Map Locations of contig_365411 (3551 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_365411

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50730 1 1177 bp MLOC_50730.1 Available Available LOC_Os02g22650.2, FRAME:-1, EVALUE:2e-21, 13102.m02546 protein glycosyltransferase, putative, expressed





CDS Structure of MLOC_50730






Contig Sequence (3551 bp)

>contig_365411 3551 assembly3_WGSMorex_rbca.fasta
GGAGAGCGGCCGGAGGGTCCACTCCTTGACGTGCGACAGCGCGTAGGCGTCCTGCTTCCG
GCAGTACGGCTTCACCTTCCATTCCCGGTCCAGCGGGCGGACCTGGATGGTCTGGCTGCG
GCCCTGCACGCGCACGTCGCCGGCGGCCTCGCACGTGTCCGACCGCCGGCCCGACTCGTA
GCACACCGGCTTGCCCGGGAGGCCCACGGCGGCAACGGGCACGGGCGTGGTGCTTGTGCT
TGTGCTCACGGGCACGGGCACGGGCACGGGCACGGGCACGACACCCCCGGACGAGGTGTC
GGCGGGTTTGGGCCGAACTTCTTCTTCTTCCTCCTCCTCGTCCTCCTCCTCCTTGGCTGC
AAATTGCAAAGTCAGCTCAACGTCAGATCTGGCCCGATCCACACAGACACCAGTCGACAC
CCATGAATTCACTTCCCACACGGGCAGCCACATCAAAATTCCCTCCCGTACCACCCAGTT
CCGAACGGAAATGGAAACCATCCCCAAGAACGAACAAGTTCATCACAGGAAGGAAGCAAC
GTAACATACCAGTTGAATCCGCGGTTGGGAGTACGGCTTCATGGGCGACCTCCATCTTGA
CGCTCACCTTCCTCATCCCCTGCCGCTCCTCTGCTTTGATGGCCTCCCCTGCCTTCTCTG
CAGCACGCACGCACGCAAAGAAAGATTATAAATCCACCCTCGTTCAGACCCAAGAACACA
CAAGAATCAGTCAGCGCGGCAAGCAAGAGGGCGTGTACGTACCCATGGGGGAGATCCTGG
CCCGGATGACGGAGAGCACGACGAGGGACGCGAGCATGAAGGCGATGAGCGAGGCATTCC
CCAGCCGCCGCCCGTCGCCTCTCGCCAGGTTCCTGGTGGACTTCATGGCCTGCCTCTCTC
TCTCTCTCTCTCTCTGGGTGCGGCTACCGGAAATCTTTGTCCGTCTGTGTATCAGGAATG
GTTCTCGAGGGGGGGCGTGGAGTCTTATACCGGCGGGGTGGTGGTGGCGCCTGGCGGCAG
AACTAACTGGTTCTGTCGTTGAACGGGCTTCGTTTCTCACCCTGGTTGAATCGGTAGCGG
TGTTGACCGCGTGGACAGAGACGAGCTAGCGGACACGCGACGCGATGGGTGACGCGAGGC
GGTAGACGTGGAGGCGAGCTACTCTGGCAAGCCAAAGCGAGAGGGCAGGGCAGGGGAGAC
TTGGGAGAAAGTGACTCCAGCAGCAGATCGAGCTCGCAGCTGCCGCCGTCGGTGACCGGC
CCCGGGGCTCCGTCGATCTCCAGGCTCGGTTCCGACAGTAACTGCTGCTCAGCGCCGTCG
CTGTCGTCCGTTGGCTCCGGAGTTTGCTCACTTCGAGGCGGATGGCGCACTGTTAAAAGG
CTGATGGCAGAAATCCAAGCTTGCTGTTAAAAAGTACGGTAGTTTTGGAGTAGACAACCC
CCGAACTCTCCGGAGGCTGAAGCAAGCACTTCTGAAAACGCAGGCGAATCAACAGCATCG
CTGTTATTAACTGTAAAAAACAAGGCAGCTAGATCAACCACGGCGCTACCAAATTGCTCT
GTTTTACTTGTGCATGTTAGTTTTGTCATAAGTCAAACTTTATAAATTCTGGCCAAGCTT
ATAGATAAAAGATAGCGCCATCAAGATATTGGATCCTAACACAAATTCATTCATTAATGT
GATATCATACTCCCCCCGTCCTAATAAAGTATAATCTTTTTGGAAGTCAAACTTTACAGA
CTTTGACTGATAATATAGAAAAAAGAACTCATCAACATCTAAAATAACAAATCAATAGAA
TTAGATCCATCATTAAAGAATTGTAGTTATATGGCATCATAGATGTAAATAAATTTCTAG
ATAAACTTAGTCAAAATTTATGAAGATTGATTTTCATCAAAAAAATGTGCACTGTATCAT
GGGATGGAGGGAGTAGTACTTATAATGCTAATAACAACAATGGATGATGATAGGTGGCAT
ATAGGCCTTATTAGTCAGCTCCAAAAAAAAACAATATAGGCCTTATTAGTGGTAGACATT
AATTCTTCATCATGACATTCCAAAGAAAAGATTAAACAACATTGTATAAGTGGCAGACAT
TAACTGTTCATCATGATATTCTAAAGCATGTATTAGACATCAATGTACAGATTCAATAAT
CATGGTAATTAATACTCCCTCCGTCTGAAAATACTTGTTCCAAAAATGAATATAATGGAT
GTATCTATAACTAAAATAAGTCTAGATACATTCATCTCTAAGACAAGTATTTTCGGACGG
AGGGAGTACTATAACAACATGTGCTACCAAGATGAACAAAGCATGTGACTTGTTGATTCC
CTCGCGATGTATTTTGAATCTTCGCGGAACCATGGTTCAACTTAACCACCGTCATCTATC
TTTTTGTTGAGGAAAAAAAGATAACCATAGCTATATGTTGTTTATTCATATGGGATATGA
GTCGGTTTGTGTGTGCATACAAATCAAAGTCTAGAGGGTATAACATCCAAAATTCTCTTC
CAAAGCATTGGTTCCTATTTGTTCTTTTCTCCCAGAGCACGAAATATGTCATTTCTTGAT
GCAACTTTGCACATGCATAAAAGGCACAAACATTTTGTAATGTAAAATCATATTTTATCT
CATTTTTATTAAGTATTTCTAATGGTTTTCTTGGTGATGACCTTTGTATTAGTCTGTTGT
GAGATTAAAAATACGATAAGCTAAAATAGCCTATAAATCTAAAGGGGTATAATGTAAATC
CTCGGGTCGAGGGACATGGATAACTCGTTCTACAAGTCATCCCTCGTCTTCTTTTCTTCG
TTGATACAATTAGTGTGTACTTGTGTTCAGTTGGAAAACTTAGATCTAATCAAATTGGAA
TTTGGTGGAACAGAACCAAGAAATGGGTTTCTGGTGTCAAACTGATTAGAATAGAATATT
TTGTTTTCGTACAACAACACACTTTGTTTAGAATTTCTCAACATGTTTACTCGTATAAAG
AAAAATCATGCAATAAATGGGACCAATAATGGAGACCATCACTCAAAATTAAAGCATAAC
AAAAAAGATTATGGGATTCTGGGTTCGAACATCTACCTTCATGGAAAAGCATGACCTCGT
GAAAATCATATGCACGAGTCTTGATCTCTCTTATGATACTTATTGGAAATATGCCCTAAA
GGCAATAATAAAGTGGTTATTATCATATTTTCTTGTTCATGATAATCGTTCATTNNNNNN
NNNNNNNNNGTATTGACCGGAAACTTAAATACACGTGTGGATATATAAACAACACCGTTT
CCCTAGTAAGCCTCTACCAGGCTAACTCGTTGATCAAAGATGGTNAAGGTTTCCTAACCA
TAGACATGAGCCGTCATTTTATAACAGCATCACATCATTAGGAGAANNNNNNNNNNNNNA
AGACCCAACCATAAGCATATCATTTGATCGTATCACTTAGTTTATTGCTACTTCTTTCTT
CATGTCAAGAATATGTTCCTAAGACCATGAAATCATGCAACTCCGTGACACCGGAGAAAT
GTCTTGTGTAT