Contig Data
morexGenes
Links



Map Locations of contig_360251 (2758 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_360251

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50457 1 894 bp MLOC_50457.1 Available Available LOC_Os12g12590.1, FRAME:-2, EVALUE:2e-128, 13112.m01330 protein NADP-dependent oxidoreductase, putative, expressed





CDS Structure of MLOC_50457






Contig Sequence (2758 bp)

>contig_360251 2758 assembly3_WGSMorex_rbca.fasta
GGCCAGCGGTGAGGAGGTGAGGCGAGGCGGTCGGCGCGTGTTGGGGCGCCGGTGTGTGCG
AGGCGGGCCTCTCCCTTTTCCCGTGCTAGAGATTGAAGATAGGAGGGATGGGGACGACGG
GATCTGACGGCTCGGGGGCCAAATCTAACGGCTGAAGCTCGATCGGCCCAAAAGTTGGGC
CGGCGCGCCGGCGCAGAGTGCTTTCCATATCAAAAAGTGCGTCCGGAGGTTGGAGTGCAA
CAGTTTCACTTATTATGTAGCATGCAATTCTATGCTTCACCAAAGTAGCACCCTCTCTTT
CTCCAACTTCCACCAAACACTGGCGCAAGGTGTTCTCAAATCCAGCAAACCGAACTACAA
ACCTACCTGAATTCTCATCTTGGAACGTAGATCGGCACGTATTGATGCTTGCTAGGCCTC
TGGCATGTCATGTCAATCCTGTGCAACAGCCACAAGCTGCTTTCCGATGTTATGCCCGTG
GAAGAGCCCGACAAGGGCTGTCGCCACCTTCTCGATCCCCTCGGCGACGTCCTCCACGTA
GGTAATGTTCCCTTCCTTGAGGTGACCCCCCGTCTCCTCTTCGAACTTGCGGTAGGTGCC
GAAGTAGTCCGTCACAAGGAACCCTTCCATGCGTACGCGCTTGGTAACAACACAGGCAAG
GTTGCGAACGCCCTCGGGCTGCTCCAGGTTGTACTGCGAGATCAGCCCGCACATGGCCAC
CCGCCCGTGCAGCCTCATGTTGAGTAGCGCCGCATCCAACATCGCACCACCCACGTTGTC
GAAATATATGTCGATGCCCTCCGGGAAGCACCTGAGAGAGCAAAGCATCATGCATGGCAC
CAACAACTCTTGTTTAATTGGCCCTAATCCTCAAGTTGGAACACAAGAGGGCCGGGCTTG
CAATTAACCTCTTTAGTGTGGCGTTGAGGTCATGCTCCTTCTTGTAGTTGAAGGCATCAT
CGAATCCAAACTTTGTTTTCAGGAGGTTGACCTGAGGAGAAGGCAAATTTATCCCACGAA
AAATGGTGTATTACTGATGTTGTGAAACATTTTGATATTTGGGGATCAATGAAATTGCTA
AAGGCAGTGACCACAAAATCAGTATGAAGAAAACTATCCATCGGGGATGTGCAGAGCCGG
AGGAGAAGAGAAAACAAGCATGTACAAACCTTCTCATCAGAACCGGCACTGCCAACGACA
TAGCAGCCCGTTATCTTGGCAAGCTGCCCCACAAGTTGCCCGACTGCGCCTGATGCTGCC
GAGACAAATACATAGTCGCCTTTATTTGGCTTGGCCACGTCGAAAAATCCAGCATATGCA
GTAAGGCCTGGCATGCCTGAATTATGAAAAATAAAATTACATTATGAATACCTGAACATG
ACATGGTATGCTACACTAGTTTCCTTATTCTATCATGAATGTATGATCAACTAGGTTTCA
GTGCTTATTGAATCAAGGTTGCCTTACTTGGTTGATTATAGCAAAATATGGTCTACCAAG
AAACTTTGTCGGAAAAAATGGACTACCAAGAAACGAACCCATAATATAACTATCCGGTTT
CAGAATAACGAATATATAGATATAACAGTAGTAACAAACAACCCTATTTAGTTTGGGACA
AATAAAAGTGTACTCACCGAGAACACCGGCGTAGTACGATAGCGGTAATTCTGGGTGATT
GATCTTGAAAAGCGACTCCGGATTAGTGATCAAGGTGTACTCTTCACATGCCGTCATTCC
CCACACCATATCACCGGCCTTGTAATCCGGGTGCCCGGATTCTACCACCTTGCACACACC
GAAAGTAGGTATAACCTGGTAGGAGAAGGATTCAAAGGAGGCACGGAAAATGTCAAGGGT
TTCGGTGGGGAAAATTTTCTGAAAAAAAAAGAGATTGATTCCATGTCCATCCATCTGCAG
AACTGCTGATTACAGTAGATTACAGCAAAACATACACGGTACCTACCTCCCCTGGGACGT
AGTCCGGGACGTAGCTGGGCTCCAGGTGCCTGGTCATCCGGCTGCGCATGTAGGGATCGC
AGGAGAGGTAGAGGTTCTTCACCATCACCGCCGCCGACCCGGGCGGAACGGCCACGCGCG
CCGCCGCCGTGACGACCTCCATGTCGTCCTCGGTGGGGAACCCCGTCACGTGCCGCTTCA
GGATGACGCTCCTATTGCTCACCTCCGCTGCCGCCGCCATTGCTTCCTTTCTTTCTCGGA
CTACGCAACGCGCTGATGAACTGGTGGTTTTCAGATATCCAACGCGTTCGGGAGGGTATG
TTTCATGCGTGGCTGATGGAGATCGGGCGGGTGGTGGGAGCAGCCGGCCGGCCCGTGGAC
AGAACTATCGGCAGACCACACACCCCTCGTCCTCTCCGCCGCGGCATCATCATCAACATA
AGAAACACAAGATTCTTGCTCTGTCAGCTTGCGTGAATTAGTTAAAAATAGATACACAAG
ATTCTTGCTCTGTCAACTTGCGTGAATTAACTTTTTTTTAACTCAATTATATAAACTAGA
TACACGACACAAAATGGCTGGCTTATTTCAAACAAGATCTTTGTCTATGAGACGCGGGGC
CACCCTTGCGGTTGTGGACTTGGAGGTGCGTAACGAATACAAAATCCATCCTCCTGCTGC
TATACCAGGGGATAGCTTGAGAAGACAAGATCCTCAGCTTACCAAAAAAACGCTCGCTGT
ATCTTTATCTTTATCTTTACCTACTAATAAAACAAATAGTGTTTCTTCCGTACGTCAT