Contig Data
morexGenes
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Map Locations of contig_358481 (3683 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_358481

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50328 1 179 bp MLOC_50328.1 Available Available None
MLOC_50329 1 721 bp MLOC_50329.1 Available Available LOC_Os01g36640.1, FRAME:-3, EVALUE:9e-39, 13101.m03710 protein disease resistance protein RPM1, putative, expressed





CDS Structure of MLOC_50328






CDS Structure of MLOC_50329






Contig Sequence (3683 bp)

>contig_358481 3683 assembly3_WGSMorex_rbca.fasta
ATATGCTTGAGCCTCTTCTTCATCTTGCCGGCGAAGCCTCCGTGCTTGCAGTCCTCCAGC
TTGTAGGTGAACTCGTCGATGACGTCCTCGATCTGGAAGGCGAGGCCCCTGATCTCGCCG
ACGAAGATGGCGGTGGTCTTGTCAGTGTCCTTGAACCGCTCCGCCTCCTGCAGGTAGGCC
TGCATGCTCTCCAACTCCGCCTTGGACCGGCGGATCTTGCCAAAGAGGCCCCTAAGGGCG
GCGGCTTCCTTGCCAAGCAGCGACCCGCCAAAGATGGCCGTCTCTTTGGCCAGCGCGGCC
CCGAGCGTGACCACCAGCTGCCCGACAACAGCCTCCGCCATGGTTCTTGAGGTTTTCTTT
CTTCTCTGCCAGACGATGGTTTGTTGGTTAGCAACTCAAACCAAGTGGCCAAGTCTCGTT
TGAGTAACAACATGAAAAGATCCTTCCCCTTATCTGTGCAATCCCAATCATCTACGCAGT
ATATTAATTGTATGGAACTTGATATAACTAGCAAGCATTCTCCTCTCCGAACAGAATAGT
TTCACAACTTTGTCGTGATCAGATGGAAATCCACACCCGCACAGGTCGACGGCTCATTTG
GCTGTGATGAAAGAAAATGCCCTGCAAAAATCAGTAGAAACAAGTGGAGCATCAGGGACA
ATGCTAGCATGAGCGTCGAAACAAGTGGAGCAGCAGCATGAATTTCTCCTCATTATCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTTCTTATCCTGTCTGGCGGCGGCATCAATCAGCAG
CAGCGGACAAAGCTCAGATCTTTCGTCACACCTCACACAAGACAAGACAAGCGCAGCCAG
CACCGGCCGCTCAGCAGCTAAGGCTTGTGTTTGAAATCAAGCAGCAGAACCATCGGCAGC
GGCAGCGGACAAAGCTCAGATCTTTCCTCACACCTCACACAAGACAAGGCAAGACAAGCG
CAGCCAGCACCGGCCGCTCAGCAGCTAAGGCCTGCATCCTCCTCCTCCTCTTCCAGATCG
GGGTAGGCAGAGCAAGGCGGCGGCGGCTGGCGCTGCTGTAGGCTGCGCTGCTACTGGCTC
TCCTATCTCACTCTCGCTCTCCGTCCGCATCGACGGCAGGGTGGGTGGGTGGTGGCGCAG
ATCCGGGACCTCGACGTCGACGCAGAGCAGGACGACGCGGCGGCGGGAGCGAGCGAGCGA
GGAAGAAGGGGAGAAGGGAACCAACCTGTAGAGTAGAGCAGAGCCTTCTTCCCTTCCCGG
GCGCAGATCCGATTCGCCTGCTGCTCTGCTCTCCTCACATTCCGCAGATTTTTTACAGAG
TTGTTACAGAGCGTGGCAGTAGCAAGTTGTTACGTACTACTCCCTCCGTCCTAAAAATAA
CTGTCTCAACTTTGTACCAGCCTTAGTATAAAATTATATTAAACTTAAGACATTTATTTT
GGAACAGAGGGAGTACTCTACTACTCTACAGGTTTTTTTGATAGATTTTTTAAAACACTG
TTTGTAGAGGGCTTTTTTTTCTTCCTAGAACAGTGTTTTTTTAGCCACACCATACGAACA
AAGTCCTTTCTAATCAGGGGCTGACACACGTACATACAGGGCTTTTTTTTTTGGCTTCCC
GGGTTTGTACTGGGCTTGTAGTACAGAGCTTTGGCCCCACTCGTCATGTTTACCCTCTCT
TAATTCTCTTACTCTACTAATTATCTTTGAAAGCCCATACGTAAGTGCGAAAACCAAACC
AAACGCCCATCTTCTCACCGATCCAGCAGCCCCCTCGCCGCGTCGGTCGTGCCCAGCCCC
GTCGGCTGCGCCCTGTTTCGTTGGCGGCCTAGCCGGTCACGAGAGGCCACATAAAGGTCG
AGCTTGTTCAATTCGAACCGACGATGATCAATTCCAACGTCCAGCAACCTTTTTCAGTGT
GCTATGACGAATTCTGACGATTTAGACGAATTCCGGTATACTAAGGATAGGATCAATTCT
GGATTCCCTCAACAAAACAAGCAACCTTTGCTCAAGAAGACATTGGTCATTGTTGAGAGA
ATATAATAGAACATCCATTGTATGGAGTTGCTCTATTTTTTAACCCAGGAAAGTTCTTTG
CTATTGTAAGCAGAAATGATGATGCCTTAGTTGGGGAGCTAAGTAGTTTCTTTAATGATG
TGCTTACAAAAATGATGTCGGATATCAATGTTCGAAACAAGATTGATCAACAAGTTGTGC
TCTATGAGGGCCAGCGAGAAGGCTTTTCTAATTCATTGGCACTCGAAAACATGAACACAA
GAAAACCTCGTCAGTCATGCTAAATGCATCATGTCAATTCCAGCACGTTAATTCCAGTTC
CAGCAATGTAATTGTTGTACAAACTATTAATATGTGTCAGTTTTTATCATTTTGGTTGAT
TGGTGGAGTTAATATCGTGGCCGGCCATTGACCTACAAAGGATTGCAAAGCGCACTGTTA
GTCTTTGTGCTTCATCATCTGCTTGTGAGAGGAATCGGAGCACGTTTGAATTTGTAAGTC
AACTAGTAAAGCAATATTTATGTTTGTTCAATGATGGTTTCAACAACTTATTTACTTATT
CCATTTTTGGTTGTACTTTGTAGATCCATACAAAGAAAAGGAACATGTTACAGTAAAAAA
AGGTTGAATGATCTTATCTTTGTTTCATACAACCGGAAGAATATGCATCGGTTTCAAAAG
AGACGTGAGAAAGTGGGAGACAATAGCTCTGACCCTTTGGTCATTGAGGATTTTGATTGA
GTCAATGAGTGGGTTGACCCATCACTATCACAACCTAAAGGTGCTCTAGGTTGTCCTGAA
GACATTACATCGGAGGATGTTGATGTTGCTATTGGTGCATCTTCTAACCTTCGAGGCCAC
AACCTGCCTTGGACAACAACTACACTTCATAGGGGGAAGTCAAATGTCTGTGTCTAACAC
TACACATGCAAGAGACCTACTACAACACGGCCTACAATTTCTGAAGAAGAGGAGGAAGAG
GAGAACTTGGAGCAACACTCAAGTATGCCCATTGCCGAGGAGGAGGATTCATACTACGTT
GAGTATGATGATTATGTGAGCAATGATGATCAAGATCCAACAAATATTGACCAAGATGGT
GAAGATAACACCAATGCCAACCTGGATGAGTTTGATGATGATTGCTATTGAGTGAGAGTT
GAGAAACATGAGAGAGTTGAACAACCTTATGCCTTTTGCTATGTTGGCGTTATTTGTTAT
GTGGAATTGTGGACCTTTGTTATGTCATTTTATATTTGAACTGCTCATGTAATATGTCAT
TATGTCATGCCCTGCAGTGTAGATTGTACTCATGCAGTCATGCTTGTTGTCTTGTTTTCT
CTTTTTCTCGCCGCCTCGCTTTAGTTCTCAGTTTTCTTCATTATTTATGTGTTGATTGAT
AGTGTGATGCGTTATTTAGTTTTAACATATTTGTTCATGACTTCATGTTGATGGATGATG
GGTTGATGCAGATTACTGTTGGGGAGAAGATAAAGTGCAAAAAGCATGGATGCTATATGG
GCTCTACAAAGAACATCAATTGCAAGGTATGTATGCCTAGTTGCCTACCAAATCCTGCTA
TATGCTACTTCTTAACACTCTCTAAGGTGTCGCCTTGCCTTATGACTTAGCGCTTAGGCA
GTGAGCCCCCCCCCCCCCCCCCC