Contig Data
morexGenes
Links



Map Locations of contig_358872 (3163 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_358872

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50349 6 2477 bp MLOC_50349.6 Available Available LOC_Os06g12100.1, FRAME:+3, EVALUE:3e-69, 13106.m01314 protein mTERF family protein, expressed





CDS Structure of MLOC_50349






Contig Sequence (3163 bp)

>contig_358872 3163 assembly3_WGSMorex_rbca.fasta
TCTTCTCCGGCCGCCTCTCCCGCATCCCCTCTCCACCGCCTCATATCCGCCGCCGCGCCC
GCCATTCCCCCGAACCCTGGCAGCTTCGCCGTGGAGGAGTACCTCGTCTCCACCTGCGGC
CTCACACAAGCGCAGGCCGTCAAGGCCTCCGCGAAGCTGTCCCACCTCAAGTCCCCCGCC
AAGCCCGACGCCGTCCTCGCCTTCCTCGCCGGCCTCGGCCTCTCCGCCGCCGACGTCGCC
ACCCTCGTCGCCAGGGACCCGCGGTTCCTCTGCGCCGGCGTGGAGAGAGTCCTGGCCCCC
AACGTCGCCGCGCTCACCGGCGCCGGGTTATCGCGTTCCGACATCGCGCGCGTCCTCTCG
CTCGGCCGCCCCCAATTCCGTCACAGAGCCATGGCATCCACTCTACACTACTACCTGCAC
CTCTTGGGCTCCCTTGACAACCTCCTCCGTGCGCTCAAGTATGGATCCCTTTTCTCCTCC
GACGTCGAGCGCGTGGTCAAGCCCAATGTCGCCCTCCTGCACGAGTGCGGGCTAGGTGCT
TGTGATATTGCCAAGCTGTGCCTGTCTTCGCGATGGCTGCTCAACACCAACCCGCAACGC
CTCCAGGCGATGGTGGTATGCGCTGAAGGTCTAGGTGTGCCCCGTGGATCTCGTATGTTC
AGACAGGCGTTGCATGCTGTCGCATTCCTCAGCCAGGACAAGATTGCCGCCAAATTGGAG
TTCTTGAAGAACACTTTCAGATGGTCGGATGCTGAGGTGGGCACTGCTGTTTCCAAGGCG
CCGACGGTACTGGAATTGTCTAAGGCTCTGCTGCAGAGGAAGTCAGAGTTCCTCATCTCT
GAGGTGGGATTGGAACCGGCATACTTGGCTCATCGGCCGGTAATTCTTAATTATAGCATG
GATGGCCGGCTAAGGCCCCGGTACTGCGTTGTGAAATTTCTTAAGGAAAATGCATTGCTA
GATCGTGACCGGGACTACTATTCTGCAGTCGTGCTGACCGAAAAGGTATTCATGGAGAAG
TACATATGCCCTCACAAGGTAGCTGCACCACACCTCACTGAAGACTATGCAGCCGCTTGC
AGAGGGGAAGTGCCGACTAGATTTATATTTTCATGAACCAAAAACAGGCCATGAAAGTTT
GTAGCGGTGAATGTCACAATAAAGTTTTCACTCTGAGTCATAAGCTGGTGATTCTTGTTT
TCATATTCTTTGCCTAGCTGGATATTGGTTGTCTGCTATAGTATGTCTTTACATATTGGT
TTGGCCATTGCTAAATGAAAGCTGATATTAGGATTCCGCAGGTGCTGGTATGTTTGTTAC
ATCAATCAGTAGAGAAGAAAGCATGACACAGTACTTGATCATTCTCATATCATATTTACA
TACTTAATGGAACTGAATGAGTGGAGATTTGGCAATTCTGCAAATGCATTGAAGTATCAG
TGAGTAGTACATCTGTAGTCTTGATATCTGTATGGTATGTGATCACCGTAGAGGATGTGG
TTTTGATCTGGTTTGTCTGCTTGCTCTTGTTTTTCTACTCCATTCTTTCTAGGTTAGCTT
CTTTTGGAAGGGATTAACTGAAGGTATTCATGGTTCACTAGCTTGTATCAGTTTTTCCCT
TCATTTTCTCATTTACTACTGAATGGCTACTGGCTGATACCTTCAGTTGAAGTGAGAGCT
GGGGTCTGAAAGCTGAATAATGTAGTAACGTTTCTGTAGACAGCCTAGCCATGCAGGACT
AATCCGAAGGCCCTTAATTATTACTTGAGAGGCAGCATGGTTCCCGCTGTTGTCTGACAT
ACATTTTGCTCGTATGTACGTGGTTGCATCGAATGAATTTTGGAGTACAATTTGCATTTC
GTCTGTGTGTTAGATTTTCTTCCAGTTTGCTTTTTAGTTGACGAGTTTTACCAAAGATAG
ACATGCAACTTTTGAGGATGGCATTGAGGTTGCAGACTACGCCATTTAACATCACTAGTA
ACCTATGAAGTGCACAGTTTAGACTTTCATCTTTTGAATCTGTGAGCAGTTATGTATTAT
GCTGTCCATGCTTTCTGAAGCCCTGTGTTTTCAGAAGTGCAGCTTTACGATGCAAATCAG
CATTGCGGTGCAGCAGCAGGCTTCCTCTCTCAGCCAACATTCCATGGGGAATACGAGTGT
TGGTATGTCCTGTGCATTGGTGCATCGTAGTGGCTCAGTTTGTAGTATGGTTATTATCAG
TGTCTCCTACCAATTGATCTGAGCAATTAAATCTGAAGTAACGGGCATCAGTATCTATGA
TATGTTCTTGGCCTGGCTCCAGTTTTATGGCGTATTTGATATTTTGTTCTTCAAAATGTT
GTTGTTCTAATTAGAGCATCAGTAACCAAGCTTAATGGTTTCGATGCTCTTGTATATGTT
TCATTGCAACCTTGCAGAAAACAGACATGGTGAGGATGTGTTGAAACTGGATGTAGATTC
ATGGTGCTTTTAGATGATGGGCGAAGCATGGCGGCTTGGGCTTTGTTTGCTATATACGCT
AGGCAGGATTCTGATTTCTGATGCCTCGAAGCAGCTTCGACGACAAGTATGTACACTAGG
CATGACTGAGCGGGAGTTTTGTTCAGAGGAGAAGAAGCTCCTTCTTGTATTTATTGTGCT
CAAGGATTGTATATAATATATGCAAGGATGCACACACACATTTCTGTCGCCCGCAGGATT
CTTTTTGTCCGCTGCCGCTGAATCGAGTGAGGCAACCTTACTGGATAACAAGTTGAATAA
ACTAGGCGCTTTGGCTAATTTGCACGTTAAGCTCCGTGTTTCCTCTGGCTGAGGACACCT
AGGTTTAAGCAATTGATTGGTCTGTCTCGGTAAGTTCTGTACTCCCAACTTCGAAGTTAG
AGCTGAAAGTTTTGTACTATGAAATTCTGAATCTTTCTGACTTGCACGGTTGCATCCAAC
TGACCCAAGTGAACAAGCTATCTATAGCAATCGAAGTTTTTTTTTTCTGAATCTTTCTGA
CCTGATTTTTTTCCTTACTTCCAGCCATATTAACTCGAATGGCAGTAGACTGAAATGCAG
GTGAGGTGAATGGATCGATTGGTGAAGTTGTTAGGTTGATCTCTCGTTCAATGGGCCCAA
CGGTCCATTGGAACCTTGACCCACGCCCTGATCGGGGGCGTCC