morexGenes - Barley RNA-seq Database

Contig contig_355276
Source Contig contig_355276
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_355276 (9011 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_355276

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_50140	3	8124 bp	MLOC_50140.1	Available	Available	LOC_Os06g49390.1, FRAME:+3, EVALUE:0.0, 13106.m05282 protein NBS-LRR disease resistance protein, putative, expressed
CDS Structure of MLOC_50140

Contig Sequence (9011 bp)

>contig_355276 9011 assembly3_WGSMorex_rbca.fasta
GCAAGGATGATACAAATCTCTCTCCTAAAGATGGGTCAGCGGCCTGATGATGATGGCGGC
GTCTAAAACATGTGCATGTGGTNNNNNNNNNNNNTCTGCTGCACCGGTTGTGGGTTCCGA
TACGTTATGTGGGTGGATCAATGACGACACCGGTTTTAGATATGGGGAGTGAGATCACTC
CACATTATCGAGTTTCGTAGGTGTGAGTGATGGCTTCAGAGGGTTTGATGTATGTTCTGT
TAGACCTATGTTGAATAATTAATAAAGATGACCGTATGCATCGATTGATGCAGAGGCCGA
AGGTTTGAACCTCCTTTTTCAAAATAAAAAGTAAACATGAAGGAGGCTGCTAGGCGTCGG
TCAACCGGCCCAAATTTCGTCCGGTCGTCACTCGGCCGTCCGATTCAGCCCGTAGCAACC
GTTGGTTAGTCGTTGTGTCTTCGTCTTCCTCCTCTCACACATCTCGTTAGGGAAAAGAAA
ATCTCCAACACACGTCGCTCACGCAGCACGCCGTCCCTGCGTCTCGTCGTGATTCCTTCC
CAAGGCTCCGTAGTAGCATCACTTGTCGTTGTGGCCATAAGGCATCGAGCTCCGTGCAAG
GGGTGCCGCCATGGCTGCCAGGTCACCGCCTTGGCCATGGTCGTCGAGCTCCGCGCGAGG
GGTGCCGCCATGGCCATGGTCGCCGAGCTTCACTACTGGGGCATTGCCATGCCGGTCGCC
GCTCCCGCCGACCGCGATCGTAGCACCGTCGTAGTCGGCCACTGAACCGCAGACCTAGGG
CGTGGAAGCACAGTGTCTGGTTGCAGCATTTGTCGACATCGGTCTTAGCAAACGCCATTG
CCGGTTGTAGCACCGGGCTCGGCCCTGGTCGCCGCTGTCACAGCTTTTGTCGATGCTGGT
TGAAGTTGTGCCGTAGCCAGTCCCAGTTTTTTCCGATGCCGGTTGCAGGTTTGTCTCATC
ATCAGTCATAGCAACCGCCATTGTCCGTTGTAGCATTCCGTGGTCACAGTTCGAGCTCTG
CCACCGGCCTGTTCCAGCAATTATGCACCACTGTTGCAACAACGACATAGCCGGTTCCAG
CATCTTGCATTCGCCGGTTGTAGCAGGATTGTCTGCTTATTGCAGCTTTTCCATCACATG
TTGCTTCCCATCAAATACCAAATGCAGCACGGCAGGGTGCAGTGCCAACATCCCAATCTA
CCAGTTCCAGCCTCTCGCGACGCTGGTCATAGCATCTGCAGCGGTGTCTTGCAGTGCCGG
TTGGTGGTGGTTGTCCTGCTCGTGGCATGGTGTTGCTGTCCCTCTCCCCCGTAGCAACCA
TTCTCCACCTCCCCTCCCTTCCGTCCTTTCAATTTGCACCACGAAATTGATTGGTAGCAG
GCTGGCAGCGGGGGATCCCTTCGTACCAGCAAGGGGACAGTAGGAGTTGCCATGGATGTG
TGGTGGGGTGTGAGAAGGAGAAGCAAAAAGGGAAGAGGGCGTCTGCATGAGGAGGAAACA
AGTGGAGGAGGAGAGGGTCCCGCGTGAAGAGATAAGGTAGAGTGTGTGAGCTAGCCGCGA
CCCGCACGATGTCGAAAGATCAAATGGCGCGCGCATCCGGCTCAACGCGAGATCTGTCTG
ACGGATTCCAATAACTGAAGGTAGGCACCATTATGTCTGTTCAATTAGTAAACATGACTA
ATTCTTCAATTAGTAAACACCTACACCCTATGTTTCTAAATATAAGATGTTTTGGCATTT
CAAGAGGTGGTAGAATTTATGTTGGGTAGGCGCCATGGGATGTAGAGGCGCAACAGAGAT
AGAAGACACCATCTTTCCCATTGATCGTAGACCCGCATGAGTAATGGATACCCACTAGCA
ATATGACATGTCCACATGGAAACCTTAAATTACCATCTCCTTCGTCGCCTCCGGAGGGGG
CTGCCGGCTCGCTGCGCAGCCGCTGGTGAAGGTGGCGGTGAGGATCTACCCAATTCGTTC
CTATTGGTGACGAAGGGTCGGGCTTCGAGGCGGCGGCCTGGACTGTGAGGGCGGCGTCCT
TCCTACGACGGGAGGCGCCCGCCGGGCGGCTGGCTGTGGCCCTTGGCTGCGTGGGTAGCG
ATGGCACGGAGGAGGTGGTCGCGGCGTGGGGATCCCTGTTCTTCCCCATGGCTAGATCCA
AAGACGGTCACCTGATGGTTACTGCCAATTCCACCAGCTTGTTTGATCTCTGGCGAGTTT
GTCTCCATAGGATCCGGCGATTAGCATGGTGGGAGTTGGACTGGGAGCTTTGTCTAGGGG
AAACCCTTGGTCGGCGCCGGCTGCCACGACATTGGCGGTGCTGCAGTCGCCGGACCCCCC
CCTTGGAGGCGATGTCGAGGTACACCTTGCCCGAGTGAAAACCCCAAATCCTTGGGATTT
GGTGGCGGCGGCGCAATAACGTCATTTCCACCTTAGTGGGGTCGTCTTGGGCGGTGGGTT
GGAGCGTGTGGTGCAGAGAGCTCAAGTGGTTCGTGGAGGCGGTTTAGCCGTGTCTTCGGT
GGCGATGGGACAGTGAGAGCAGGTGGTGTTCACGAAGGAGGAGCGGCATGGCATCTGGCA
TGTCAAGAACGGTGTCTCCTGGCGGCATGGAGCAGCGGGGTCTCGGCGTTGTACGCATGG
TGATGAACGAGCGCGGGATGGTGGCATTGTCTGGCGTTGTGGTGGCGCCGACGGCAGACC
TGGCAAGGTCGATGCGTCAGTACCTGCTCTGAAGATGGATCGGTGAAAGACGGCGGCGAC
GACCTTTGAGAGTGCGTCGGACCGGTGTGTGCCTCAGACCCGGTATGAGGCTTGGTTGGG
GCCTCCGGTTTTAGATGTTAGGTTTTGGTGCGAGGTCTGTTTGGTATTCGGCTCGGACCA
TCGACGCTCCTTCATCAAAAGGTTAGGAGTAGCGACAAATATTGTTAAGATGGTAGCTTG
AGACTTACTGATGTATTACCTTGTAAGGTCTTTGTAAATAATAAATAAAATGGCCGCATG
CATCTCCCAGATGCGGGGTCATCCTCCTTTTTTTTAAAGTTTGGTCATAGTGGTGTGAGG
GGCATGTGCACATAGTAGCATGTCTGGCACTCTAGCTTAGGTTTCACCCTCTTAGCTATC
TCACTAGTTAACTGTTACTAGTTACTTATCTCTCATCTGGAAACCCTTTATTACTCGGGC
ATAATTTAGTTTTTTTTTTGTTTTTTGAATTGACCGAGAAAGAAAAATCTAGGTTCACTT
GGAGAATACTATTTTTGCATTAGATGAAGAAATTATTCCAGCACTGGCTAAATAGCATGA
ACGTGTTATAGTAAAACATAAAGAGAGTAGAGGATGCGATGCCTATGAAACAAGTGTGCG
TTTGGTGCTTGTGCTTGCTGTTGCTTGAGAATGTGAGATGCCTTGTGTCTTCTACTTTAT
CACAACGATGCCTGTTTCCAGAAAAGAAATAAGAATCAAATAAAGGAAAACTCCACCAGC
AGCTACCAGAATCAAATAAAGGAAAGGAATACTCCACCCACAGCTAACGGCTGATCCCTA
CCTCTCCTCCCACGCCTCCTCCCTATCCGCGCCTACATATACCCTCTCCATGCAACCAGC
TCTGGCAAAACAATATACAGAAAAGGAACTCCCATCGAATTCCGTTGCAGCTCGATCGTC
ATCGTCTTCGCAGCTGGGAGCCGCGCCGGTTTCGCATTCGTGAGTAGTACGTATATACTT
CTTCAAGCTAGTTCGCAAACTCTCGCAACAAGTCAACAACTAACATCTGCATCTGGAAAT
GGTTTCAGCTGGGGTTGCGATGGACTTCGCCGTGGACGCTGCGCTGTGGGCGGTGGGCAA
GGCGCTCGCCCCCGTCAAGGACGGCCTGTTGGAGTCATGGGCAGCCAGCACTGAGCTTGG
CCGCAACATCGATGCCCTCAAGATGCAGCTGCTCTATGCGCAAGGGATGCTCGACAGTGC
ACAAGGCAAGGACATCCGCAGCACCGCACTCAAGGAGCTTCTGCACAAGCTGCGGGAGCT
GGCGTACAACACCGACGACGTGCTCGACGAGCTGGAGTACTTCCGCATCCAGGACGCACT
CGATGACACATACCATGCCGCTGCTGACGTGAGTACGCAGGGCGGCTTCATCGGCGGGCT
CGTCCTCAATGCTCGTCACACCGCCTACGCCGTTGGTAAACATTTTTCATGTCACTCTGC
CCCGTCCGTCCAGGATGACAACGCTCATACCGTCATGTTGGAAGAGGAATCTCCCAATAC
GGCAGGAAGTGGACGGCGATTCTTCTGTGGTGCCTGGTCGTCCAAGGCACGGCAGAGAAA
CCAAGCCGTGCAAACACCAAAATTAAAGTTTGATAGGGTGGAAATGTCCAGAAAGATGGT
GGAAATAGTAGACCAGCTGAAACCTCTCTGTGCTATGGTCTCCACCATTCTAAATCTATT
GGGCTCCAACCGCACCACTAGCAAAGACATTACTATGAACAGACCAAAAACCACCCAAGA
AATTGTGGAGCCTGAGTTCTATGGGAGAGATGACCAGAAAAAGGAAATTGTAGATTTTAT
TACACATGGGGAATATTGCAAAGATGAATTGACCGTAGTGCCACTTGTTGGTCCAGGTGG
TATTGGTAAGACAACTCTCACACAACACATATATGGAGAACTAGAGGGCTCTTTCCAAGT
CTCAGTTTGGGTATGCGTTTCCCTGGATTTTAATGCAAATAGGTTGGCACAAGAGATTGC
GAAAAAGATCCCTAAGATTAATGATGAAAAGCAAAATGCTAGTGACATGGAGCTAATTCA
ACAAAGATTAAAATCTAAGAGGCTCTTACTGGTTTTAGACGATATGTGGACATACAACGA
GGATGAGTGGAAAAAACTATTAGCTCCACTAAAACATAAAGGGGGAGAAAAAGGTAACGT
GATTATAGTCACAACTCGAATCCCAGAGGTAGCAAGCATGGTCAGGACGACTAATTCTTC
AATTAGAAATGTGGAACAACTAGGTTATAAAGATATTATGTCTTTTTTTGAGGCATGTGT
ATTTGGTGACCAACAACCATGGAAAGACCATCCTGAATTATCCAATATTGCGAGCAAAAT
AGTGACCAATTTGAAGGGTTTCCCTCTTGCGGCAAAAACTGTAGGTAGATTACTAAGAAA
AAAAATGACACTAGACCATTGGAGAACAATTGCCGGTAGTAGAGAATGGGAATTACAAAC
TGAGCCTAATAATATCATGCCAGCTCTAAAGCTTAGCTATGACTATCTCCCTTTTCATCT
ACAACAATGTTTTTCTTATTGTGCATTGTTTCCAGAAGATTATGAATTTGGTCAGAAAGG
GTTGGTTCACTTCTGGATAGGACTAGGTCTTTTGCATTCTTCTGATTAGAAGAAAAGAAT
CGAAGATGTGGGACTGCACTATTTAGACGACTTGGTTAATTATGGGTTTTTCAAAAAGAA
CGAGAAGGAAGATGGTCAACATTATGTTATTCATGACCTATTGCATGAGTTAGCGGTGAA
GGTTTCATCAGATGAATGTCTTACCATATGTAGTTCTAACGTGAGGTCCATACAAATTCC
TGCATCCATACGCCACTTGTCCATCATTGTAGATAATACTGATGTTGGGGATATATCGAA
TTTTCAAGACTATAAAAGTGACTTGAGTGCACTTGGTGAAAGATTGAGAGTTCGAAACAT
ACGTACTTTGATGTTATTTGGAGAATACCATGGAAGCTTTGCCAAGATGTTTAGGAATCT
GTTTAGGGAAGCTGGAGCCATTCGCACTATTTTTCTGTCTGGAGCATCATATTCTCTGGA
GGATATGTTGCCAAACTTTTCAAAACTTGTCCATCTACGCTACGTAAGGATCAAGTCAGG
GCGTAATCAATACATGTGCTTACCTAGTGCATTGTTAAGATCCTATCATCTAGAGGTAAT
TGATCTAGAAAAATGGGGTGGCAGCTTTGGTTCAATGAGGGATGCGAGCAACCTTGTAAA
ACTGCATCATTTTCATGTGCCAGGAGATAGTCGTGAACTGTACTCTAGCATATACAGGGT
GGGGAAACTTAAATTCCTGGAGGAATTAAGATGCTTTGAAGTTGGAAAAGAGACCGAGGG
TTTTGAGCTAAGTCAACTAGGCAATTTGACAGAGCTGGGAGGATCGCTTGGCATTTATAA
TCTTGAAAAGGTGCACAGAAAAGATGAGGGGAAAGAGCTAAAATTGATTCACAAAAAACA
CCTTCATAAGCTAACATTACAATGGGATAATAACCAATGTGACAAAAATCTAGCACAAGA
ACAAAACGTCATTGAAAGCCTTGTACCCCACAATAATCTTCAAGACCTAAGCATTAGAGG
GCATGGAGGTGCTAATTGCCCATCATGGCTGGGAGGGTCCCTCTCGGTTGAAAACTTAGG
ATCTCTTTCTCTATGTGATGTATCCTGGAACACACTTCCACCTCTAGGGAAGTTCAGGTT
CGTTGATGATCCTAGTGAAGAGTGTCAGAGTCATGCCTCAATCCAATGCTTCCAAACTTT
GAAAAGGGTAGAATGAATTAATATACAAAAAATGGCAAAATGGGTCGGAAACGGCAAATG
TCATTTGTTCTCTCTTCTAGAAGAGATAACTATTATAGGTTGCCTCCAACTCACGGAGTT
GCCATTTTCACATCCTGCTCATGATCAAGCCAAGCAAGAGGAGAACATGACTTGGTTTCC
GAAACTAATGAAGCTCAATATTACGGGCTGCCCCAAATTGGCGTCATTGCCTCCAATCCC
TTGGACTCAAGCTCCGTGCTCTGCTGAGATAAGACGAGCAGGATCAGTATTTGAGAAGCT
TGTTTACTCGAAGAACTACAAATCGGAATTGAGTTTGGAAGTTGAGGGAAAAGATGGTCA
GCATGGTCTGTGGAATGGGTTGGCTTTCCATAATCTAGCTGGTCTGAAAGAGCTGGAGGT
GAACAACTGCCCTCCCCTGCCACTGATCCACCTCCAAAAGCTAAAATCTCTCAAGTCCCT
CACGGTATTCGATATGAGCAACTTGTTGCTGCTGTTTGAATGTGAAAGCTACAATACTGA
ATGCCCGCTTCCAGTTGAACAAATAAAGATCTGGGGCTGTGGTGCTGACGGGAAGGAAAT
GACACAACTGTTATCTCATTTCCCGAAGCTCACTGAGTTGGTACTGACATGTTGTGAGAA
GATAACAGAGCTTGGCGTGGTGGAGCTTCAGACGGAAATGACGACACCGTCATCTTCAGG
TAATGAAATTGAAATTGAGCATGCACAAGCTGGACACCATCAGACAAGAGCAGAGGAAGT
AGAAGAAGCAGTGGCAGGAGGAGAAGGTCTCCTGCTCTTGCCTCGGCAACTACAGGAGTT
GAGCATCTATCACTGCAGCGAGCTGCGGTTGCTCTCCGATTCACTTGGCAAGGACAATGG
TAACCCACGAGGAGGAGGGCTCCAGAGTCTCTCCTCCCTCCAGTCGTTGTTCATATTTGA
TTGCCCCAGGTTCCTCTCGTCCTATCCGTCTTCCGCCTCATCTTGTTTTCCCTTCCCGAC
CTCCCTGCGATGGCTCAGTCTGTCTCGCGTGGAGAGCATGGAGACGCTGACTCCCCTCTC
AAATCTCAGCTCTCTCACCAGTTTAACCGTGTATAATTGTGGGGATCTAAGAGGCGAGGG
TTTATGGCCTCTCGTTGCCCGGGGCCGCCTCACAGAATTAGGCATCTTTGGAACCCGAAA
ATTCTTCACTGGTTCTGAGCCCTCACGGCTGCATGGCCAACAGATTCCTTCCTCTTCATC
CAAATTCGAACATCTCACTACAGATGACTTGACGGGAGTCCTTACCGCGCCCATCTGCAA
ACTCCTCTCTTCCTCCCTTACCGAATTAAGCTTTTGGGAGAATAAAGAGGTGGAGCGCTT
CACAGAGGAGCACGAGGAGGCCCTTCACCTCCTCAATTCTCTCCAGGAACTCGTTTTTTG
GGAAAGTGAGAAGCTGCAGCGCCTCCCTGCAGGGTTAACCCAGCTTGCCAGCCTCAAGAT
ATTACGGATTTCGGAGTGTCCAGCCATCAGATCGCTGCCCAAGGACGGACTGCCAAGTTC
TTTGCAAGAACTAGAGATCAAAGACTGTCCTGCCATCAAATCTCTGCCCAAGGACGGCCT
GCCAAGTTCACTACGGAAATTAGAAGTTTGTAATGGCATCAGCGAGGAGCTTAAAAGGCA
GTGCCGCAAGTTAAAAGGAACCATTCCAGTAATCAAAGACTACCACGACTACGACTAACC
CAAGGTAACAAACAATTCCTTCTCTGTACTTGTCCCACAAATTTCCATTGCTTTTCCTAA
TTAACCCGGTAAGCATAAGAGTCATTCTCTTTTTGTTTACTTCACTGCAGTTATTGTCGT
GCAATCTGAATAACCCACTTATTTTAATCTTTTGTACATTCAGAGGTCTTCTTGGGTTTG
TACATTCTTCTAGCCCAGCCTTGTAGATCCAGTTCTTTCTCTACCCAAGAACAGAAGGTT
CCAGACTATAGATTACTAAACCGGTTAGTATATGAATAATGGTCCCACTACTCACATACA
TCACTTCATGCATTCTTGATCTGTAAGGTTCACACCCGTGAATCCTGATTATACTTAGAT
ATTGATTTATCAGGGGAATCCTTCCCCTTGTGGTATCCTTAATGACTTGGTTGCTTTCTG
GTTTTTCTCAGCTGCAGTGAACCAAACTCTTCTTCACCTTAGACTAGTTGACTCATCAAC
CAGGAACCGCTGTGCTGAATAGCCAATCGGGCCAATCCCGTTAACTTTCACACGGTATGT
TGTGTGTTGTATTCTGATAATATTCTGTTCACTTTAATATCAGGTTGCACTGTATCTACC
TTGGCGAAATGGTGTGGAATACTTACAATTTTACTTGGTAAATTTGTAAACTTGCACAAT
TTCCTTGTGTGTTTTGAGTTGTTCTTACTGTTGAAATTTAACAAATACTTACTTGTTTGT
ATCCATCTCCA