Contig Data
morexGenes
Links



Map Locations of contig_358617 (5888 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_358617

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50337 2 235 bp MLOC_50337.1 Available Available None





CDS Structure of MLOC_50337






Contig Sequence (5888 bp)

>contig_358617 5888 assembly3_WGSMorex_rbca.fasta
TGACAAGTTAATAGCATGGAACCATAAANNNNNNNAGATATGTTGGAGACGTATCAGATG
TGCAGACGGCAAAGCATATGTACATACTTTTTTTTTGCATTACTTTATTTCTGTACTTCA
ATAGACAATACATATTTTTATAAACACCAATGATCCGTATAGAAAGAAATGATTACACAA
ATGCAACTGACACAATAGTACAAATGATCCGTATCATATATATGAACAGAACATGTTCAT
GCATGATCCATCTTACACCATATATATCACATATGTCATGGTGATTCCTATCACACATAG
ATTGATATCACTATCAGATATTTTGGCACTACCAGATTTTTCACCTAAGACACAAGCTAC
AGGTCAGACCCACTGCAGGAAGCGACATACATATCTTGAGCACGATGGCAACCTGCTGCT
CCTTTTACTCCTCCATCGTCGCTGGGCCAACTACTGCTGGTCGAAGAAGCCCGACTGGTT
CATCCAGCACCTGCACCACAACAGACCAGGAAAGGTTCACATCCACGTACAACGGGCACA
AGAAACAGTTATTTGGGGCACACAAATAATTTCACTAGGCACCAACATGGGCACAAAAGA
TTAAAGCTAGAATACTAGATGGTTATATGTGTAATAATGCCCACCCACAGGTGTCTAAAA
TTGATGTAATGCATTTCCAATATTTGTCGAGTAAATGCAGGAACAATCTATTTATGGAAA
TCATGGTGAGTGGGGTGGTGATGTACAAGATACGTACCTGATGTTGTGAATCTTGTTTAG
ATGACTACTGGAAGTTTGAAGCTCCCTTGTGGCTTTATCCTTGCCCTTAGAAAGCTCAGA
TCAGATGAGCATCACCAATATATAAGTACAACACACTATTTGCGTTCCTTGACATACACT
AGATAGCACACTGAATAAATAACAGTGATCAAATTAAATTGTACTGCATCAAGCATTACT
ACAGATTAGATTTACTACTCCCTGCTCCTTTGCACCCTTGGCATTGTCCCTCAATAATCT
TCTCAATAATTCTGTACAAATGGAAGTAGAATTGAACAAGATAAATTGGGGTGCTCAACC
ATTCCATTAGGATAAACATACTCGGGCATCCCATAATAAGCCATATTTTACGGAAGTACT
CGCAATAGTATACAACTGCGGAGGCCGCTAGCAGAATATGTAGAGTAAGTTGACAAACCT
AAATAAAGCATCATAAATTTCAATGTGCTTGAAAGGATTTATCTGCACAAGACGTTCCAA
TAGTAGCTGCGCATGGTCCCTGGCAATTAACAAAAGAAGTCAATCAGTGACATATAATAG
CATATCAAAAAGACAGATGTGTTTTACTACAGATTCGAAATATACTAAGCGTAACAACAC
AATGTTATTGGCAGAAAATTTGCAATATTATAATATATCTCAAATCAATGGCACTCGAGA
TAATACCAATCATGGACTGAGAGGAAACCAAGAAGAACTCCAAGCTTCTGGTTCTTTTCT
AACTCAGGGGCTCGCTCATCAATTATATCATTCTCCATCTCTAATGATGTGTATAAAACG
ATCGCTATTTCTTGCTTCTCGTCGTCCATAAGGTCCTTTCCAGTAGCAGCAAGATTTATT
TTGCCTATTTTAGTAGCCTGGCATCAAGAAAGAGATGAGTAAACTCCATATGTTGAATCT
CTAATGTGTCCATAATAATTATTCAAGTGTATTGAAGATCAATGCATGCATTTCATAAAG
TAAGACCAAATCTGCATGCACAGCTTGAAATATGTCGAGTAACAGAAAACATGGTTGCTT
CAACCAGTGGAAGAGTTCCAATCAGTGTATCTCTACTCGCGATAGAGATGTTCTTATACA
TAGAGGTACTGGAAATAGGACACCTCTTCAAAGCCTAAAACTACAAGATGACAATCAAAA
GTACAACTCTTATATGTTTGCCAGTCGAGTTACAGTTTTGATGTGGCAACTTGTTATTAG
TCCACTTTTCATGTAGTGGTTCCAACAAAAACTATCACGGTATTTGCATAAACCACTTTA
CACGATACTGTTTTCAAACTATCATGGTATTTGTATAAGGAGACTTTACACGGTACTGTT
TTCCTTTTTCAAATGGAAGTCGTTTGCTAAATCTAAAAGTTGGAAGCATAAAAATCATCT
GGAATGCATTGCAATGACATGCATATAGTTCTCATTTATAACCCTGTGAAAAAAGCAGGT
CCTTCTTAGAACAGAATGAATTCAACAAGAAAAATATCCTAACCTCATCAATTTTCCTTG
AAACAAAGNNGCCAAAATGCTCAAACGCCTCATTGTCATTTGGAAGTAAATGAGCATAGC
TGAAACAGAAGAGATAAACGTGTCATGATGTATGACGTATCTGAGGTGCAATTGAAAAGG
ATATAGCAACACAAATAGATCCGGCAGCAACGCTAACTCATATTGATACAACATAAATGA
CTATGAAAATAAAAGATAACAAGAACTTGAGACTACGGTTATGGTCAGTTTGTTACTAAA
ATAACTAATGCTATTGATCCTACATATGATTTACTTTTTCTCGGCATTGCAGTACTAACT
ATCTGAGGAAAATTCCCTAAAAGAAGTATAGTACTGCTCATACAAGTTATCATACAGTTA
TAAGAAATGGCCATCAGAATAAGAGCAGAAGTTGAAGATGGAACCACCAAAGGAATGTAA
TGTCAAAAAATATCAAATATACATGTATATATAAGCGCAGGTCTTAAACATAGTTAACTT
TATTTAGTAAATCTCTCTCAAACAAAAAACTTTATTTACTAAAATACAGAATAAAGCAGA
GCAACCATGTATCATCAATTCATCACCTTAACCTCGTGTTAAAGCCTACTGGGGGCGACT
GGCGAGGAAGCCGGCGATGCTGGGGGTGACGGGCGAGGAGGGTCGAGGTGCCGAGGGCGA
CACGCGAGGAGGCCGATGGTGCCGGGCCGACGAGGCCTGCGGGTCGTGGGGGTTGTGCCG
GGGTCTCCGGGGGTGTGGCGGTGAGGCCGGGGTCGCTGGGGCGTGGGGTATCGGGGGCCA
GGCCAGTGCATGGGGGCGCGGAGCCGGGGTCGCCGGGGCGTGGGGCCGGGGGCGACGGCG
CCGGGGATGAAGCGGGAAGAGGGAGGGGCCAGGTTGCTCTGGATCTTTTTTGAACGGGGA
AGGGCCGACTTGGCCCTTATATTTCATGTGAAATGAGAGTTACATCATTAGCTAGTACAT
TGATGTGGAAAGCAGGAGGTTCCTCTAGCCACTATATAGTTATAGTGGTCTCAGCATACC
TAGCTAGAGTATCCGCTACCATATTGGCCTCTCTAGGGCAGAACTGAAATTGAATAAAGC
TAAAGTTATTAGCAAGGAAAAAATTCTTCGTAGATTGCAGCGGCCGGTCCAAGCGAGTTG
CCACTATTGAGCATGATTTCCACTACATCCATGCAATCAGATTCGACAACAATCTTCCCT
AGCCCCAGCTCATTTGCCAAGATGAGGCCATCTCTTAGCCCTTTGGCTTCCGCCGAGCCT
GCATCTTCAACGAAGGGGATGTCACTGCTTGAGGCAGCCAGGAGGGTGCCTTTATCATCG
CGAAGCACAGCTCATGTACTTCCTGCTCCGGAATCGCTATTGAAGCTTGCATCCACATTG
AGCTTGTAAAGTCCCTCGGCTGGTGGCTTCCAACCGTGTCGGATAATGCCCTCCTTCTTG
CCCCTAGGTCTAAAAAAGTTCTTGGCCAGAGAAGATATCGCATGTGCAGACCTTCGCAGT
TTAAAGATTTTCTCGCCATTGGTGAACTGTCGTCTCTCCCACCAGACATACCATACAGTA
GTTGCTATGAGTTCACCCTGTCCGACATCAACAATGTGCGACTGGAAGCTGCTTTTGGAT
AGCAGGAGTTCCTGAAGAACCACGCTCCCATCACGTTCGATCGTGCAGACTTCTTGGACA
AGGCCTGACAGCCCCAAGATTCTCCATATTTCATGTACGTGCGGGCACTGGAACATGACA
TGTTTGATGCTTTCACAATCTGATGTAGAAAGAGGGCATTGCGAACTGGACGTGATGTGT
CGATTCGCCAAAATGTCGTAGCAAGGGATTGCTTCGAGCAGGGACTTCCAGATATGTATT
TTTACCTTAGCTGGGATCCGCATCTTCCATAAGGTTTTCCAAATTGGGTTAGTACCTGAG
GTTTGATGGGTGTTCGTCCTCCTCAACTTTCACCCATGTTGAAATTCCCATTCTTCGTGG
TAAGCAGATCGCACTGAAAAGATGCCGTGTTTGTCACGGTGCCATGAAACAAAGTCTGTC
ATCATCCCGAGCGCCAATGGGATGTTCATATGCGTTCTGCATCAACCGACCAAAACAAGT
GTCGAATCAGGTCCTCATCCCAAGATCTATTCTCCTCATCAGTAAGTTCAGATGACAATA
TTATTCCTCGGTGTTAATAGTCGATTATTCGGACTGCTAGGGATCCAAGGGTCTTCCCAA
ATATTTATCGATGCTCCATCACCTACTCTCCAAATAATATATTTTTGAAGGTTTGAAGTC
CACTCCATACACTTCTCCATGTTTATGAACTCCCCTTCTTTAACAAGCAGTTCAAGAGAT
CACTATCAAGGAAGTACTTTGCCCTAAGCACTCGAGCACATAGAGATTCATGCTCACTCA
GGAGTCTCCAAGATTGTTTTGCAAGAAGAGCAAGATTAAAGCAGTGTATATCTCAAAAGC
CCATACCTCCCTTCTCCTTAGGCACACACATCTTCCACCAGGCAAACCAATGCATGTGTT
TCTTGTGGTCATCATCACCCCACCAGTACTTAGACATTGCTAAGGTTATATCCTTGCATA
TCTCCTTTGGTAACTTGAAGACGGACATTGCATAAGAGGGAATGGCTTGGATCACAGCTT
TGAGGAGAATCTCCCTTCCCCCCACGGACAAGAGCTTCTCTTTCCATCCTCTGATTCTAC
TTAGGACCCTCTCCACCAGGTGTTGAAAGCAATTGGATCTATCCACACCTACAATTGGTG
GGAGGCCAAGATACTTTTCCGAAACAGCCTCGGCCATGATGTTCAAAGTAGTACATACCT
CTGCTCACACCTGAACTGGAGTACAAGGGCTGAAGAATATAGCCGACTTGGCCTCGCTTA
CCGGCTGGCCTGAAGCCGTGCAGTAATCGTGAAGAGCTCTGCGGAGGCTCACCGCGTTCG
CCTGGTCCGCTCTCATCAAGATGAGAGAGTCATCCGGGGTGCTCTGGGTCTGGTGCGTGA
GAGAGAAAGATGTACGAGGGAGAGAGACGTGATTTACATCTCGATCTGGATAAAGAGATA
ACATGTGAGAGAACAAGGTGGGGTAGGCATGGGACACAGAGATCATAGATAGGCATCATG
CGGTGCCGATCATGCCACCTCATTGATCCAGGAGATTGACCTATGAGATGTCTTTCTTCT
TTTACGCCTTTTTTTATTAGAGACGACAAAAATTCTTTGTCGTCATCAATTTTTTACAGA
CGACAAAATTTATATTTGCCGTCTTTTATTTTTTACAGACGGCAAAAAGGTCTTTGCCGT
CATTAGTTTTTTTAACAAACGGAAAAATATTTTTGCCGTCGGCAGTTTTTATTAACGACC
GCAAAATGTGTCTACACTGTCAATCATTCTTTGCCGTCAGCAGATGACGGCAAAAATGGT
CTTTGCCGTCATCCACGATGAGAAGCTGACGACAAAGATCTTCACAAATGATAAATTATT
TGATTCCTGTAGTGTTAGTTATAAGTAATAGAAGTGTGATTATCATCATTATTAGAGCAT
TGTCCCAGTCAGGAAATGAATATGGTTGGGGGGGGGGGCAATTGAGCCCACCATATATAA
AAAAATGA