATATTAGGCAGGTCCGATTGGGCATGGAACAGA
GCGCATAGTGGGAGGGGGCAAAGGAAATTACCGAAGCAGCGACACTGTATTCTTCAACCA
AAGGTTCTTTTGTTAGGTGAATTTGCAAAGGGTCGTCGGTTGAGAGAGAAACATTCAGGC
CTCTTAGGAAAAATGTTGGGAAAGGGTTCCGGTGGTAGTCAATAAACAATGAGTTGTTGC
TCAAAGGAGACATTGCAAGACCAATCTGATTGCAGGCAAAGAAATATGATTAGTTTCTTT
TGAAGAATCTCCTGAAGAAAAAGAAAAAAAACATAGAAAATACCACTCCTAACCTGAGCA
AGATAATACAAGTACTGGAGGACAGGGGACTTCTTTAAGTTCACCCCGTGAGCAATATTG
TGAGAAGTGAGAAATGCTGCAGCGAGATGATCAATATCTCCAGCCTGAAGACAATAATCA
TTAAGATAACATGTTCATGTCAAATGTAGCAATGTATATATCATGCAGTATGGGTATACC
TCCCCACAGTGTGGACGAAGTTTGATCGTTGTCATGCCCTTGGAGTCACGAAGCTGCATA
CAAAGTGTTCTCTCAATGCTACTTTTTATTTACTAAAGAAGAAACAAGGAGATCTGGAAA
CAAAATGTTTATTACCTTGTTCAGTGTGTACAGGTTAGCATAACAATAGTATACATAATA
TGCATAGGCTGGATTGAAAACATTAGTCCATTGCTCAGGTGTTGGCATGTGTTTTGTTGG
GCGCCTTTCTGGTTTGCTTTCATCATCCACCAAATCCAAGCCAACAACCTGAAGATAATA
GCATAAGAAAGTAATGATGGTTGGAGAAATACTTAAGAAAAATGCCATGACTAGTCTACA
AGAGAATAATGTAGTCAATGCACTAATTTACTGACGGGGGAAGCCTGGAGGGGCCCTCTT
AGTGGAGGAAATTTGGAAAAATATTCTGCTGACAAATGGTTTTTATACTGCAGGCCAGTA
ACTTTCTCAAGATTGTCCATACTTTTTCTACTAAAGTAGAGAACAAGATTGATCTCTCGA
GCATTGGTCAATAACTTTTTCTTAAAAGACATACTACAAATCAGTTGCTTTTCTATCTCG
TACAATTGCAAGATGACTAGATTAGTACTGAAAGCCACATCAACATAATGCAGACAAGTA
AAAAATATACAAAGTACTTCCACTGACCTGTTCCAAGAAAACGTGCAGCTGAGGATGTGA
AGCAGGATCAACAGTCACTTCAAAAAGTGGAAGAAAAATGTTGTCGAGGAGGTTCTGGAA
TGAATTAATCGTGCCCATCTCCCTGTATACATTGTAAATCCGAGGAATCTGCAGAGTAAA
TTAAACAACGCATCACTGCAACTATTCCAGTAAAAAAAGGTTTTATACAAGTGATTTATG
TTCCAGTTTGGTTTACACAAAATTTATACATTGATTAATAACTATGTTGAGAAAAACATA
GAAACTGCAAAGCCAGAAAACTAAAGAGGACAACAGAGAGCATTACCTGGATTAACCAAA
CAACATTCTCGCTATACAATTCGTTATTCACTATCCAACTTGCCATCTGATCCCACTCGC
TTTTCTTTCTCCCATAAATAGATATTCTATACTCAGCCATCTGATAAAGATAATTAAAGT
ATGATCATTGGCCAGAGCTACATAGGAATAGGAAAAAATAGCTAGATCAATGTGTAAACA
ATGCTTGTACATGACTAGACAATATTTCCCCATTAAAAATCAGAAACGTGAAAAGAACTA
GTAGTGCTAACACTCGATAAAATTAATAAAGAAAGAAGAAAGCACCTGATATTTGCTTGC
TTCAAGGTCAGCAAACACTTCTTTAGTTAATTCAGCGAGGAAGCGACCTAGTAATAAGAC
AGGATAATGGTTTAACAAAATTGTCCATGCAGTGTCTATGTTGGCGGTGATTCTAATGCA
GGATATAAGTTACAGTAGTATAACAGCTGAAATGAAGGAAATGAAAAGAAAGGAAGGAAG
TATATTGATTAATTTAACTCAATCAGGCAACAAGACAAAATGAATGTGCACCTTGAATAA
GGTTGTCCTGCTTAAGGAAGATCTCCCTCAGGCGAGACTGGCCACATGGGTTATATTTCA
GATTGAACTTGTCAAAACGGTGAAATGTACTCTTATCAGCATGCACGTCTAAGAGATCAA
CATTGAGGTCATACCTAGAAGAGAGGTAAACCGGCGGTTACTTAAAAAGGGTTACAAAAG
AAAAGTAACAGCAACAGCAACATCAGATGTAGGATTTCAGTTACCCAGTCAAGTCCAAAC
TCTCAAACACCTCCTTAAGAGTCAAGTAGGTCCCATCTCTAAAAATCACAACCTACACAA
ATGAAATTTTGAAGCATAGGTCAAAGTGCACAACGTATAGGTTTCAGGTTTATTGCTACT
TGAGAAACAGAAGCAGCAATTAAGCCAGAAAGTGGATGTACCTCATCAGGTTCTTTCCTC
AACTTTGACTTAATAAACCTCAAAAGATGCTTCTGGTTCATGCATGCAGAGTGATGAACA
TGAGTATCAACCTTCCTGACATTGTAGAAGTCCCTGTGTGGTGCAGCTTTCTGAGCAAGC
AGCTCTCTATCCGCATTGACCATCAAATGAAGATTAAATTTCTGGGGAAAAAGATCACAA
GAATAAAAACAGAAGTCATTATACAGAATAAAATAGATTGTGCATGCATCATTATCAAGT
TCTCAATGGTATTTATAAATCAAGCTAACAGGTCAGCCTGGAACACATTCAATATATGCA
AGCAACCACAGGGCAAATGATTGAAAGAACAAAGTTAAAAAGATTACCTGCTCTAGAAGA
TTTAAACGGTGATGACACACAGTTCGTATATCCCCAGCAGCCAACACACGAAGGATATAA
TGCATATCAGTGAAAAAAGTGGTCGCATCAGCAACAGGATATAATCTTTCTTTAGCTGCA
ACAACAAGGACAGTGTGATGTCAACATGCTCCAAACTGGGAAATCACGAAATGCAGAAAC
TAGAAGAAATGAAATGGTTTTCCACTCACAATCTTTACTAGGATACAGATGAACAACACC
ATCAACCATTTCGAAATGATGCTGAAAGATAGAAAAACAATGTTTAGGGAAAAGTGAAGC
AGAAATTTATGTTGTCACTCATTATACGCATACCTAGAGAAAAGCACTTACGTCAGTTTT
GATCTGATGTTCATAATTGAACGGGTTTGGGTTAGGTTTGGGGGTACTAGGATCAGTTAT
AATTTCCTTCTCCCATGGAGCAACTTCTTCTCTGAAGATGTACTTCTCTCGTAGCTCAAG
ACATTTCTGAAGAACTTTGTACGCTTCTATTTCATCATGAGAAGGAGTTTCTGAGGTAAA
ATCAAGAATAAGTACAAGAGTAGCAACATGTAAGCAAAGAATACTAGCTACAATAGGTTT
TATTCTAGTGATCTAGATCAACACAATCAAGTTGATGCTAATTATACTTTCAAGTTGATG
CTAATTATACTTTCTAAGTAGGTACGGAAAAAGCAAAGATTACATGGACTGAACAGTGAT
GTTCGAAAACACCCTAGTTTGAAGATTTAATGAAAAAAAATTCAACATTTTCCTAAATTA
TCAAACAGATAGATATAAGGAGAGAAGGCATACCAACAGCTGTAATATTGATCCTACTGA
AAGTTTCATGCTCAGGTTCCTTTCGAAGTATATCAGCTGCAACTGGATTTAGTTGGATCC
CATGCAGGCTGCCAGTTGCACTATGAGATCTAATCATGCTCGTTGATGATATGTCCCCAT
TCTGATCCGCTTTAACAGGAACCGGGTCTGATCCCTGTGAAATTTAAAACAATGTTAGTC
TATAGACATAACTAAGGTATATTTGCAAGTAGAAAGTTGTTTCTGAGCTTGAATTTTGAG
GGAATACAACAAAAAAGTCACAGAGAAACAAATATCTGAATTCTAGAAGGAAAAAAAGAT
TAAAAAATTTAGTGTTTAAGCTATATGCAACTTTTTAACCTAATAATCTTTTCTTGATTA
AATTCATACAACTAACATCAAAGACTATATACAAGGTAAACCTCAGAAAGTTGTCTTGGT
AGAGACATGTTTCCATTCACATATTCACTTAATAACATTGAAATCGGTGAAGATCCTTAA
AGCTAAGCATATTATCATTGAGAAACAAACTATCTACAAAAGTAAGCAGTGGGCACTGGT
TGCCAAAGCATATGCATCTTGCACTTACAATAGCCCCATTTGTGCCGGCGTAAACAGCAT
CATCATTTTTGGAATCCGGCTCGAGGTCAACATCCTCATCTGAATCTTCGATGCTCTCAA
ACGCGCTGACAGCAGGAACAGAGGATTTTGGCGTCGTTGGTCTAACGAGAGACCCAAGTC
TTTTGTTCGAAGCTGGAGATATAGTGGGCTTGCCTGAGTGATGAAACAGGCCAACATTAG
CATAAAACGTCATGGAGAAATGCTTGCAGATTACAGCTGTTACAAAACATGTTTCCTGGT
GCCCAGTGCTCAAAACTGCAAACGAAGCCATGTCACAATACACATTATACACCACTATCT
GTTTCTATTGTTTCATCACTACACGCGGAACCATATTCGGAAACACCGAAAAGAGCTATT
TAAGTTACTAAGCTCATTTAAGAGACATTTCCGAGATGCATGGTTTGGAGCATCTCAAGT
TTCGCCAGAGCTCGAACCCTGCATAAATCTGGAGTGTACGATATGCGAATCGGAACTAGG
TAAGTGGCGAGTACTGAGCCACGATGGGATGGATAAATTAACCCAGCCGACGCTAACACC
GCCCTTGTTAAAAAAAAAAAATCACCACCACTGACGAACTGTATGTATCGTAGTGCAGTG
AACTACTGAACAAATCACAATCAGGCTTCTGAATAGCCGGCGCTTGACACTACCGCGCCG
ATCACGTAGCATAGCGCGGGGGGTGCAGGAATCAGGAGAGCGGGGCGTACCCTCTCGGCC
GGTGTGGAGAGGCGGGAGCCCGGGCGGGATGGGGAGGGTGCGGCGATCGTGGTCCCGGTG
CGGGGGAGGTCCGCCGCCGTCGTCCTCCTCCTCCCCGTCCTCCCGGTCGTAGTCGCTGTC
GTCGCCGCCGTCGGGGAGGAGGCGGGCGCGG